RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 JMYQ8N9B5 988 aa18.36■□□□□ 0.53
ATP2C1-224ENST00000533801 CNBD1Q8NA66 436 aa18.36■□□□□ 0.53
ATP2C1-224ENST00000533801 PCDHB6Q9Y5E3 794 aa18.36■□□□□ 0.53
ATP2C1-224ENST00000533801 ZNF804BA4D1E1 1349 aa18.36■□□□□ 0.53
ATP2C1-224ENST00000533801 AFMP43652 599 aa18.36■□□□□ 0.53
ATP2C1-224ENST00000533801 ENGASEQ8NFI3 743 aa18.36■□□□□ 0.53
ATP2C1-224ENST00000533801 IFNKQ9P0W0 207 aa18.36■□□□□ 0.53
ATP2C1-224ENST00000533801 KIAA1468Q9P260 1216 aa18.36■□□□□ 0.53
ATP2C1-224ENST00000533801 RPGRQ92834 1020 aaKnown RBP18.35■□□□□ 0.53
ATP2C1-224ENST00000533801 POLR3EQ9NVU0 708 aa18.35■□□□□ 0.53
ATP2C1-224ENST00000533801 C6orf229H3BNL8 230 aa18.35■□□□□ 0.53
ATP2C1-224ENST00000533801 TMC6Q7Z403 805 aa18.35■□□□□ 0.53
ATP2C1-224ENST00000533801 ENAHQ8N8S7 591 aaPredicted RBP18.35■□□□□ 0.53
ATP2C1-224ENST00000533801 SLC44A5Q8NCS7 719 aa18.35■□□□□ 0.53
ATP2C1-224ENST00000533801 MKNK2Q9HBH9 465 aa18.35■□□□□ 0.53
ATP2C1-224ENST00000533801 NARFQ9UHQ1 456 aa18.35■□□□□ 0.53
ATP2C1-224ENST00000533801 YEATS4O95619 227 aa18.35■□□□□ 0.53
ATP2C1-224ENST00000533801 ZNF174Q15697 407 aa18.35■□□□□ 0.53
ATP2C1-224ENST00000533801 NTRK3Q16288 839 aa18.35■□□□□ 0.53
ATP2C1-224ENST00000533801 NOM1Q5C9Z4 860 aaKnown RBP18.35■□□□□ 0.53
ATP2C1-224ENST00000533801 CLEC4GQ6UXB4 293 aa18.35■□□□□ 0.53
ATP2C1-224ENST00000533801 MAPKAPK5Q8IW41 473 aa18.35■□□□□ 0.53
ATP2C1-224ENST00000533801 CACTINQ8WUQ7 758 aaKnown RBP18.35■□□□□ 0.53
ATP2C1-224ENST00000533801 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.34■□□□□ 0.53
ATP2C1-224ENST00000533801 COBLO75128 1261 aa18.34■□□□□ 0.53
ATP2C1-224ENST00000533801 CASP1P29466 404 aa18.34■□□□□ 0.53
ATP2C1-224ENST00000533801 EVCP57679 992 aa18.34■□□□□ 0.53
ATP2C1-224ENST00000533801 BARGINQ6ZT62 677 aa18.34■□□□□ 0.53
ATP2C1-224ENST00000533801 NOSTRINQ8IVI9 506 aa18.34■□□□□ 0.53
ATP2C1-224ENST00000533801 CRNKL1Q9BZJ0 848 aaKnown RBP18.34■□□□□ 0.53
ATP2C1-224ENST00000533801 NYXQ9GZU5 481 aa18.34■□□□□ 0.53
ATP2C1-224ENST00000533801 CPVLQ9H3G5 476 aa18.34■□□□□ 0.53
ATP2C1-224ENST00000533801 COL14A1Q05707 1796 aaKnown RBP18.34■□□□□ 0.53
ATP2C1-224ENST00000533801 POLR2DO15514 142 aaKnown RBP18.34■□□□□ 0.53
ATP2C1-224ENST00000533801 SERPINC1P01008 464 aa18.34■□□□□ 0.53
ATP2C1-224ENST00000533801 SLC39A14Q15043 492 aa18.34■□□□□ 0.53
ATP2C1-224ENST00000533801 SHC4Q6S5L8 630 aa18.34■□□□□ 0.53
ATP2C1-224ENST00000533801 RASSF8Q8NHQ8 419 aa18.34■□□□□ 0.53
ATP2C1-224ENST00000533801 ZSCAN10Q96SZ4 725 aaPredicted RBP18.34■□□□□ 0.53
ATP2C1-224ENST00000533801 NHSL1Q5SYE7 1610 aa18.34■□□□□ 0.53
ATP2C1-224ENST00000533801 RPS6KA4O75676 772 aa18.34■□□□□ 0.53
ATP2C1-224ENST00000533801 GOLGA8FQ08AF8 430 aa18.34■□□□□ 0.53
ATP2C1-224ENST00000533801 GOLGA8DPQ0D2H9 430 aa18.34■□□□□ 0.53
ATP2C1-224ENST00000533801 TDRD7Q8NHU6 1098 aaKnown RBP18.34■□□□□ 0.53
ATP2C1-224ENST00000533801 TGFBRAP1Q8WUH2 860 aa18.34■□□□□ 0.53
ATP2C1-224ENST00000533801 STAG1Q8WVM7 1258 aa18.34■□□□□ 0.53
ATP2C1-224ENST00000533801 LONRF3Q496Y0 759 aa18.33■□□□□ 0.53
ATP2C1-224ENST00000533801 USP49Q70CQ1 688 aa18.33■□□□□ 0.53
ATP2C1-224ENST00000533801 VAT1LQ9HCJ6 419 aa18.33■□□□□ 0.53
ATP2C1-224ENST00000533801 CCDC196A0A1B0GTZ2 297 aa18.33■□□□□ 0.52
ATP2C1-224ENST00000533801 TRMT44Q8IYL2 757 aaKnown RBP18.33■□□□□ 0.52
ATP2C1-224ENST00000533801 CTCFLQ8NI51 663 aaPredicted RBP18.33■□□□□ 0.52
ATP2C1-224ENST00000533801 ZNF384Q8TF68 577 aa18.33■□□□□ 0.52
ATP2C1-224ENST00000533801 KCNH3Q9ULD8 1083 aa18.33■□□□□ 0.52
ATP2C1-224ENST00000533801 AKAP11Q9UKA4 1901 aa18.33■□□□□ 0.52
ATP2C1-224ENST00000533801 FMNL1O95466 1100 aaPredicted RBP18.33■□□□□ 0.52
ATP2C1-224ENST00000533801 ATP1A3P13637 1013 aa18.33■□□□□ 0.52
ATP2C1-224ENST00000533801 LIFRP42702 1097 aa18.33■□□□□ 0.52
ATP2C1-224ENST00000533801 IQCB1Q15051 598 aa18.33■□□□□ 0.52
ATP2C1-224ENST00000533801 CTR9Q6PD62 1173 aa18.33■□□□□ 0.52
ATP2C1-224ENST00000533801 DHX58Q96C10 678 aa18.33■□□□□ 0.52
ATP2C1-224ENST00000533801 UFL1O94874 794 aa18.32■□□□□ 0.52
ATP2C1-224ENST00000533801 GRIK5Q16478 980 aa18.32■□□□□ 0.52
ATP2C1-224ENST00000533801 CRACR2BQ8N4Y2 399 aaPredicted RBP18.32■□□□□ 0.52
ATP2C1-224ENST00000533801 WASF1Q92558 559 aa18.32■□□□□ 0.52
ATP2C1-224ENST00000533801 PAPPAQ13219 1627 aa18.32■□□□□ 0.52
ATP2C1-224ENST00000533801 CDK11BP21127 795 aaKnown RBP18.32■□□□□ 0.52
ATP2C1-224ENST00000533801 AXDND1Q5T1B0 1012 aaPredicted RBP18.32■□□□□ 0.52
ATP2C1-224ENST00000533801 HOMER1Q86YM7 354 aa18.32■□□□□ 0.52
ATP2C1-224ENST00000533801 GPKOWQ92917 476 aaPredicted RBP eCLIP18.32■□□□□ 0.525e-6■■□□□ 13.8
ATP2C1-224ENST00000533801 NOL10Q9BSC4 688 aaKnown RBP18.32■□□□□ 0.52
ATP2C1-224ENST00000533801 LDHBP07195 334 aaKnown RBP18.31■□□□□ 0.52
ATP2C1-224ENST00000533801 TPM2P07951 284 aa18.31■□□□□ 0.52
ATP2C1-224ENST00000533801 GOLGA8HP0CJ92 632 aa18.31■□□□□ 0.52
ATP2C1-224ENST00000533801 SF3B3Q15393 1217 aaKnown RBP18.31■□□□□ 0.52
ATP2C1-224ENST00000533801 CFAP100Q494V2 611 aa18.31■□□□□ 0.52
ATP2C1-224ENST00000533801 SGMS1Q86VZ5 419 aa18.31■□□□□ 0.52
ATP2C1-224ENST00000533801 DHX40Q8IX18 779 aaKnown RBP18.31■□□□□ 0.52
ATP2C1-224ENST00000533801 NSUN4Q96CB9 384 aaKnown RBP18.31■□□□□ 0.52
ATP2C1-224ENST00000533801 RIOK1Q9BRS2 568 aaKnown RBP18.31■□□□□ 0.52
ATP2C1-224ENST00000533801 IFNAR1P17181 557 aa18.31■□□□□ 0.52
ATP2C1-224ENST00000533801 NLRP5P59047 1200 aa18.31■□□□□ 0.52
ATP2C1-224ENST00000533801 ALX1Q15699 326 aa18.31■□□□□ 0.52
ATP2C1-224ENST00000533801 ATL3Q6DD88 541 aa18.31■□□□□ 0.52
ATP2C1-224ENST00000533801 RASGRP4Q8TDF6 673 aa18.31■□□□□ 0.52
ATP2C1-224ENST00000533801 TRIM37O94972 964 aa18.31■□□□□ 0.52
ATP2C1-224ENST00000533801 DEXIO95424 95 aa18.31■□□□□ 0.52
ATP2C1-224ENST00000533801 XBP1P17861 261 aa18.31■□□□□ 0.52
ATP2C1-224ENST00000533801 TPM4P67936 248 aa18.31■□□□□ 0.52
ATP2C1-224ENST00000533801 PICALMQ13492 652 aa18.31■□□□□ 0.52
ATP2C1-224ENST00000533801 XPO4Q9C0E2 1151 aaKnown RBP18.31■□□□□ 0.52
ATP2C1-224ENST00000533801 USP17L3A6NCW0 530 aa18.3■□□□□ 0.52
ATP2C1-224ENST00000533801 USP17L4A6NCW7 530 aa18.3■□□□□ 0.52
ATP2C1-224ENST00000533801 MMP1P03956 469 aa18.3■□□□□ 0.52
ATP2C1-224ENST00000533801 VEGFAP15692 232 aaPredicted RBP18.3■□□□□ 0.52
ATP2C1-224ENST00000533801 CDC25AP30304 524 aa18.3■□□□□ 0.52
ATP2C1-224ENST00000533801 RASGRP2Q7LDG7 609 aa18.3■□□□□ 0.52
ATP2C1-224ENST00000533801 USP17L1Q7RTZ2 530 aa18.3■□□□□ 0.52
ATP2C1-224ENST00000533801 KRI1Q8N9T8 703 aaKnown RBP18.3■□□□□ 0.52
ATP2C1-224ENST00000533801 PLIN2Q99541 437 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms