RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 PROCA1Q8NCQ7 364 aaPredicted RBP8.86□□□□□ -0.99
ITGB1-218ENST00000528877 DCPSQ96C86 337 aaKnown RBP8.86□□□□□ -0.99
ITGB1-218ENST00000528877 ZBED3Q96IU2 234 aaPredicted RBP8.86□□□□□ -0.99
ITGB1-218ENST00000528877 API5Q9BZZ5 524 aaKnown RBP8.86□□□□□ -0.99
ITGB1-218ENST00000528877 CD209Q9NNX6 404 aa8.86□□□□□ -0.99
ITGB1-218ENST00000528877 ABT1Q9ULW3 272 aaKnown RBP8.86□□□□□ -0.99
ITGB1-218ENST00000528877 CHMP3Q9Y3E7 222 aa8.86□□□□□ -0.99
ITGB1-218ENST00000528877 RIPOR2Q9Y4F9 1068 aa8.86□□□□□ -0.99
ITGB1-218ENST00000528877 ECM29Q5VYK3 1845 aa8.86□□□□□ -0.99
ITGB1-218ENST00000528877 TAF5LO75529 589 aa8.85□□□□□ -0.99
ITGB1-218ENST00000528877 VARSP26640 1264 aaKnown RBP8.85□□□□□ -0.99
ITGB1-218ENST00000528877 CTC1Q2NKJ3 1217 aa8.85□□□□□ -0.99
ITGB1-218ENST00000528877 OGFOD1Q8N543 542 aa8.85□□□□□ -0.99
ITGB1-218ENST00000528877 MTMR14Q8NCE2 650 aa8.85□□□□□ -0.99
ITGB1-218ENST00000528877 BAP1Q92560 729 aa8.85□□□□□ -0.99
ITGB1-218ENST00000528877 GPKOWQ92917 476 aaPredicted RBP eCLIP8.85□□□□□ -0.992e-6■■■■□ 21.7
ITGB1-218ENST00000528877 ZNF594Q96JF6 807 aaPredicted RBP8.85□□□□□ -0.99
ITGB1-218ENST00000528877 CAPNS2Q96L46 248 aa8.85□□□□□ -0.99
ITGB1-218ENST00000528877 CNNM1Q9NRU3 951 aa8.85□□□□□ -0.99
ITGB1-218ENST00000528877 MAP10Q9P2G4 905 aa8.85□□□□□ -0.99
ITGB1-218ENST00000528877 ASTN2O75129 1339 aaPredicted RBP8.84□□□□□ -0.99
ITGB1-218ENST00000528877 FAM205AQ6ZU69 1335 aa8.84□□□□□ -0.99
ITGB1-218ENST00000528877 ADM5C9JUS6 153 aa8.84□□□□□ -0.99
ITGB1-218ENST00000528877 SNAP23O00161 211 aa8.84□□□□□ -0.99
ITGB1-218ENST00000528877 WNT10BO00744 389 aa8.84□□□□□ -0.99
ITGB1-218ENST00000528877 AVPP01185 164 aa8.84□□□□□ -0.99
ITGB1-218ENST00000528877 MAP2K2P36507 400 aa8.84□□□□□ -0.99
ITGB1-218ENST00000528877 RFX5P48382 616 aaPredicted RBP8.84□□□□□ -0.99
ITGB1-218ENST00000528877 FKBP1BP68106 108 aa8.84□□□□□ -0.99
ITGB1-218ENST00000528877 MAP2K1Q02750 393 aaPredicted RBP8.84□□□□□ -0.99
ITGB1-218ENST00000528877 SCARF1Q14162 830 aa8.84□□□□□ -0.99
ITGB1-218ENST00000528877 ANGEL2Q5VTE6 544 aaKnown RBP8.84□□□□□ -0.99
ITGB1-218ENST00000528877 INTS3Q68E01 1043 aaKnown RBP8.84□□□□□ -0.99
ITGB1-218ENST00000528877 TTLL5Q6EMB2 1281 aa8.84□□□□□ -0.99
ITGB1-218ENST00000528877 TREML4Q6UXN2 200 aa8.84□□□□□ -0.99
ITGB1-218ENST00000528877 USP48Q86UV5 1035 aa8.84□□□□□ -0.99
ITGB1-218ENST00000528877 CRIPAKQ8N1N5 446 aa8.84□□□□□ -0.99
ITGB1-218ENST00000528877 CERS5Q8N5B7 392 aa8.84□□□□□ -0.99
ITGB1-218ENST00000528877 PNMA1Q8ND90 353 aa8.84□□□□□ -0.99
ITGB1-218ENST00000528877 IL27Q8NEV9 243 aa8.84□□□□□ -0.99
ITGB1-218ENST00000528877 NOB1Q9ULX3 412 aaKnown RBP8.84□□□□□ -0.99
ITGB1-218ENST00000528877 LAMB1P07942 1786 aa8.84□□□□□ -1
ITGB1-218ENST00000528877 ZBED9Q6R2W3 1325 aa8.83□□□□□ -1
ITGB1-218ENST00000528877 SASH1O94885 1247 aa8.83□□□□□ -1
ITGB1-218ENST00000528877 UBTFL1P0CB47 393 aaPredicted RBP8.83□□□□□ -1
ITGB1-218ENST00000528877 GTF2IP78347 998 aa8.83□□□□□ -1
ITGB1-218ENST00000528877 MTX1Q13505 466 aa8.83□□□□□ -1
ITGB1-218ENST00000528877 LINC01559Q495D7 138 aa8.83□□□□□ -1
ITGB1-218ENST00000528877 CYP4F22Q6NT55 531 aa8.83□□□□□ -1
ITGB1-218ENST00000528877 BPHLQ86WA6 291 aaPredicted RBP8.83□□□□□ -1
ITGB1-218ENST00000528877 TDRD7Q8NHU6 1098 aaKnown RBP8.83□□□□□ -1
ITGB1-218ENST00000528877 CDCA5Q96FF9 252 aa8.83□□□□□ -1
ITGB1-218ENST00000528877 MXD3Q9BW11 206 aa8.83□□□□□ -1
ITGB1-218ENST00000528877 PUS3Q9BZE2 481 aaKnown RBP8.83□□□□□ -1
ITGB1-218ENST00000528877 GBA2Q9HCG7 927 aaPredicted RBP8.83□□□□□ -1
ITGB1-218ENST00000528877 PRDM10Q9NQV6 1147 aa8.83□□□□□ -1
ITGB1-218ENST00000528877 HDAC9Q9UKV0 1011 aa8.83□□□□□ -1
ITGB1-218ENST00000528877 HDAC5Q9UQL6 1122 aa8.83□□□□□ -1
ITGB1-218ENST00000528877 FOXN1O15353 648 aa8.82□□□□□ -1
ITGB1-218ENST00000528877 CA12O43570 354 aa8.82□□□□□ -1
ITGB1-218ENST00000528877 CIAO1O76071 339 aa8.82□□□□□ -1
ITGB1-218ENST00000528877 PDE8BO95263 885 aa8.82□□□□□ -1
ITGB1-218ENST00000528877 TRIM27P14373 513 aa8.82□□□□□ -1
ITGB1-218ENST00000528877 FGFR2P21802 821 aa8.82□□□□□ -1
ITGB1-218ENST00000528877 CTCFP49711 727 aaPredicted RBP8.82□□□□□ -1
ITGB1-218ENST00000528877 PTPN12Q05209 780 aaKnown RBP8.82□□□□□ -1
ITGB1-218ENST00000528877 NOGQ13253 232 aa8.82□□□□□ -1
ITGB1-218ENST00000528877 PUM3Q15397 648 aaKnown RBP8.82□□□□□ -1
ITGB1-218ENST00000528877 NBPF9Q3BBW0 867 aa8.82□□□□□ -1
ITGB1-218ENST00000528877 TMEM259Q4ZIN3 620 aa8.82□□□□□ -1
ITGB1-218ENST00000528877 COL13A1Q5TAT6 717 aaPredicted RBP8.82□□□□□ -1
ITGB1-218ENST00000528877 FBXO33Q7Z6M2 555 aa8.82□□□□□ -1
ITGB1-218ENST00000528877 APOBEC3FQ8IUX4 373 aaKnown RBP8.82□□□□□ -1
ITGB1-218ENST00000528877 FAM174AQ8TBP5 190 aa8.82□□□□□ -1
ITGB1-218ENST00000528877 AIDAQ96BJ3 306 aa8.82□□□□□ -1
ITGB1-218ENST00000528877 FAM84BQ96KN1 310 aaPredicted RBP8.82□□□□□ -1
ITGB1-218ENST00000528877 SSC5DA1L4H1 1573 aa8.82□□□□□ -1
ITGB1-218ENST00000528877 FAM155AB1AL88 458 aaPredicted RBP8.81□□□□□ -1
ITGB1-218ENST00000528877 EYA2O00167 538 aa8.81□□□□□ -1
ITGB1-218ENST00000528877 AP1G2O75843 785 aa8.81□□□□□ -1
ITGB1-218ENST00000528877 GNAI3P08754 354 aa8.81□□□□□ -1
ITGB1-218ENST00000528877 HIBADHP31937 336 aaKnown RBP8.81□□□□□ -1
ITGB1-218ENST00000528877 SMCPP49901 116 aaPredicted RBP8.81□□□□□ -1
ITGB1-218ENST00000528877 HUNKP57058 714 aa8.81□□□□□ -1
ITGB1-218ENST00000528877 CTDSPL2Q05D32 466 aa8.81□□□□□ -1
ITGB1-218ENST00000528877 LRRC24Q50LG9 513 aa8.81□□□□□ -1
ITGB1-218ENST00000528877 METTL24Q5JXM2 366 aa8.81□□□□□ -1
ITGB1-218ENST00000528877 DLK2Q6UY11 383 aa8.81□□□□□ -1
ITGB1-218ENST00000528877 ATF7IPQ6VMQ6 1270 aa8.81□□□□□ -1
ITGB1-218ENST00000528877 ATG9AQ7Z3C6 839 aa8.81□□□□□ -1
ITGB1-218ENST00000528877 KIAA0825Q8IV33 1275 aa8.81□□□□□ -1
ITGB1-218ENST00000528877 C2orf69Q8N8R5 385 aa8.81□□□□□ -1
ITGB1-218ENST00000528877 MEIS3Q99687 375 aa8.81□□□□□ -1
ITGB1-218ENST00000528877 ZNF408Q9H9D4 720 aa8.81□□□□□ -1
ITGB1-218ENST00000528877 SERPINA10Q9UK55 444 aa8.81□□□□□ -1
ITGB1-218ENST00000528877 PPP2R3BQ9Y5P8 575 aa8.81□□□□□ -1
ITGB1-218ENST00000528877 POLR2AP24928 1970 aaKnown RBP8.81□□□□□ -1
ITGB1-218ENST00000528877 IPO8O15397 1037 aaKnown RBP8.8□□□□□ -1
ITGB1-218ENST00000528877 SIAH2O43255 324 aa8.8□□□□□ -1
ITGB1-218ENST00000528877 HSPA8P11142 646 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms