RNA–Protein interactions for RNA: ENST00000522115.6

PTPN12-215, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 5

Gene PTPN12, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-215	ENST00000522115	CILP	O75339	1184 aa		7.34	□□□□□ -1.23
PTPN12-215	ENST00000522115	PF4	P02776	101 aa		7.34	□□□□□ -1.23
PTPN12-215	ENST00000522115	FOSL1	P15407	271 aa		7.34	□□□□□ -1.23
PTPN12-215	ENST00000522115	GBP2	P32456	591 aa	Predicted RBP	7.34	□□□□□ -1.23
PTPN12-215	ENST00000522115	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	7.34	□□□□□ -1.23
PTPN12-215	ENST00000522115	SHISA5	Q8N114	240 aa		7.34	□□□□□ -1.23
PTPN12-215	ENST00000522115	GATAD2B	Q8WXI9	593 aa		7.34	□□□□□ -1.23
PTPN12-215	ENST00000522115	OSBPL1A	Q9BXW6	950 aa		7.34	□□□□□ -1.23
PTPN12-215	ENST00000522115	KBTBD4	Q9NVX7	518 aa		7.34	□□□□□ -1.23
PTPN12-215	ENST00000522115	LEMD3	Q9Y2U8	911 aa		7.34	□□□□□ -1.23
PTPN12-215	ENST00000522115	CSAD	Q9Y600	493 aa		7.34	□□□□□ -1.23
PTPN12-215	ENST00000522115	RECK	O95980	971 aa		7.33	□□□□□ -1.24
PTPN12-215	ENST00000522115	GART	P22102	1010 aa		7.33	□□□□□ -1.24
PTPN12-215	ENST00000522115	CDK8	P49336	464 aa		7.33	□□□□□ -1.24
PTPN12-215	ENST00000522115	CYP27C1	Q4G0S4	372 aa		7.33	□□□□□ -1.24
PTPN12-215	ENST00000522115	DUSP27	Q5VZP5	1158 aa		7.33	□□□□□ -1.24
PTPN12-215	ENST00000522115	PICK1	Q9NRD5	415 aa		7.33	□□□□□ -1.24
PTPN12-215	ENST00000522115	LRIG2	O94898	1065 aa		7.32	□□□□□ -1.24
PTPN12-215	ENST00000522115	SPINK2	P20155	84 aa		7.32	□□□□□ -1.24
PTPN12-215	ENST00000522115	FANCC	Q00597	558 aa		7.32	□□□□□ -1.24
PTPN12-215	ENST00000522115	CDK5R2	Q13319	367 aa		7.32	□□□□□ -1.24
PTPN12-215	ENST00000522115	BNC2	Q6ZN30	1099 aa	Predicted RBP	7.32	□□□□□ -1.24
PTPN12-215	ENST00000522115	ZNF765	Q7L2R6	523 aa		7.32	□□□□□ -1.24
PTPN12-215	ENST00000522115	CDC37L1	Q7L3B6	337 aa		7.32	□□□□□ -1.24
PTPN12-215	ENST00000522115	DTX1	Q86Y01	620 aa		7.32	□□□□□ -1.24
PTPN12-215	ENST00000522115	HID1	Q8IV36	788 aa		7.32	□□□□□ -1.24
PTPN12-215	ENST00000522115		Q8N3U1	123 aa		7.32	□□□□□ -1.24
PTPN12-215	ENST00000522115	TMEM87A	Q8NBN3	555 aa		7.32	□□□□□ -1.24
PTPN12-215	ENST00000522115	DUSP23	Q9BVJ7	150 aa		7.32	□□□□□ -1.24
PTPN12-215	ENST00000522115	LRRC3	Q9BY71	257 aa		7.32	□□□□□ -1.24
PTPN12-215	ENST00000522115	SSU72	Q9NP77	194 aa	Known RBP	7.32	□□□□□ -1.24
PTPN12-215	ENST00000522115	COPRS	Q9NQ92	184 aa		7.32	□□□□□ -1.24
PTPN12-215	ENST00000522115	GGT7	Q9UJ14	662 aa		7.32	□□□□□ -1.24
PTPN12-215	ENST00000522115	ROBO2	Q9HCK4	1378 aa		7.32	□□□□□ -1.24
PTPN12-215	ENST00000522115	PRR36	Q9H6K5	1346 aa		7.31	□□□□□ -1.24
PTPN12-215	ENST00000522115	PRAMEF27	A3QJZ7	478 aa		7.31	□□□□□ -1.24
PTPN12-215	ENST00000522115	HYAL3	O43820	417 aa	Predicted RBP	7.31	□□□□□ -1.24
PTPN12-215	ENST00000522115	GREM1	O60565	184 aa		7.31	□□□□□ -1.24
PTPN12-215	ENST00000522115	F13A1	P00488	732 aa		7.31	□□□□□ -1.24
PTPN12-215	ENST00000522115	ZNF76	P36508	570 aa		7.31	□□□□□ -1.24
PTPN12-215	ENST00000522115	SLBP	Q14493	270 aa	Known RBP eCLIP	7.31	□□□□□ -1.24
PTPN12-215	ENST00000522115	MSMP	Q1L6U9	139 aa		7.31	□□□□□ -1.24
PTPN12-215	ENST00000522115	FAM196A	Q6ZSG2	479 aa		7.31	□□□□□ -1.24
PTPN12-215	ENST00000522115	UBE3D	Q7Z6J8	389 aa		7.31	□□□□□ -1.24
PTPN12-215	ENST00000522115	ZFP64	Q9NPA5	681 aa		7.31	□□□□□ -1.24
PTPN12-215	ENST00000522115	ADAM30	Q9UKF2	790 aa		7.31	□□□□□ -1.24
PTPN12-215	ENST00000522115	SCAMP3	O14828	347 aa	Known RBP	7.3	□□□□□ -1.24
PTPN12-215	ENST00000522115	MED26	O95402	600 aa		7.3	□□□□□ -1.24
PTPN12-215	ENST00000522115	BPNT1	O95861	308 aa		7.3	□□□□□ -1.24
PTPN12-215	ENST00000522115	FAM87A	P0C7U9	286 aa		7.3	□□□□□ -1.24
PTPN12-215	ENST00000522115	EIF4A3	P38919	411 aa	Known RBP	7.3	□□□□□ -1.24
PTPN12-215	ENST00000522115	ETF1	P62495	437 aa	Known RBP	7.3	□□□□□ -1.24
PTPN12-215	ENST00000522115	PDE4B	Q07343	736 aa		7.3	□□□□□ -1.24
PTPN12-215	ENST00000522115	MPP2	Q14168	576 aa		7.3	□□□□□ -1.24
PTPN12-215	ENST00000522115	ARMCX6	Q7L4S7	300 aa		7.3	□□□□□ -1.24
PTPN12-215	ENST00000522115	MRPL41	Q8IXM3	137 aa	Known RBP	7.3	□□□□□ -1.24
PTPN12-215	ENST00000522115	JARID2	Q92833	1246 aa	Predicted RBP	7.3	□□□□□ -1.24
PTPN12-215	ENST00000522115	FBRS	Q9HAH7	460 aa		7.3	□□□□□ -1.24
PTPN12-215	ENST00000522115	MKNK2	Q9HBH9	465 aa		7.3	□□□□□ -1.24
PTPN12-215	ENST00000522115	LGR6	Q9HBX8	967 aa		7.3	□□□□□ -1.24
PTPN12-215	ENST00000522115	PRDM10	Q9NQV6	1147 aa		7.3	□□□□□ -1.24
PTPN12-215	ENST00000522115	KIAA1522	Q9P206	1035 aa	Predicted RBP	7.3	□□□□□ -1.24
PTPN12-215	ENST00000522115	SCO2	A0A1W2PP80	73 aa		7.29	□□□□□ -1.24
PTPN12-215	ENST00000522115		F6X3S4	739 aa		7.29	□□□□□ -1.24
PTPN12-215	ENST00000522115	CYP26A1	O43174	497 aa		7.29	□□□□□ -1.24
PTPN12-215	ENST00000522115	PRNP	P04156	253 aa		7.29	□□□□□ -1.24
PTPN12-215	ENST00000522115	GRK4	P32298	578 aa		7.29	□□□□□ -1.24
PTPN12-215	ENST00000522115	SNAP47	Q5SQN1	464 aa		7.29	□□□□□ -1.24
PTPN12-215	ENST00000522115	GOLM1	Q8NBJ4	401 aa		7.29	□□□□□ -1.24
PTPN12-215	ENST00000522115	MRRF	Q96E11	262 aa	Known RBP	7.29	□□□□□ -1.24
PTPN12-215	ENST00000522115	SUPT16H	Q9Y5B9	1047 aa	Known RBP	7.29	□□□□□ -1.24
PTPN12-215	ENST00000522115	UNCX	A6NJT0	531 aa		7.28	□□□□□ -1.24
PTPN12-215	ENST00000522115	MINDY4B	A8MYZ0	360 aa		7.28	□□□□□ -1.24
PTPN12-215	ENST00000522115	CST3	P01034	146 aa	Predicted RBP	7.28	□□□□□ -1.24
PTPN12-215	ENST00000522115	HOXA10	P31260	410 aa	Predicted RBP	7.28	□□□□□ -1.24
PTPN12-215	ENST00000522115	NKG7	Q16617	165 aa		7.28	□□□□□ -1.24
PTPN12-215	ENST00000522115	TMEM201	Q5SNT2	666 aa		7.28	□□□□□ -1.24
PTPN12-215	ENST00000522115	FBXL19	Q6PCT2	694 aa		7.28	□□□□□ -1.24
PTPN12-215	ENST00000522115	FAM214B	Q7L5A3	538 aa		7.28	□□□□□ -1.24
PTPN12-215	ENST00000522115	REC114	Q7Z4M0	266 aa		7.28	□□□□□ -1.24
PTPN12-215	ENST00000522115	MFSD2A	Q8NA29	543 aa		7.28	□□□□□ -1.24
PTPN12-215	ENST00000522115	FOXQ1	Q9C009	403 aa		7.28	□□□□□ -1.24
PTPN12-215	ENST00000522115	IGF2BP3	O00425	579 aa	Known RBP eCLIP	7.27	□□□□□ -1.25
PTPN12-215	ENST00000522115	LEFTY1	O75610	366 aa		7.27	□□□□□ -1.25
PTPN12-215	ENST00000522115	SSTR4	P31391	388 aa		7.27	□□□□□ -1.25
PTPN12-215	ENST00000522115	FAM160A1	Q05DH4	1040 aa		7.27	□□□□□ -1.25
PTPN12-215	ENST00000522115	MCAT	Q8IVS2	390 aa	Known RBP	7.27	□□□□□ -1.25
PTPN12-215	ENST00000522115	TOP6BL	Q8N6T0	577 aa		7.27	□□□□□ -1.25
PTPN12-215	ENST00000522115	ZNF296	Q8WUU4	475 aa	Predicted RBP	7.27	□□□□□ -1.25
PTPN12-215	ENST00000522115	PCMTD2	Q9NV79	361 aa		7.27	□□□□□ -1.25
PTPN12-215	ENST00000522115	ADAMTS1	Q9UHI8	967 aa		7.27	□□□□□ -1.25
PTPN12-215	ENST00000522115	PGR	P06401	933 aa		7.26	□□□□□ -1.25
PTPN12-215	ENST00000522115	SLC6A19	Q695T7	634 aa		7.26	□□□□□ -1.25
PTPN12-215	ENST00000522115	RNF34	Q969K3	372 aa		7.26	□□□□□ -1.25
PTPN12-215	ENST00000522115	TJP2	Q9UDY2	1190 aa		7.26	□□□□□ -1.25
PTPN12-215	ENST00000522115	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	7.26	□□□□□ -1.25
PTPN12-215	ENST00000522115	SLITRK5	O94991	958 aa		7.25	□□□□□ -1.25
PTPN12-215	ENST00000522115	EOMES	O95936	686 aa		7.25	□□□□□ -1.25
PTPN12-215	ENST00000522115	CWF19L2	Q2TBE0	894 aa	Known RBP	7.25	□□□□□ -1.25
PTPN12-215	ENST00000522115	C22orf34	Q6ZV56	151 aa		7.25	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms