RNA–Protein interactions for RNA: ENST00000524509.1

PACSIN3-202, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 554 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-202ENST00000524509 MYH2Q9UKX2 1941 aa21.08■□□□□ 0.97
PACSIN3-202ENST00000524509 POTEFA5A3E0 1075 aa21.08■□□□□ 0.97
PACSIN3-202ENST00000524509 MBD4O95243 580 aa21.08■□□□□ 0.97
PACSIN3-202ENST00000524509 HLA-DOAP06340 250 aa21.08■□□□□ 0.97
PACSIN3-202ENST00000524509 ZBTB48P10074 688 aaPredicted RBP21.08■□□□□ 0.97
PACSIN3-202ENST00000524509 DYNLL1P63167 89 aaKnown RBP21.08■□□□□ 0.97
PACSIN3-202ENST00000524509 NFIAQ12857 509 aa21.08■□□□□ 0.97
PACSIN3-202ENST00000524509 MAP3K11Q16584 847 aa21.08■□□□□ 0.97
PACSIN3-202ENST00000524509 GIMAP6Q6P9H5 292 aa21.08■□□□□ 0.97
PACSIN3-202ENST00000524509 RUFY2Q8WXA3 655 aa21.08■□□□□ 0.97
PACSIN3-202ENST00000524509 SLC10A4Q96EP9 437 aa21.08■□□□□ 0.97
PACSIN3-202ENST00000524509 TMEM39BQ9GZU3 492 aa21.08■□□□□ 0.97
PACSIN3-202ENST00000524509 OSBPL5Q9H0X9 879 aaPredicted RBP21.08■□□□□ 0.97
PACSIN3-202ENST00000524509 DOCK2Q92608 1830 aa21.08■□□□□ 0.96
PACSIN3-202ENST00000524509 COL2A1P02458 1487 aaPredicted RBP21.07■□□□□ 0.96
PACSIN3-202ENST00000524509 SDSP20132 328 aa21.07■□□□□ 0.96
PACSIN3-202ENST00000524509 IREB2P48200 963 aaKnown RBP21.07■□□□□ 0.96
PACSIN3-202ENST00000524509 BMP2KLQ5H9B9 411 aa21.07■□□□□ 0.96
PACSIN3-202ENST00000524509 TTC6Q86TZ1 520 aa21.07■□□□□ 0.96
PACSIN3-202ENST00000524509 NACAP1Q9BZK3 213 aa21.07■□□□□ 0.96
PACSIN3-202ENST00000524509 PUS7LQ9H0K6 701 aaKnown RBP21.07■□□□□ 0.96
PACSIN3-202ENST00000524509 MCMDC2Q4G0Z9 681 aa21.06■□□□□ 0.96
PACSIN3-202ENST00000524509 OSBP2Q969R2 916 aa21.06■□□□□ 0.96
PACSIN3-202ENST00000524509 TEPSINQ96N21 525 aa21.06■□□□□ 0.96
PACSIN3-202ENST00000524509 PI4KBQ9UBF8 816 aa21.06■□□□□ 0.96
PACSIN3-202ENST00000524509 ATRNL1Q5VV63 1379 aa21.06■□□□□ 0.96
PACSIN3-202ENST00000524509 ECM29Q5VYK3 1845 aa21.06■□□□□ 0.96
PACSIN3-202ENST00000524509 FLT1P17948 1338 aa21.05■□□□□ 0.96
PACSIN3-202ENST00000524509 GPAA1O43292 621 aa21.05■□□□□ 0.96
PACSIN3-202ENST00000524509 GSPT1P15170 499 aaKnown RBP21.05■□□□□ 0.96
PACSIN3-202ENST00000524509 NBPF12Q5TAG4 269 aaPredicted RBP21.05■□□□□ 0.96
PACSIN3-202ENST00000524509 CASC1Q6TDU7 716 aa21.05■□□□□ 0.96
PACSIN3-202ENST00000524509 FOXP4Q8IVH2 680 aaPredicted RBP21.05■□□□□ 0.96
PACSIN3-202ENST00000524509 LCORLQ8N3X6 602 aa21.05■□□□□ 0.96
PACSIN3-202ENST00000524509 ERO1AQ96HE7 468 aa21.05■□□□□ 0.96
PACSIN3-202ENST00000524509 STRBPQ96SI9 672 aaKnown RBP21.05■□□□□ 0.96
PACSIN3-202ENST00000524509 TRIM34Q9BYJ4 488 aa21.05■□□□□ 0.96
PACSIN3-202ENST00000524509 ARMT1Q9H993 441 aa21.05■□□□□ 0.96
PACSIN3-202ENST00000524509 HERC5Q9UII4 1024 aaKnown RBP21.05■□□□□ 0.96
PACSIN3-202ENST00000524509 PTPN22Q9Y2R2 807 aa21.05■□□□□ 0.96
PACSIN3-202ENST00000524509 SLC4A4Q9Y6R1 1079 aa21.05■□□□□ 0.96
PACSIN3-202ENST00000524509 KIAA0100Q14667 2235 aaKnown RBP21.05■□□□□ 0.96
PACSIN3-202ENST00000524509 BRCA2P51587 3418 aa21.04■□□□□ 0.96
PACSIN3-202ENST00000524509 IGF2BP3O00425 579 aaKnown RBP eCLIP21.04■□□□□ 0.96
PACSIN3-202ENST00000524509 TBC1D12O60347 775 aa21.04■□□□□ 0.96
PACSIN3-202ENST00000524509 MAPKAPK5Q8IW41 473 aa21.04■□□□□ 0.96
PACSIN3-202ENST00000524509 WNK4Q96J92 1243 aa21.04■□□□□ 0.96
PACSIN3-202ENST00000524509 DDX4Q9NQI0 724 aaKnown RBP21.04■□□□□ 0.96
PACSIN3-202ENST00000524509 FZD1Q9UP38 647 aa21.04■□□□□ 0.96
PACSIN3-202ENST00000524509 PATL2C9JE40 543 aaKnown RBP21.03■□□□□ 0.96
PACSIN3-202ENST00000524509 ARMC5Q96C12 935 aa21.03■□□□□ 0.96
PACSIN3-202ENST00000524509 ZNF341Q9BYN7 854 aa21.03■□□□□ 0.96
PACSIN3-202ENST00000524509 SSC5DA1L4H1 1573 aa21.02■□□□□ 0.96
PACSIN3-202ENST00000524509 POLR3DP05423 398 aaPredicted RBP21.02■□□□□ 0.96
PACSIN3-202ENST00000524509 OTUD7BQ6GQQ9 843 aa21.02■□□□□ 0.96
PACSIN3-202ENST00000524509 CLMNQ96JQ2 1002 aa21.02■□□□□ 0.96
PACSIN3-202ENST00000524509 DCP1AQ9NPI6 582 aaPredicted RBP21.02■□□□□ 0.96
PACSIN3-202ENST00000524509 MCM9Q9NXL9 1143 aa21.02■□□□□ 0.96
PACSIN3-202ENST00000524509 RAD50Q92878 1312 aa21.02■□□□□ 0.95
PACSIN3-202ENST00000524509 APPP05067 770 aa21.01■□□□□ 0.95
PACSIN3-202ENST00000524509 MAP3K10Q02779 954 aa21.01■□□□□ 0.95
PACSIN3-202ENST00000524509 ANKRD13AQ8IZ07 590 aa21.01■□□□□ 0.95
PACSIN3-202ENST00000524509 CRACR2BQ8N4Y2 399 aaPredicted RBP21.01■□□□□ 0.95
PACSIN3-202ENST00000524509 EHD4Q9H223 541 aa21.01■□□□□ 0.95
PACSIN3-202ENST00000524509 ARPP21Q9UBL0 812 aaPredicted RBP21.01■□□□□ 0.95
PACSIN3-202ENST00000524509 FXR1P51114 621 aaKnown RBP eCLIP21■□□□□ 0.95
PACSIN3-202ENST00000524509 NMIQ13287 307 aaPredicted RBP21■□□□□ 0.95
PACSIN3-202ENST00000524509 CRHR2Q13324 411 aa21■□□□□ 0.95
PACSIN3-202ENST00000524509 ZFPM1Q8IX07 1006 aa21■□□□□ 0.95
PACSIN3-202ENST00000524509 CD99L2Q8TCZ2 262 aa21■□□□□ 0.95
PACSIN3-202ENST00000524509 EFCC1Q9HA90 598 aa21■□□□□ 0.95
PACSIN3-202ENST00000524509 CSADQ9Y600 493 aa21■□□□□ 0.95
PACSIN3-202ENST00000524509 DDTLA6NHG4 134 aaPredicted RBP20.99■□□□□ 0.95
PACSIN3-202ENST00000524509 M0R2C6 588 aa20.99■□□□□ 0.95
PACSIN3-202ENST00000524509 EN2P19622 333 aaPredicted RBP20.99■□□□□ 0.95
PACSIN3-202ENST00000524509 MAP3K9P80192 1104 aa20.99■□□□□ 0.95
PACSIN3-202ENST00000524509 SLFNL1Q499Z3 407 aa20.99■□□□□ 0.95
PACSIN3-202ENST00000524509 CWC27Q6UX04 472 aaKnown RBP20.99■□□□□ 0.95
PACSIN3-202ENST00000524509 SDR42E1Q8WUS8 393 aa20.99■□□□□ 0.95
PACSIN3-202ENST00000524509 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.99■□□□□ 0.95
PACSIN3-202ENST00000524509 ZNF287Q9HBT7 754 aa20.99■□□□□ 0.95
PACSIN3-202ENST00000524509 GINM1Q9NU53 330 aa20.99■□□□□ 0.95
PACSIN3-202ENST00000524509 PALD1Q9ULE6 856 aa20.99■□□□□ 0.95
PACSIN3-202ENST00000524509 CCDC171Q6TFL3 1326 aa20.99■□□□□ 0.95
PACSIN3-202ENST00000524509 USP2O75604 605 aaPredicted RBP20.98■□□□□ 0.95
PACSIN3-202ENST00000524509 SLC3A2P08195 630 aaKnown RBP20.98■□□□□ 0.95
PACSIN3-202ENST00000524509 TDO2P48775 406 aa20.98■□□□□ 0.95
PACSIN3-202ENST00000524509 SP3Q02447 781 aa20.98■□□□□ 0.95
PACSIN3-202ENST00000524509 METTL16Q86W50 562 aaKnown RBP20.98■□□□□ 0.95
PACSIN3-202ENST00000524509 FAM227BQ96M60 508 aa20.98■□□□□ 0.95
PACSIN3-202ENST00000524509 NAPBQ9H115 298 aa20.98■□□□□ 0.95
PACSIN3-202ENST00000524509 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.98■□□□□ 0.95
PACSIN3-202ENST00000524509 SERPINB13Q9UIV8 391 aa20.98■□□□□ 0.95
PACSIN3-202ENST00000524509 A0A0D9SFI3 127 aa20.97■□□□□ 0.95
PACSIN3-202ENST00000524509 TESPA1A2RU30 521 aaPredicted RBP20.97■□□□□ 0.95
PACSIN3-202ENST00000524509 GSG1L2A8MUP6 293 aa20.97■□□□□ 0.95
PACSIN3-202ENST00000524509 EIF5BO60841 1220 aaKnown RBP20.97■□□□□ 0.95
PACSIN3-202ENST00000524509 CHGBP05060 677 aa20.97■□□□□ 0.95
PACSIN3-202ENST00000524509 CHMLP26374 656 aa20.97■□□□□ 0.95
PACSIN3-202ENST00000524509 SBK1Q52WX2 424 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 194.2 ms