RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 SPTLC3Q9NUV7 552 aa15.96■□□□□ 0.15
LDLRAD3-202ENST00000524419 CCDC196A0A1B0GTZ2 297 aa15.95■□□□□ 0.14
LDLRAD3-202ENST00000524419 ONECUT3O60422 494 aaPredicted RBP15.95■□□□□ 0.14
LDLRAD3-202ENST00000524419 PCP11498 1178 aaKnown RBP15.95■□□□□ 0.14
LDLRAD3-202ENST00000524419 MECOMQ03112 1051 aa15.95■□□□□ 0.14
LDLRAD3-202ENST00000524419 SEPT12Q8IYM1 358 aa15.95■□□□□ 0.14
LDLRAD3-202ENST00000524419 TRIM22Q8IYM9 498 aa15.95■□□□□ 0.14
LDLRAD3-202ENST00000524419 BCL11BQ9C0K0 894 aaPredicted RBP15.95■□□□□ 0.14
LDLRAD3-202ENST00000524419 DYNC1I1O14576 645 aa15.95■□□□□ 0.14
LDLRAD3-202ENST00000524419 ZBTB22O15209 634 aa15.95■□□□□ 0.14
LDLRAD3-202ENST00000524419 GRAPQ13588 217 aa15.95■□□□□ 0.14
LDLRAD3-202ENST00000524419 NFIXQ14938 502 aa15.95■□□□□ 0.14
LDLRAD3-202ENST00000524419 STX1AQ16623 288 aa15.95■□□□□ 0.14
LDLRAD3-202ENST00000524419 ZNF654Q8IZM8 581 aa15.95■□□□□ 0.14
LDLRAD3-202ENST00000524419 GRAPLQ8TC17 118 aaPredicted RBP15.95■□□□□ 0.14
LDLRAD3-202ENST00000524419 ZNF384Q8TF68 577 aa15.95■□□□□ 0.14
LDLRAD3-202ENST00000524419 CRNKL1Q9BZJ0 848 aaKnown RBP15.95■□□□□ 0.14
LDLRAD3-202ENST00000524419 TNKSO95271 1327 aa15.94■□□□□ 0.14
LDLRAD3-202ENST00000524419 SPTY2D1Q68D10 685 aaPredicted RBP15.94■□□□□ 0.14
LDLRAD3-202ENST00000524419 LUZP1Q86V48 1076 aa15.94■□□□□ 0.14
LDLRAD3-202ENST00000524419 FMR1NBQ8N0W7 255 aaPredicted RBP15.94■□□□□ 0.14
LDLRAD3-202ENST00000524419 DNAJC25Q9H1X3 360 aa15.94■□□□□ 0.14
LDLRAD3-202ENST00000524419 MPNDQ8N594 471 aa15.93■□□□□ 0.14
LDLRAD3-202ENST00000524419 ANKIB1Q9P2G1 1089 aa15.93■□□□□ 0.14
LDLRAD3-202ENST00000524419 TAOK2Q9UL54 1235 aa15.93■□□□□ 0.14
LDLRAD3-202ENST00000524419 IRS2Q9Y4H2 1338 aa15.93■□□□□ 0.14
LDLRAD3-202ENST00000524419 U2AF2P26368 475 aaKnown RBP eCLIP15.93■□□□□ 0.14
LDLRAD3-202ENST00000524419 ZNF165P49910 485 aa15.93■□□□□ 0.14
LDLRAD3-202ENST00000524419 SEC23AQ15436 765 aa15.93■□□□□ 0.14
LDLRAD3-202ENST00000524419 CCDC125Q86Z20 511 aa15.93■□□□□ 0.14
LDLRAD3-202ENST00000524419 JMYQ8N9B5 988 aa15.93■□□□□ 0.14
LDLRAD3-202ENST00000524419 TDRD7Q8NHU6 1098 aaKnown RBP15.93■□□□□ 0.14
LDLRAD3-202ENST00000524419 NUP133Q8WUM0 1156 aa15.93■□□□□ 0.14
LDLRAD3-202ENST00000524419 PRIMPOLQ96LW4 560 aa15.93■□□□□ 0.14
LDLRAD3-202ENST00000524419 PDCL3Q9H2J4 239 aa15.93■□□□□ 0.14
LDLRAD3-202ENST00000524419 LEMD3Q9Y2U8 911 aa15.93■□□□□ 0.14
LDLRAD3-202ENST00000524419 CYP2D7A0A087X1C5 515 aa15.92■□□□□ 0.14
LDLRAD3-202ENST00000524419 A0A1B0GVL5 298 aa15.92■□□□□ 0.14
LDLRAD3-202ENST00000524419 SLC39A14Q15043 492 aa15.92■□□□□ 0.14
LDLRAD3-202ENST00000524419 PPP2R5BQ15173 497 aa15.92■□□□□ 0.14
LDLRAD3-202ENST00000524419 SAFBQ15424 915 aaKnown RBP eCLIP15.92■□□□□ 0.14
LDLRAD3-202ENST00000524419 CTR9Q6PD62 1173 aa15.92■□□□□ 0.14
LDLRAD3-202ENST00000524419 DZIP1Q86YF9 867 aaKnown RBP15.92■□□□□ 0.14
LDLRAD3-202ENST00000524419 FANCBQ8NB91 859 aa15.92■□□□□ 0.14
LDLRAD3-202ENST00000524419 ZSCAN10Q96SZ4 725 aaPredicted RBP15.92■□□□□ 0.14
LDLRAD3-202ENST00000524419 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.92■□□□□ 0.14
LDLRAD3-202ENST00000524419 AATFQ9NY61 560 aaKnown RBP eCLIP15.92■□□□□ 0.14
LDLRAD3-202ENST00000524419 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.91■□□□□ 0.14
LDLRAD3-202ENST00000524419 DEXIO95424 95 aa15.91■□□□□ 0.14
LDLRAD3-202ENST00000524419 PRDX5P30044 214 aa15.91■□□□□ 0.14
LDLRAD3-202ENST00000524419 NDUFA8P51970 172 aa15.91■□□□□ 0.14
LDLRAD3-202ENST00000524419 DNTTIP2Q5QJE6 756 aaKnown RBP15.91■□□□□ 0.14
LDLRAD3-202ENST00000524419 MAP7D2Q96T17 732 aa15.91■□□□□ 0.14
LDLRAD3-202ENST00000524419 LRRC4BQ9NT99 713 aa15.91■□□□□ 0.14
LDLRAD3-202ENST00000524419 ATP8A2Q9NTI2 1148 aa15.91■□□□□ 0.14
LDLRAD3-202ENST00000524419 XDHP47989 1333 aa15.91■□□□□ 0.14
LDLRAD3-202ENST00000524419 IGSF3O75054 1194 aa15.91■□□□□ 0.14
LDLRAD3-202ENST00000524419 SLC3A2P08195 630 aaKnown RBP15.91■□□□□ 0.14
LDLRAD3-202ENST00000524419 CMA1P23946 247 aa15.91■□□□□ 0.14
LDLRAD3-202ENST00000524419 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.91■□□□□ 0.14
LDLRAD3-202ENST00000524419 NBPF11Q86T75 865 aa15.91■□□□□ 0.14
LDLRAD3-202ENST00000524419 TXNRD3Q86VQ6 643 aa15.91■□□□□ 0.14
LDLRAD3-202ENST00000524419 IQCA1Q86XH1 822 aa15.91■□□□□ 0.14
LDLRAD3-202ENST00000524419 CRACR2BQ8N4Y2 399 aaPredicted RBP15.91■□□□□ 0.14
LDLRAD3-202ENST00000524419 ENAHQ8N8S7 591 aaPredicted RBP15.91■□□□□ 0.14
LDLRAD3-202ENST00000524419 RPGRQ92834 1020 aaKnown RBP15.91■□□□□ 0.14
LDLRAD3-202ENST00000524419 ANO10Q9NW15 660 aa15.91■□□□□ 0.14
LDLRAD3-202ENST00000524419 USP17L12C9JPN9 530 aa15.9■□□□□ 0.14
LDLRAD3-202ENST00000524419 USP17L21D6R901 530 aa15.9■□□□□ 0.14
LDLRAD3-202ENST00000524419 PPP6R2O75170 966 aa15.9■□□□□ 0.14
LDLRAD3-202ENST00000524419 MMP1P03956 469 aa15.9■□□□□ 0.14
LDLRAD3-202ENST00000524419 FGRP09769 529 aa15.9■□□□□ 0.14
LDLRAD3-202ENST00000524419 ST5P78524 1137 aa15.9■□□□□ 0.14
LDLRAD3-202ENST00000524419 IFIT1BQ5T764 474 aaKnown RBP15.9■□□□□ 0.14
LDLRAD3-202ENST00000524419 PRR5LQ6MZQ0 368 aa15.9■□□□□ 0.14
LDLRAD3-202ENST00000524419 ZNF804AQ7Z570 1209 aa15.9■□□□□ 0.14
LDLRAD3-202ENST00000524419 CATIPQ7Z7H3 387 aa15.9■□□□□ 0.14
LDLRAD3-202ENST00000524419 WDR66Q8TBY9 1149 aa15.9■□□□□ 0.14
LDLRAD3-202ENST00000524419 KIAA1524Q8TCG1 905 aa15.9■□□□□ 0.14
LDLRAD3-202ENST00000524419 SDF4Q9BRK5 362 aa15.9■□□□□ 0.14
LDLRAD3-202ENST00000524419 KCNF1Q9H3M0 494 aa15.9■□□□□ 0.14
LDLRAD3-202ENST00000524419 DCP1AQ9NPI6 582 aaPredicted RBP15.9■□□□□ 0.14
LDLRAD3-202ENST00000524419 ARPP21Q9UBL0 812 aaPredicted RBP15.9■□□□□ 0.14
LDLRAD3-202ENST00000524419 NAV1Q8NEY1 1877 aa15.9■□□□□ 0.14
LDLRAD3-202ENST00000524419 UBE2Q2LH0YL09 131 aa15.89■□□□□ 0.13
LDLRAD3-202ENST00000524419 SMIM22K7EJ46 135 aa15.89■□□□□ 0.13
LDLRAD3-202ENST00000524419 ORC4O43929 436 aa15.89■□□□□ 0.13
LDLRAD3-202ENST00000524419 GUCY1A2P33402 732 aa15.89■□□□□ 0.13
LDLRAD3-202ENST00000524419 AXDND1Q5T1B0 1012 aaPredicted RBP15.89■□□□□ 0.13
LDLRAD3-202ENST00000524419 NOSTRINQ8IVI9 506 aa15.89■□□□□ 0.13
LDLRAD3-202ENST00000524419 MYRIPQ8NFW9 859 aa15.89■□□□□ 0.13
LDLRAD3-202ENST00000524419 UBE2Q2Q8WVN8 375 aa15.89■□□□□ 0.13
LDLRAD3-202ENST00000524419 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.89■□□□□ 0.13
LDLRAD3-202ENST00000524419 BRWD3Q6RI45 1802 aa15.89■□□□□ 0.13
LDLRAD3-202ENST00000524419 GOLGA6L19H0YKK7 550 aa15.89■□□□□ 0.13
LDLRAD3-202ENST00000524419 CALM1P0DP23 149 aa15.89■□□□□ 0.13
LDLRAD3-202ENST00000524419 CALM2P0DP24 149 aa15.89■□□□□ 0.13
LDLRAD3-202ENST00000524419 CALM3P0DP25 149 aa15.89■□□□□ 0.13
LDLRAD3-202ENST00000524419 PFKFB1P16118 471 aa15.89■□□□□ 0.13
LDLRAD3-202ENST00000524419 MARCKSP29966 332 aaPredicted RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms