RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 SAP30BPQ9UHR5 308 aaKnown RBP15.3■□□□□ 0.04
CCDC90B-216ENST00000529856 INHBEP58166 350 aa15.29■□□□□ 0.04
CCDC90B-216ENST00000529856 SREBF2Q12772 1141 aa15.29■□□□□ 0.04
CCDC90B-216ENST00000529856 METTL16Q86W50 562 aaKnown RBP15.29■□□□□ 0.04
CCDC90B-216ENST00000529856 PLEKHM2Q8IWE5 1019 aa15.29■□□□□ 0.04
CCDC90B-216ENST00000529856 PUS7LQ9H0K6 701 aaKnown RBP15.29■□□□□ 0.04
CCDC90B-216ENST00000529856 ARMT1Q9H993 441 aa15.29■□□□□ 0.04
CCDC90B-216ENST00000529856 RNF186Q9NXI6 227 aa15.29■□□□□ 0.04
CCDC90B-216ENST00000529856 HERC5Q9UII4 1024 aaKnown RBP15.29■□□□□ 0.04
CCDC90B-216ENST00000529856 MYH1P12882 1939 aa15.28■□□□□ 0.04
CCDC90B-216ENST00000529856 FAM196BA6NMK8 535 aa15.28■□□□□ 0.04
CCDC90B-216ENST00000529856 CTNND1O60716 968 aaKnown RBP15.28■□□□□ 0.04
CCDC90B-216ENST00000529856 MBD4O95243 580 aa15.28■□□□□ 0.04
CCDC90B-216ENST00000529856 HSPA8P11142 646 aaKnown RBP15.28■□□□□ 0.04
CCDC90B-216ENST00000529856 PPATQ06203 517 aa15.28■□□□□ 0.04
CCDC90B-216ENST00000529856 LRRFIP1Q32MZ4 808 aaKnown RBP15.28■□□□□ 0.04
CCDC90B-216ENST00000529856 SCYL3Q8IZE3 742 aa15.28■□□□□ 0.04
CCDC90B-216ENST00000529856 OTUD5Q96G74 571 aa15.28■□□□□ 0.04
CCDC90B-216ENST00000529856 OSBPL3Q9H4L5 887 aa15.28■□□□□ 0.04
CCDC90B-216ENST00000529856 SAGE1Q9NXZ1 904 aa15.28■□□□□ 0.04
CCDC90B-216ENST00000529856 SIPA1L1O43166 1804 aa15.27■□□□□ 0.04
CCDC90B-216ENST00000529856 LAMB1P07942 1786 aa15.27■□□□□ 0.04
CCDC90B-216ENST00000529856 TESPA1A2RU30 521 aaPredicted RBP15.27■□□□□ 0.04
CCDC90B-216ENST00000529856 TRPA1O75762 1119 aa15.27■□□□□ 0.04
CCDC90B-216ENST00000529856 HLA-DOAP06340 250 aa15.27■□□□□ 0.04
CCDC90B-216ENST00000529856 PPIL2Q13356 520 aa15.27■□□□□ 0.04
CCDC90B-216ENST00000529856 APPBP2Q92624 585 aa15.27■□□□□ 0.04
CCDC90B-216ENST00000529856 OSBP2Q969R2 916 aa15.27■□□□□ 0.04
CCDC90B-216ENST00000529856 EVI5LQ96CN4 794 aa15.27■□□□□ 0.04
CCDC90B-216ENST00000529856 MS4A4AQ96JQ5 239 aa15.27■□□□□ 0.04
CCDC90B-216ENST00000529856 FSD1Q9BTV5 496 aa15.27■□□□□ 0.04
CCDC90B-216ENST00000529856 DCP1AQ9NPI6 582 aaPredicted RBP15.27■□□□□ 0.04
CCDC90B-216ENST00000529856 ATP8A2Q9NTI2 1148 aa15.27■□□□□ 0.04
CCDC90B-216ENST00000529856 IRF6O14896 467 aa15.26■□□□□ 0.03
CCDC90B-216ENST00000529856 PRKAB2O43741 272 aa15.26■□□□□ 0.03
CCDC90B-216ENST00000529856 PTPRAP18433 802 aa15.26■□□□□ 0.03
CCDC90B-216ENST00000529856 GTF2A2P52657 109 aa15.26■□□□□ 0.03
CCDC90B-216ENST00000529856 LBX1P52954 281 aa15.26■□□□□ 0.03
CCDC90B-216ENST00000529856 TTC6Q86TZ1 520 aa15.26■□□□□ 0.03
CCDC90B-216ENST00000529856 SDR42E1Q8WUS8 393 aa15.26■□□□□ 0.03
CCDC90B-216ENST00000529856 STRBPQ96SI9 672 aaKnown RBP15.26■□□□□ 0.03
CCDC90B-216ENST00000529856 DNAJC18Q9H819 358 aa15.26■□□□□ 0.03
CCDC90B-216ENST00000529856 PICK1Q9NRD5 415 aa15.26■□□□□ 0.03
CCDC90B-216ENST00000529856 MCM9Q9NXL9 1143 aa15.26■□□□□ 0.03
CCDC90B-216ENST00000529856 TSKSQ9UJT2 592 aa15.26■□□□□ 0.03
CCDC90B-216ENST00000529856 POLR3DP05423 398 aaPredicted RBP15.25■□□□□ 0.03
CCDC90B-216ENST00000529856 CAP2P40123 477 aa15.25■□□□□ 0.03
CCDC90B-216ENST00000529856 RRP1BQ14684 758 aaKnown RBP15.25■□□□□ 0.03
CCDC90B-216ENST00000529856 SLC4A8Q2Y0W8 1093 aa15.25■□□□□ 0.03
CCDC90B-216ENST00000529856 IFNL1Q8IU54 200 aa15.25■□□□□ 0.03
CCDC90B-216ENST00000529856 CRACR2BQ8N4Y2 399 aaPredicted RBP15.25■□□□□ 0.03
CCDC90B-216ENST00000529856 PTPN18Q99952 460 aa15.25■□□□□ 0.03
CCDC90B-216ENST00000529856 TRIM34Q9BYJ4 488 aa15.25■□□□□ 0.03
CCDC90B-216ENST00000529856 EHD4Q9H223 541 aa15.25■□□□□ 0.03
CCDC90B-216ENST00000529856 PRDM10Q9NQV6 1147 aa15.25■□□□□ 0.03
CCDC90B-216ENST00000529856 SLC4A4Q9Y6R1 1079 aa15.25■□□□□ 0.03
CCDC90B-216ENST00000529856 IGF2BP3O00425 579 aaKnown RBP eCLIP15.24■□□□□ 0.03
CCDC90B-216ENST00000529856 PLCD1P51178 756 aa15.24■□□□□ 0.03
CCDC90B-216ENST00000529856 SNAPC2Q13487 334 aa15.24■□□□□ 0.03
CCDC90B-216ENST00000529856 ZMYM1Q5SVZ6 1142 aa15.24■□□□□ 0.03
CCDC90B-216ENST00000529856 TICAM2Q86XR7 235 aa15.24■□□□□ 0.03
CCDC90B-216ENST00000529856 BRI3BPQ8WY22 251 aa15.24■□□□□ 0.03
CCDC90B-216ENST00000529856 SERPINB13Q9UIV8 391 aa15.24■□□□□ 0.03
CCDC90B-216ENST00000529856 KCNH4Q9UQ05 1017 aa15.24■□□□□ 0.03
CCDC90B-216ENST00000529856 DOCK1Q14185 1865 aa15.23■□□□□ 0.03
CCDC90B-216ENST00000529856 NAV1Q8NEY1 1877 aa15.23■□□□□ 0.03
CCDC90B-216ENST00000529856 CCL15-CCL14A0A0B4J2E2 113 aa15.23■□□□□ 0.03
CCDC90B-216ENST00000529856 M0R2C6 588 aa15.23■□□□□ 0.03
CCDC90B-216ENST00000529856 ALDH1A1P00352 501 aa15.23■□□□□ 0.03
CCDC90B-216ENST00000529856 CETPP11597 493 aa15.23■□□□□ 0.03
CCDC90B-216ENST00000529856 PDE4AP27815 886 aa15.23■□□□□ 0.03
CCDC90B-216ENST00000529856 CCL15Q16663 113 aa15.23■□□□□ 0.03
CCDC90B-216ENST00000529856 OTUD7BQ6GQQ9 843 aa15.23■□□□□ 0.03
CCDC90B-216ENST00000529856 TATDN1Q6P1N9 297 aa15.23■□□□□ 0.03
CCDC90B-216ENST00000529856 CFHR5Q9BXR6 569 aa15.23■□□□□ 0.03
CCDC90B-216ENST00000529856 AFG3L2Q9Y4W6 797 aa15.23■□□□□ 0.03
CCDC90B-216ENST00000529856 ZHX2Q9Y6X8 837 aa15.23■□□□□ 0.03
CCDC90B-216ENST00000529856 DDX60LQ5H9U9 1706 aaKnown RBP15.23■□□□□ 0.03
CCDC90B-216ENST00000529856 GSG1L2A8MUP6 293 aa15.22■□□□□ 0.03
CCDC90B-216ENST00000529856 TRIM6-TRIM34B2RNG4 842 aa15.22■□□□□ 0.03
CCDC90B-216ENST00000529856 CXCL11O14625 94 aa15.22■□□□□ 0.03
CCDC90B-216ENST00000529856 GPAA1O43292 621 aa15.22■□□□□ 0.03
CCDC90B-216ENST00000529856 TBC1D8O95759 1140 aa15.22■□□□□ 0.03
CCDC90B-216ENST00000529856 GNAT2P19087 354 aa15.22■□□□□ 0.03
CCDC90B-216ENST00000529856 GABPAQ06546 454 aa15.22■□□□□ 0.03
CCDC90B-216ENST00000529856 GIMAP6Q6P9H5 292 aa15.22■□□□□ 0.03
CCDC90B-216ENST00000529856 DDRGK1Q96HY6 314 aa15.22■□□□□ 0.03
CCDC90B-216ENST00000529856 SEC62Q99442 399 aaKnown RBP15.22■□□□□ 0.03
CCDC90B-216ENST00000529856 BAZ2AQ9UIF9 1905 aaKnown RBP15.21■□□□□ 0.03
CCDC90B-216ENST00000529856 USP17L12C9JPN9 530 aa15.21■□□□□ 0.03
CCDC90B-216ENST00000529856 USP17L21D6R901 530 aa15.21■□□□□ 0.03
CCDC90B-216ENST00000529856 CYP2D6P10635 497 aa15.21■□□□□ 0.03
CCDC90B-216ENST00000529856 JAG1P78504 1218 aa15.21■□□□□ 0.03
CCDC90B-216ENST00000529856 EVX2Q03828 476 aa15.21■□□□□ 0.03
CCDC90B-216ENST00000529856 COL13A1Q5TAT6 717 aaPredicted RBP15.21■□□□□ 0.03
CCDC90B-216ENST00000529856 C12orf60Q5U649 245 aa15.21■□□□□ 0.03
CCDC90B-216ENST00000529856 RILPL2Q969X0 211 aa15.21■□□□□ 0.03
CCDC90B-216ENST00000529856 GINM1Q9NU53 330 aa15.21■□□□□ 0.03
CCDC90B-216ENST00000529856 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.21■□□□□ 0.03
CCDC90B-216ENST00000529856 TAOK2Q9UL54 1235 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms