RNA–Protein interactions for RNA: ENST00000530459.1

GMDS-207, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-207ENST00000530459 DDX12PQ92771 950 aa5.7□□□□□ -1.5
GMDS-207ENST00000530459 UPF1Q92900 1129 aaKnown RBP eCLIP5.7□□□□□ -1.5
GMDS-207ENST00000530459 SMARCC1Q92922 1105 aaPredicted RBP5.7□□□□□ -1.5
GMDS-207ENST00000530459 MS4A3Q96HJ5 214 aa5.7□□□□□ -1.5
GMDS-207ENST00000530459 NAPGQ99747 312 aaPredicted RBP5.7□□□□□ -1.5
GMDS-207ENST00000530459 MRPL44Q9H9J2 332 aaKnown RBP5.7□□□□□ -1.5
GMDS-207ENST00000530459 DACH1Q9UI36 760 aa5.7□□□□□ -1.5
GMDS-207ENST00000530459 PTPRUQ92729 1446 aa5.7□□□□□ -1.5
GMDS-207ENST00000530459 ITIH6Q6UXX5 1313 aa5.7□□□□□ -1.5
GMDS-207ENST00000530459 WDR17Q8IZU2 1322 aa5.7□□□□□ -1.5
GMDS-207ENST00000530459 IGSF1Q8N6C5 1336 aa5.7□□□□□ -1.5
GMDS-207ENST00000530459 DDX60Q8IY21 1712 aaKnown RBP5.69□□□□□ -1.5
GMDS-207ENST00000530459 A0A087WWV3 80 aa5.69□□□□□ -1.5
GMDS-207ENST00000530459 KLHL33A6NCF5 533 aa5.69□□□□□ -1.5
GMDS-207ENST00000530459 TMEM232C9JQI7 657 aa5.69□□□□□ -1.5
GMDS-207ENST00000530459 AKR1B15C9JRZ8 316 aaPredicted RBP5.69□□□□□ -1.5
GMDS-207ENST00000530459 GOLIM4O00461 696 aa5.69□□□□□ -1.5
GMDS-207ENST00000530459 MEFVO15553 781 aaPredicted RBP5.69□□□□□ -1.5
GMDS-207ENST00000530459 NBPF7P0C2Y1 421 aaPredicted RBP5.69□□□□□ -1.5
GMDS-207ENST00000530459 PFKFB1P16118 471 aa5.69□□□□□ -1.5
GMDS-207ENST00000530459 ATP5JP18859 108 aa5.69□□□□□ -1.5
GMDS-207ENST00000530459 ERCC5P28715 1186 aaPredicted RBP5.69□□□□□ -1.5
GMDS-207ENST00000530459 SARSP49591 514 aaKnown RBP5.69□□□□□ -1.5
GMDS-207ENST00000530459 LIG3P49916 1009 aa5.69□□□□□ -1.5
GMDS-207ENST00000530459 STK3Q13188 491 aa5.69□□□□□ -1.5
GMDS-207ENST00000530459 STIM1Q13586 685 aa5.69□□□□□ -1.5
GMDS-207ENST00000530459 RRS1Q15050 365 aaKnown RBP5.69□□□□□ -1.5
GMDS-207ENST00000530459 SF3A1Q15459 793 aaKnown RBP5.69□□□□□ -1.5
GMDS-207ENST00000530459 TAF7Q15545 349 aaPredicted RBP5.69□□□□□ -1.5
GMDS-207ENST00000530459 PLEKHO1Q53GL0 409 aaPredicted RBP5.69□□□□□ -1.5
GMDS-207ENST00000530459 NBPF14Q5TI25 921 aa5.69□□□□□ -1.5
GMDS-207ENST00000530459 NUTM2DQ5VT03 806 aaPredicted RBP5.69□□□□□ -1.5
GMDS-207ENST00000530459 LRCH2Q5VUJ6 765 aa5.69□□□□□ -1.5
GMDS-207ENST00000530459 MYSM1Q5VVJ2 828 aa5.69□□□□□ -1.5
GMDS-207ENST00000530459 ANO1Q5XXA6 986 aa5.69□□□□□ -1.5
GMDS-207ENST00000530459 NUTM2AQ8IVF1 878 aaPredicted RBP5.69□□□□□ -1.5
GMDS-207ENST00000530459 ANKRD18AQ8IVF6 992 aa5.69□□□□□ -1.5
GMDS-207ENST00000530459 TEX11Q8IYF3 940 aa5.69□□□□□ -1.5
GMDS-207ENST00000530459 C3orf20Q8ND61 904 aa5.69□□□□□ -1.5
GMDS-207ENST00000530459 GIMAP7Q8NHV1 300 aa5.69□□□□□ -1.5
GMDS-207ENST00000530459 FAXDC2Q96IV6 333 aa5.69□□□□□ -1.5
GMDS-207ENST00000530459 DSCC1Q9BVC3 393 aa5.69□□□□□ -1.5
GMDS-207ENST00000530459 FTOQ9C0B1 505 aaKnown RBP eCLIP5.69□□□□□ -1.5
GMDS-207ENST00000530459 VEZTQ9HBM0 779 aa5.69□□□□□ -1.5
GMDS-207ENST00000530459 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.69□□□□□ -1.5
GMDS-207ENST00000530459 FANCLQ9NW38 375 aa5.69□□□□□ -1.5
GMDS-207ENST00000530459 KCNG1Q9UIX4 513 aa5.69□□□□□ -1.5
GMDS-207ENST00000530459 KDM3BQ7LBC6 1761 aa5.69□□□□□ -1.5
GMDS-207ENST00000530459 GRIN2DO15399 1336 aa5.69□□□□□ -1.5
GMDS-207ENST00000530459 MAP3K19Q56UN5 1328 aa5.69□□□□□ -1.5
GMDS-207ENST00000530459 SH3TC1Q8TE82 1336 aa5.69□□□□□ -1.5
GMDS-207ENST00000530459 DIP2CQ9Y2E4 1556 aa5.68□□□□□ -1.5
GMDS-207ENST00000530459 AGPSO00116 658 aa5.68□□□□□ -1.5
GMDS-207ENST00000530459 PSMD14O00487 310 aa5.68□□□□□ -1.5
GMDS-207ENST00000530459 OPA1O60313 960 aa5.68□□□□□ -1.5
GMDS-207ENST00000530459 RTN2O75298 545 aa5.68□□□□□ -1.5
GMDS-207ENST00000530459 RASSF9O75901 435 aa5.68□□□□□ -1.5
GMDS-207ENST00000530459 SASH1O94885 1247 aa5.68□□□□□ -1.5
GMDS-207ENST00000530459 CYP21A2P08686 494 aa5.68□□□□□ -1.5
GMDS-207ENST00000530459 FDPSP14324 419 aaKnown RBP5.68□□□□□ -1.5
GMDS-207ENST00000530459 HSP90B1P14625 803 aaKnown RBP5.68□□□□□ -1.5
GMDS-207ENST00000530459 TNFRSF8P28908 595 aa5.68□□□□□ -1.5
GMDS-207ENST00000530459 PDIA3P30101 505 aaKnown RBP5.68□□□□□ -1.5
GMDS-207ENST00000530459 RDXP35241 583 aaKnown RBP5.68□□□□□ -1.5
GMDS-207ENST00000530459 SYKP43405 635 aa5.68□□□□□ -1.5
GMDS-207ENST00000530459 CCT5P48643 541 aa5.68□□□□□ -1.5
GMDS-207ENST00000530459 SLC8A3P57103 927 aa5.68□□□□□ -1.5
GMDS-207ENST00000530459 MDM2Q00987 491 aaPredicted RBP5.68□□□□□ -1.5
GMDS-207ENST00000530459 APBA1Q02410 837 aa5.68□□□□□ -1.5
GMDS-207ENST00000530459 MAP2K1Q02750 393 aaPredicted RBP5.68□□□□□ -1.5
GMDS-207ENST00000530459 CEBPZQ03701 1054 aaKnown RBP5.68□□□□□ -1.5
GMDS-207ENST00000530459 ICA1Q05084 483 aa5.68□□□□□ -1.5
GMDS-207ENST00000530459 CKAP4Q07065 602 aaKnown RBP5.68□□□□□ -1.5
GMDS-207ENST00000530459 OS9Q13438 667 aaPredicted RBP5.68□□□□□ -1.5
GMDS-207ENST00000530459 ZNF569Q5MCW4 686 aa5.68□□□□□ -1.5
GMDS-207ENST00000530459 RESP18Q5W5W9 173 aa5.68□□□□□ -1.5
GMDS-207ENST00000530459 PAPD7Q5XG87 772 aaKnown RBP5.68□□□□□ -1.5
GMDS-207ENST00000530459 ALS2CLQ60I27 953 aa5.68□□□□□ -1.5
GMDS-207ENST00000530459 RAD9BQ6WBX8 426 aa5.68□□□□□ -1.5
GMDS-207ENST00000530459 CCNI2Q6ZMN8 369 aaPredicted RBP5.68□□□□□ -1.5
GMDS-207ENST00000530459 APTXQ7Z2E3 356 aaKnown RBP5.68□□□□□ -1.5
GMDS-207ENST00000530459 TRAPPC11Q7Z392 1133 aa5.68□□□□□ -1.5
GMDS-207ENST00000530459 ZNF572Q7Z3I7 529 aaPredicted RBP5.68□□□□□ -1.5
GMDS-207ENST00000530459 ZNF589Q86UQ0 364 aaPredicted RBP5.68□□□□□ -1.5
GMDS-207ENST00000530459 AACSQ86V21 672 aa5.68□□□□□ -1.5
GMDS-207ENST00000530459 TMTC1Q8IUR5 882 aa5.68□□□□□ -1.5
GMDS-207ENST00000530459 CNGA4Q8IV77 575 aa5.68□□□□□ -1.5
GMDS-207ENST00000530459 FAM177A1Q8N128 213 aaPredicted RBP5.68□□□□□ -1.5
GMDS-207ENST00000530459 KCTD17Q8N5Z5 321 aa5.68□□□□□ -1.5
GMDS-207ENST00000530459 MAB21L3Q8N8X9 362 aa5.68□□□□□ -1.5
GMDS-207ENST00000530459 DDX54Q8TDD1 881 aaKnown RBP5.68□□□□□ -1.5
GMDS-207ENST00000530459 ZKSCAN4Q969J2 545 aaPredicted RBP5.68□□□□□ -1.5
GMDS-207ENST00000530459 EAF2Q96CJ1 260 aaPredicted RBP5.68□□□□□ -1.5
GMDS-207ENST00000530459 NUDT16Q96DE0 195 aaKnown RBP5.68□□□□□ -1.5
GMDS-207ENST00000530459 TCEANC2Q96MN5 208 aa5.68□□□□□ -1.5
GMDS-207ENST00000530459 CLIC6Q96NY7 704 aa5.68□□□□□ -1.5
GMDS-207ENST00000530459 FSD1Q9BTV5 496 aa5.68□□□□□ -1.5
GMDS-207ENST00000530459 CAPS2Q9BXY5 557 aa5.68□□□□□ -1.5
GMDS-207ENST00000530459 KAT14Q9H8E8 782 aa5.68□□□□□ -1.5
GMDS-207ENST00000530459 ACTR5Q9H9F9 607 aaPredicted RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms