RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 CRBNQ96SW2 442 aa11.78□□□□□ -0.52
SSBP3-215ENST00000533946 BOLA2Q9H3K6 86 aa11.78□□□□□ -0.52
SSBP3-215ENST00000533946 PDHXO00330 501 aa11.77□□□□□ -0.53
SSBP3-215ENST00000533946 PRKAB2O43741 272 aa11.77□□□□□ -0.53
SSBP3-215ENST00000533946 GDF11O95390 407 aa11.77□□□□□ -0.53
SSBP3-215ENST00000533946 MYCP01106 439 aaPredicted RBP11.77□□□□□ -0.53
SSBP3-215ENST00000533946 LDHCP07864 332 aa11.77□□□□□ -0.53
SSBP3-215ENST00000533946 CYP2D6P10635 497 aa11.77□□□□□ -0.53
SSBP3-215ENST00000533946 CETPP11597 493 aa11.77□□□□□ -0.53
SSBP3-215ENST00000533946 GSTO1P78417 241 aa11.77□□□□□ -0.53
SSBP3-215ENST00000533946 SP3Q02447 781 aa11.77□□□□□ -0.53
SSBP3-215ENST00000533946 SNAPC2Q13487 334 aa11.77□□□□□ -0.53
SSBP3-215ENST00000533946 NOM1Q5C9Z4 860 aaKnown RBP11.77□□□□□ -0.53
SSBP3-215ENST00000533946 KIF1BPQ96EK5 621 aa11.77□□□□□ -0.53
SSBP3-215ENST00000533946 RIOK1Q9BRS2 568 aaKnown RBP11.77□□□□□ -0.53
SSBP3-215ENST00000533946 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.77□□□□□ -0.531e-6■■■■■ 31.8
SSBP3-215ENST00000533946 DOCK3Q8IZD9 2030 aa11.77□□□□□ -0.53
SSBP3-215ENST00000533946 CYP2D7A0A087X1C5 515 aa11.76□□□□□ -0.53
SSBP3-215ENST00000533946 POTEFA5A3E0 1075 aa11.76□□□□□ -0.53
SSBP3-215ENST00000533946 MAP4K4O95819 1239 aaPredicted RBP11.76□□□□□ -0.53
SSBP3-215ENST00000533946 ALDH1A1P00352 501 aa11.76□□□□□ -0.53
SSBP3-215ENST00000533946 PDE6AP16499 860 aa11.76□□□□□ -0.53
SSBP3-215ENST00000533946 RGS19P49795 217 aa11.76□□□□□ -0.53
SSBP3-215ENST00000533946 PLCD1P51178 756 aa11.76□□□□□ -0.53
SSBP3-215ENST00000533946 RRP1P56182 461 aaKnown RBP11.76□□□□□ -0.53
SSBP3-215ENST00000533946 POTEEQ6S8J3 1075 aa11.76□□□□□ -0.53
SSBP3-215ENST00000533946 C17orf99Q6UX52 265 aa11.76□□□□□ -0.53
SSBP3-215ENST00000533946 GADL1Q6ZQY3 521 aa11.76□□□□□ -0.53
SSBP3-215ENST00000533946 SLF2Q8IX21 1173 aa11.76□□□□□ -0.53
SSBP3-215ENST00000533946 LCORLQ8N3X6 602 aa11.76□□□□□ -0.53
SSBP3-215ENST00000533946 DDX60LQ5H9U9 1706 aaKnown RBP11.76□□□□□ -0.53
SSBP3-215ENST00000533946 ZNF532Q9HCE3 1301 aa11.76□□□□□ -0.53
SSBP3-215ENST00000533946 BAZ2AQ9UIF9 1905 aaKnown RBP11.76□□□□□ -0.53
SSBP3-215ENST00000533946 KIAA0100Q14667 2235 aaKnown RBP11.75□□□□□ -0.53
SSBP3-215ENST00000533946 A0A0G2JLL6 359 aaPredicted RBP11.75□□□□□ -0.53
SSBP3-215ENST00000533946 TLR2O60603 784 aa11.75□□□□□ -0.53
SSBP3-215ENST00000533946 NPM3O75607 178 aaKnown RBP11.75□□□□□ -0.53
SSBP3-215ENST00000533946 MS4A1P11836 297 aa11.75□□□□□ -0.53
SSBP3-215ENST00000533946 CAP2P40123 477 aa11.75□□□□□ -0.53
SSBP3-215ENST00000533946 SPP2Q13103 211 aa11.75□□□□□ -0.53
SSBP3-215ENST00000533946 FBXO46Q6PJ61 603 aaPredicted RBP11.75□□□□□ -0.53
SSBP3-215ENST00000533946 PRRT2Q7Z6L0 340 aaPredicted RBP11.75□□□□□ -0.53
SSBP3-215ENST00000533946 ERC1Q8IUD2 1116 aa11.75□□□□□ -0.53
SSBP3-215ENST00000533946 SDR42E1Q8WUS8 393 aa11.75□□□□□ -0.53
SSBP3-215ENST00000533946 TRIM47Q96LD4 638 aa11.75□□□□□ -0.53
SSBP3-215ENST00000533946 ARMT1Q9H993 441 aa11.75□□□□□ -0.53
SSBP3-215ENST00000533946 ZFYVE28Q9HCC9 887 aa11.75□□□□□ -0.53
SSBP3-215ENST00000533946 PTPN22Q9Y2R2 807 aa11.75□□□□□ -0.53
SSBP3-215ENST00000533946 PTCH2Q9Y6C5 1203 aa11.75□□□□□ -0.53
SSBP3-215ENST00000533946 TBC1D12O60347 775 aa11.74□□□□□ -0.53
SSBP3-215ENST00000533946 CTNND1O60716 968 aaKnown RBP11.74□□□□□ -0.53
SSBP3-215ENST00000533946 IFIT2P09913 472 aaKnown RBP11.74□□□□□ -0.53
SSBP3-215ENST00000533946 SLC9C2Q5TAH2 1124 aa11.74□□□□□ -0.53
SSBP3-215ENST00000533946 ANKRD23Q86SG2 305 aa11.74□□□□□ -0.53
SSBP3-215ENST00000533946 CLASRPQ8N2M8 674 aaKnown RBP11.74□□□□□ -0.53
SSBP3-215ENST00000533946 SLC44A5Q8NCS7 719 aa11.74□□□□□ -0.53
SSBP3-215ENST00000533946 SH3TC2Q8TF17 1288 aa11.74□□□□□ -0.53
SSBP3-215ENST00000533946 DCTPP1Q9H773 170 aa11.74□□□□□ -0.53
SSBP3-215ENST00000533946 EFCC1Q9HA90 598 aa11.74□□□□□ -0.53
SSBP3-215ENST00000533946 MGAMO43451 1857 aa11.73□□□□□ -0.53
SSBP3-215ENST00000533946 COL2A1P02458 1487 aaPredicted RBP11.73□□□□□ -0.53
SSBP3-215ENST00000533946 BCRP11274 1271 aa11.73□□□□□ -0.53
SSBP3-215ENST00000533946 ATP5JP18859 108 aa11.73□□□□□ -0.53
SSBP3-215ENST00000533946 GUCY1A2P33402 732 aa11.73□□□□□ -0.53
SSBP3-215ENST00000533946 HMGCS2P54868 508 aa11.73□□□□□ -0.53
SSBP3-215ENST00000533946 LACTBP83111 547 aaPredicted RBP11.73□□□□□ -0.53
SSBP3-215ENST00000533946 OTUD7BQ6GQQ9 843 aa11.73□□□□□ -0.53
SSBP3-215ENST00000533946 METTL16Q86W50 562 aaKnown RBP11.73□□□□□ -0.53
SSBP3-215ENST00000533946 CLEC10AQ8IUN9 316 aa11.73□□□□□ -0.53
SSBP3-215ENST00000533946 NAV1Q8NEY1 1877 aa11.73□□□□□ -0.53
SSBP3-215ENST00000533946 HOOK2Q96ED9 719 aa11.73□□□□□ -0.53
SSBP3-215ENST00000533946 DYNLL2Q96FJ2 89 aa11.73□□□□□ -0.53
SSBP3-215ENST00000533946 PICK1Q9NRD5 415 aa11.73□□□□□ -0.53
SSBP3-215ENST00000533946 PAG1Q9NWQ8 432 aa11.73□□□□□ -0.53
SSBP3-215ENST00000533946 GABRQQ9UN88 632 aa11.73□□□□□ -0.53
SSBP3-215ENST00000533946 MYH7P12883 1935 aa11.72□□□□□ -0.53
SSBP3-215ENST00000533946 LOC285556D6RIA3 1793 aa11.72□□□□□ -0.53
SSBP3-215ENST00000533946 CXCL11O14625 94 aa11.72□□□□□ -0.53
SSBP3-215ENST00000533946 RAB11FIP3O75154 756 aa11.72□□□□□ -0.53
SSBP3-215ENST00000533946 HMMRO75330 724 aa11.72□□□□□ -0.53
SSBP3-215ENST00000533946 BAG3O95817 575 aa11.72□□□□□ -0.53
SSBP3-215ENST00000533946 SHMT1P34896 483 aa11.72□□□□□ -0.53
SSBP3-215ENST00000533946 ACER1Q8TDN7 264 aa11.72□□□□□ -0.53
SSBP3-215ENST00000533946 HAUS7Q99871 368 aa11.72□□□□□ -0.53
SSBP3-215ENST00000533946 LRRCC1Q9C099 1032 aa11.72□□□□□ -0.53
SSBP3-215ENST00000533946 PUS7LQ9H0K6 701 aaKnown RBP11.72□□□□□ -0.53
SSBP3-215ENST00000533946 PI4KBQ9UBF8 816 aa11.72□□□□□ -0.53
SSBP3-215ENST00000533946 PDE4DIPQ5VU43 2346 aa11.71□□□□□ -0.53
SSBP3-215ENST00000533946 MAGEB6P1A0A0J9YX57 407 aa11.71□□□□□ -0.53
SSBP3-215ENST00000533946 MBD4O95243 580 aa11.71□□□□□ -0.53
SSBP3-215ENST00000533946 GH2P01242 217 aa11.71□□□□□ -0.53
SSBP3-215ENST00000533946 EN2P19622 333 aaPredicted RBP11.71□□□□□ -0.53
SSBP3-215ENST00000533946 ADD2P35612 726 aa11.71□□□□□ -0.53
SSBP3-215ENST00000533946 PSMC4P43686 418 aa11.71□□□□□ -0.53
SSBP3-215ENST00000533946 USP5P45974 858 aa11.71□□□□□ -0.53
SSBP3-215ENST00000533946 MAP3K12Q12852 859 aa11.71□□□□□ -0.53
SSBP3-215ENST00000533946 MTMR2Q13614 643 aa11.71□□□□□ -0.53
SSBP3-215ENST00000533946 HSP90AB4PQ58FF6 505 aa11.71□□□□□ -0.53
SSBP3-215ENST00000533946 KIAA1755Q5JYT7 1200 aa11.71□□□□□ -0.53
SSBP3-215ENST00000533946 ERO1AQ96HE7 468 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 169.6 ms