RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 LTBP1Q14766 1721 aa30.08■■■□□ 2.41
COL13A1-214ENST00000522165 CCDC196A0A1B0GTZ2 297 aa30.08■■■□□ 2.41
COL13A1-214ENST00000522165 SP8Q8IXZ3 490 aa30.08■■■□□ 2.41
COL13A1-214ENST00000522165 FANCBQ8NB91 859 aa30.08■■■□□ 2.41
COL13A1-214ENST00000522165 FLAD1Q8NFF5 587 aa30.08■■■□□ 2.41
COL13A1-214ENST00000522165 CLSTN2Q9H4D0 955 aa30.08■■■□□ 2.41
COL13A1-214ENST00000522165 PPEF1O14829 653 aaPredicted RBP30.07■■■□□ 2.4
COL13A1-214ENST00000522165 MAP3K11Q16584 847 aa30.07■■■□□ 2.4
COL13A1-214ENST00000522165 MKRN1Q9UHC7 482 aaKnown RBP30.07■■■□□ 2.4
COL13A1-214ENST00000522165 SLC3A2P08195 630 aaKnown RBP30.07■■■□□ 2.4
COL13A1-214ENST00000522165 CYP2D6P10635 497 aa30.07■■■□□ 2.4
COL13A1-214ENST00000522165 PPP4CP60510 307 aa30.07■■■□□ 2.4
COL13A1-214ENST00000522165 DIXDC1Q155Q3 683 aa30.07■■■□□ 2.4
COL13A1-214ENST00000522165 IQCA1Q86XH1 822 aa30.07■■■□□ 2.4
COL13A1-214ENST00000522165 FAM43AQ8N2R8 423 aa30.07■■■□□ 2.4
COL13A1-214ENST00000522165 PDLIM2Q96JY6 352 aa30.07■■■□□ 2.4
COL13A1-214ENST00000522165 POLR3EQ9NVU0 708 aa30.07■■■□□ 2.4
COL13A1-214ENST00000522165 LDHCP07864 332 aa30.06■■■□□ 2.4
COL13A1-214ENST00000522165 CAMK4Q16566 473 aa30.06■■■□□ 2.4
COL13A1-214ENST00000522165 NUP133Q8WUM0 1156 aa30.06■■■□□ 2.4
COL13A1-214ENST00000522165 WASF1Q92558 559 aa30.06■■■□□ 2.4
COL13A1-214ENST00000522165 TNMDQ9H2S6 317 aa30.06■■■□□ 2.4
COL13A1-214ENST00000522165 RXRBP28702 533 aa30.05■■■□□ 2.4
COL13A1-214ENST00000522165 NBPF11Q86T75 865 aa30.05■■■□□ 2.4
COL13A1-214ENST00000522165 CLIC4Q9Y696 253 aa30.05■■■□□ 2.4
COL13A1-214ENST00000522165 UBE2Q2LH0YL09 131 aa30.05■■■□□ 2.4
COL13A1-214ENST00000522165 BAG3O95817 575 aa30.05■■■□□ 2.4
COL13A1-214ENST00000522165 PPP2R5BQ15173 497 aa30.05■■■□□ 2.4
COL13A1-214ENST00000522165 UVSSAQ2YD98 709 aa30.05■■■□□ 2.4
COL13A1-214ENST00000522165 RBM43Q6ZSC3 357 aaKnown RBP30.05■■■□□ 2.4
COL13A1-214ENST00000522165 TRIM22Q8IYM9 498 aa30.05■■■□□ 2.4
COL13A1-214ENST00000522165 LINC00301Q8NCQ3 95 aa30.05■■■□□ 2.4
COL13A1-214ENST00000522165 SH3RF3Q8TEJ3 882 aaPredicted RBP30.05■■■□□ 2.4
COL13A1-214ENST00000522165 MCM9Q9NXL9 1143 aa30.05■■■□□ 2.4
COL13A1-214ENST00000522165 DLEC1Q9Y238 1755 aa30.04■■■□□ 2.4
COL13A1-214ENST00000522165 YEATS4O95619 227 aa30.04■■■□□ 2.4
COL13A1-214ENST00000522165 SRGNP10124 158 aa30.04■■■□□ 2.4
COL13A1-214ENST00000522165 ME1P48163 572 aa30.04■■■□□ 2.4
COL13A1-214ENST00000522165 TRIM29Q14134 588 aa30.04■■■□□ 2.4
COL13A1-214ENST00000522165 IFIT1BQ5T764 474 aaKnown RBP30.04■■■□□ 2.4
COL13A1-214ENST00000522165 CCAR1Q8IX12 1150 aaKnown RBP30.04■■■□□ 2.4
COL13A1-214ENST00000522165 CRACR2BQ8N4Y2 399 aaPredicted RBP30.04■■■□□ 2.4
COL13A1-214ENST00000522165 TRIM44Q96DX7 344 aaPredicted RBP30.04■■■□□ 2.4
COL13A1-214ENST00000522165 ATP6V0A2Q9Y487 856 aa30.04■■■□□ 2.4
COL13A1-214ENST00000522165 MROH7-TTC4A0A0A0MT08 1334 aa30.04■■■□□ 2.4
COL13A1-214ENST00000522165 C6orf229H3BNL8 230 aa30.03■■■□□ 2.4
COL13A1-214ENST00000522165 USP17L8P0C7I0 530 aa30.03■■■□□ 2.4
COL13A1-214ENST00000522165 CCDC192P0DO97 292 aa30.03■■■□□ 2.4
COL13A1-214ENST00000522165 USP5P45974 858 aa30.03■■■□□ 2.4
COL13A1-214ENST00000522165 NOL10Q9BSC4 688 aaKnown RBP30.03■■■□□ 2.4
COL13A1-214ENST00000522165 RTN4Q9NQC3 1192 aaKnown RBP30.03■■■□□ 2.4
COL13A1-214ENST00000522165 GUCY1A2P33402 732 aa30.02■■■□□ 2.4
COL13A1-214ENST00000522165 PDE4BQ07343 736 aa30.02■■■□□ 2.4
COL13A1-214ENST00000522165 RTFDC1Q9BY42 306 aaPredicted RBP30.02■■■□□ 2.4
COL13A1-214ENST00000522165 PCDHA7Q9UN72 937 aa30.02■■■□□ 2.4
COL13A1-214ENST00000522165 NPR1P16066 1061 aa30.02■■■□□ 2.4
COL13A1-214ENST00000522165 KCNG4Q8TDN1 519 aa30.02■■■□□ 2.4
COL13A1-214ENST00000522165 GOLPH3LQ9H4A5 285 aa30.02■■■□□ 2.4
COL13A1-214ENST00000522165 MMP10P09238 476 aa30.01■■■□□ 2.39
COL13A1-214ENST00000522165 U2AF2P26368 475 aaKnown RBP eCLIP30.01■■■□□ 2.39
COL13A1-214ENST00000522165 STK38Q15208 465 aa30.01■■■□□ 2.39
COL13A1-214ENST00000522165 C12orf60Q5U649 245 aa30.01■■■□□ 2.39
COL13A1-214ENST00000522165 CATIPQ7Z7H3 387 aa30.01■■■□□ 2.39
COL13A1-214ENST00000522165 DEXIO95424 95 aa30■■■□□ 2.39
COL13A1-214ENST00000522165 ANO1Q5XXA6 986 aa30■■■□□ 2.39
COL13A1-214ENST00000522165 ADALQ6DHV7 355 aa30■■■□□ 2.39
COL13A1-214ENST00000522165 CERS3Q8IU89 383 aa30■■■□□ 2.39
COL13A1-214ENST00000522165 CMTR1Q8N1G2 835 aaKnown RBP30■■■□□ 2.39
COL13A1-214ENST00000522165 PARP3Q9Y6F1 533 aa30■■■□□ 2.39
COL13A1-214ENST00000522165 MFSD14BQ5SR56 506 aa29.99■■■□□ 2.39
COL13A1-214ENST00000522165 CCDC73Q6ZRK6 1079 aa29.99■■■□□ 2.39
COL13A1-214ENST00000522165 CKAP2LQ8IYA6 745 aa29.99■■■□□ 2.39
COL13A1-214ENST00000522165 TBC1D22AQ8WUA7 517 aa29.99■■■□□ 2.39
COL13A1-214ENST00000522165 TAOK2Q9UL54 1235 aa29.99■■■□□ 2.39
COL13A1-214ENST00000522165 PDE6BP35913 854 aa29.99■■■□□ 2.39
COL13A1-214ENST00000522165 TROAPQ12815 778 aa29.99■■■□□ 2.39
COL13A1-214ENST00000522165 GNL2Q13823 731 aaKnown RBP29.99■■■□□ 2.39
COL13A1-214ENST00000522165 FAM47AQ5JRC9 791 aa29.99■■■□□ 2.39
COL13A1-214ENST00000522165 CCDC82Q8N4S0 544 aa29.99■■■□□ 2.39
COL13A1-214ENST00000522165 ENGASEQ8NFI3 743 aa29.99■■■□□ 2.39
COL13A1-214ENST00000522165 TNS1Q9HBL0 1735 aaKnown RBP29.98■■■□□ 2.39
COL13A1-214ENST00000522165 FAM205AQ6ZU69 1335 aa29.98■■■□□ 2.39
COL13A1-214ENST00000522165 A0A1W2PQ27 194 aa29.98■■■□□ 2.39
COL13A1-214ENST00000522165 A0A1W2PQ64 194 aa29.98■■■□□ 2.39
COL13A1-214ENST00000522165 A0A1W2PQD8 194 aa29.98■■■□□ 2.39
COL13A1-214ENST00000522165 SPTLC2O15270 562 aa29.98■■■□□ 2.39
COL13A1-214ENST00000522165 CALM1P0DP23 149 aa29.98■■■□□ 2.39
COL13A1-214ENST00000522165 CALM2P0DP24 149 aa29.98■■■□□ 2.39
COL13A1-214ENST00000522165 CALM3P0DP25 149 aa29.98■■■□□ 2.39
COL13A1-214ENST00000522165 SNW1Q13573 536 aaKnown RBP29.98■■■□□ 2.39
COL13A1-214ENST00000522165 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.98■■■□□ 2.39
COL13A1-214ENST00000522165 ROBO3Q96MS0 1386 aa29.98■■■□□ 2.39
COL13A1-214ENST00000522165 GPR75-ASB3A0A0A6YYF3 556 aa29.97■■■□□ 2.39
COL13A1-214ENST00000522165 DDAH1O94760 285 aa29.97■■■□□ 2.39
COL13A1-214ENST00000522165 FAM160A1Q05DH4 1040 aa29.97■■■□□ 2.39
COL13A1-214ENST00000522165 TYRO3Q06418 890 aa29.97■■■□□ 2.39
COL13A1-214ENST00000522165 SF3A1Q15459 793 aaKnown RBP29.97■■■□□ 2.39
COL13A1-214ENST00000522165 FSIP1Q8NA03 581 aa29.97■■■□□ 2.39
COL13A1-214ENST00000522165 ALDH1B1P30837 517 aa29.97■■■□□ 2.39
COL13A1-214ENST00000522165 BTDP43251 543 aa29.97■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms