RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 ZNF654Q8IZM8 581 aa21.51■■□□□ 1.03
TRAPPC9-210ENST00000521667 BAZ2AQ9UIF9 1905 aaKnown RBP21.51■■□□□ 1.03
TRAPPC9-210ENST00000521667 RCOR1Q9UKL0 485 aa21.51■■□□□ 1.03
TRAPPC9-210ENST00000521667 IFNAR1P17181 557 aa21.51■■□□□ 1.03
TRAPPC9-210ENST00000521667 USP5P45974 858 aa21.51■■□□□ 1.03
TRAPPC9-210ENST00000521667 IQCA1Q86XH1 822 aa21.51■■□□□ 1.03
TRAPPC9-210ENST00000521667 KLHL34Q8N239 644 aa21.51■■□□□ 1.03
TRAPPC9-210ENST00000521667 SH3RF3Q8TEJ3 882 aaPredicted RBP21.51■■□□□ 1.03
TRAPPC9-210ENST00000521667 TBC1D22AQ8WUA7 517 aa21.51■■□□□ 1.03
TRAPPC9-210ENST00000521667 USP28Q96RU2 1077 aa21.51■■□□□ 1.03
TRAPPC9-210ENST00000521667 GJB4Q9NTQ9 266 aa21.51■■□□□ 1.03
TRAPPC9-210ENST00000521667 MCM9Q9NXL9 1143 aa21.51■■□□□ 1.03
TRAPPC9-210ENST00000521667 MKRN1Q9UHC7 482 aaKnown RBP21.51■■□□□ 1.03
TRAPPC9-210ENST00000521667 CCDC196A0A1B0GTZ2 297 aa21.5■■□□□ 1.03
TRAPPC9-210ENST00000521667 CYP2D6P10635 497 aa21.5■■□□□ 1.03
TRAPPC9-210ENST00000521667 CEBPZQ03701 1054 aaKnown RBP21.5■■□□□ 1.03
TRAPPC9-210ENST00000521667 SSRP1Q08945 709 aaKnown RBP21.5■■□□□ 1.03
TRAPPC9-210ENST00000521667 BRAPQ7Z569 592 aa21.5■■□□□ 1.03
TRAPPC9-210ENST00000521667 CERS3Q8IU89 383 aa21.5■■□□□ 1.03
TRAPPC9-210ENST00000521667 ENAHQ8N8S7 591 aaPredicted RBP21.5■■□□□ 1.03
TRAPPC9-210ENST00000521667 MASTLQ96GX5 879 aa21.5■■□□□ 1.03
TRAPPC9-210ENST00000521667 PGBD1Q96JS3 809 aa21.5■■□□□ 1.03
TRAPPC9-210ENST00000521667 FMNL1O95466 1100 aaPredicted RBP21.5■■□□□ 1.03
TRAPPC9-210ENST00000521667 EVX2Q03828 476 aa21.5■■□□□ 1.03
TRAPPC9-210ENST00000521667 AIFM3Q96NN9 605 aa21.5■■□□□ 1.03
TRAPPC9-210ENST00000521667 SLC26A6Q9BXS9 759 aa21.5■■□□□ 1.03
TRAPPC9-210ENST00000521667 RTFDC1Q9BY42 306 aaPredicted RBP21.5■■□□□ 1.03
TRAPPC9-210ENST00000521667 LAMB1P07942 1786 aa21.49■■□□□ 1.03
TRAPPC9-210ENST00000521667 FAM205AQ6ZU69 1335 aa21.49■■□□□ 1.03
TRAPPC9-210ENST00000521667 LIG1P18858 919 aa21.49■■□□□ 1.03
TRAPPC9-210ENST00000521667 KIF23Q02241 960 aaPredicted RBP21.49■■□□□ 1.03
TRAPPC9-210ENST00000521667 PDE4BQ07343 736 aa21.49■■□□□ 1.03
TRAPPC9-210ENST00000521667 MFSD14BQ5SR56 506 aa21.49■■□□□ 1.03
TRAPPC9-210ENST00000521667 MPNDQ8N594 471 aa21.49■■□□□ 1.03
TRAPPC9-210ENST00000521667 FANCBQ8NB91 859 aa21.49■■□□□ 1.03
TRAPPC9-210ENST00000521667 FTOQ9C0B1 505 aaKnown RBP eCLIP21.49■■□□□ 1.031e-10■■■■■ 27.2
TRAPPC9-210ENST00000521667 COA1Q9GZY4 146 aa21.49■■□□□ 1.03
TRAPPC9-210ENST00000521667 COL11A2P13942 1736 aaPredicted RBP21.49■■□□□ 1.03
TRAPPC9-210ENST00000521667 USP17L8P0C7I0 530 aa21.48■■□□□ 1.03
TRAPPC9-210ENST00000521667 PPP2R5BQ15173 497 aa21.48■■□□□ 1.03
TRAPPC9-210ENST00000521667 IFIT1BQ5T764 474 aaKnown RBP21.48■■□□□ 1.03
TRAPPC9-210ENST00000521667 NUP133Q8WUM0 1156 aa21.48■■□□□ 1.03
TRAPPC9-210ENST00000521667 WASF1Q92558 559 aa21.48■■□□□ 1.03
TRAPPC9-210ENST00000521667 MYH15Q9Y2K3 1946 aa21.48■■□□□ 1.03
TRAPPC9-210ENST00000521667 C12orf60Q5U649 245 aa21.48■■□□□ 1.03
TRAPPC9-210ENST00000521667 KRT40Q6A162 431 aa21.48■■□□□ 1.03
TRAPPC9-210ENST00000521667 BICD2Q8TD16 824 aa21.48■■□□□ 1.03
TRAPPC9-210ENST00000521667 RIMBP2O15034 1052 aa21.47■■□□□ 1.03
TRAPPC9-210ENST00000521667 BTDP43251 543 aa21.47■■□□□ 1.03
TRAPPC9-210ENST00000521667 SLF2Q8IX21 1173 aa21.47■■□□□ 1.03
TRAPPC9-210ENST00000521667 TRIM22Q8IYM9 498 aa21.47■■□□□ 1.03
TRAPPC9-210ENST00000521667 ANP32BQ92688 251 aaKnown RBP21.47■■□□□ 1.03
TRAPPC9-210ENST00000521667 TMX4Q9H1E5 349 aaPredicted RBP21.47■■□□□ 1.03
TRAPPC9-210ENST00000521667 RTEL1Q9NZ71 1219 aa21.47■■□□□ 1.03
TRAPPC9-210ENST00000521667 GPR75-ASB3A0A0A6YYF3 556 aa21.46■■□□□ 1.03
TRAPPC9-210ENST00000521667 KIF28PB7ZC32 967 aa21.46■■□□□ 1.03
TRAPPC9-210ENST00000521667 POLR3DP05423 398 aaPredicted RBP21.46■■□□□ 1.03
TRAPPC9-210ENST00000521667 NT5C2P49902 561 aa21.46■■□□□ 1.03
TRAPPC9-210ENST00000521667 TRIM29Q14134 588 aa21.46■■□□□ 1.03
TRAPPC9-210ENST00000521667 DPP8Q6V1X1 898 aaPredicted RBP21.46■■□□□ 1.03
TRAPPC9-210ENST00000521667 FAM163AQ96GL9 167 aaPredicted RBP21.46■■□□□ 1.03
TRAPPC9-210ENST00000521667 ZC3H12CQ9C0D7 883 aaKnown RBP21.46■■□□□ 1.03
TRAPPC9-210ENST00000521667 MYSM1Q5VVJ2 828 aa21.46■■□□□ 1.03
TRAPPC9-210ENST00000521667 OLFM4Q6UX06 510 aa21.46■■□□□ 1.03
TRAPPC9-210ENST00000521667 CATIPQ7Z7H3 387 aa21.46■■□□□ 1.03
TRAPPC9-210ENST00000521667 NBPF11Q86T75 865 aa21.46■■□□□ 1.03
TRAPPC9-210ENST00000521667 AMOTL1Q8IY63 956 aa21.46■■□□□ 1.03
TRAPPC9-210ENST00000521667 TGFBRAP1Q8WUH2 860 aa21.46■■□□□ 1.03
TRAPPC9-210ENST00000521667 DDX19AQ9NUU7 478 aaKnown RBP21.46■■□□□ 1.03
TRAPPC9-210ENST00000521667 DACT1Q9NYF0 836 aa21.46■■□□□ 1.03
TRAPPC9-210ENST00000521667 GTF2IP78347 998 aa21.45■■□□□ 1.02
TRAPPC9-210ENST00000521667 CRACR2BQ8N4Y2 399 aaPredicted RBP21.45■■□□□ 1.02
TRAPPC9-210ENST00000521667 NUP62CLQ9H1M0 184 aa21.45■■□□□ 1.02
TRAPPC9-210ENST00000521667 ROBO3Q96MS0 1386 aa21.45■■□□□ 1.02
TRAPPC9-210ENST00000521667 PLCG2P16885 1265 aa21.45■■□□□ 1.02
TRAPPC9-210ENST00000521667 FAM47AQ5JRC9 791 aa21.45■■□□□ 1.02
TRAPPC9-210ENST00000521667 ZNF622Q969S3 477 aaKnown RBP eCLIP21.45■■□□□ 1.02
TRAPPC9-210ENST00000521667 GAKO14976 1311 aa21.44■■□□□ 1.02
TRAPPC9-210ENST00000521667 TSPY2A6NKD2 308 aa21.44■■□□□ 1.02
TRAPPC9-210ENST00000521667 CALM1P0DP23 149 aa21.44■■□□□ 1.02
TRAPPC9-210ENST00000521667 CALM2P0DP24 149 aa21.44■■□□□ 1.02
TRAPPC9-210ENST00000521667 CALM3P0DP25 149 aa21.44■■□□□ 1.02
TRAPPC9-210ENST00000521667 C2CD5Q86YS7 1000 aa21.44■■□□□ 1.02
TRAPPC9-210ENST00000521667 POLR3EQ9NVU0 708 aa21.44■■□□□ 1.02
TRAPPC9-210ENST00000521667 UBE2Q2LH0YL09 131 aa21.43■■□□□ 1.02
TRAPPC9-210ENST00000521667 DDAH1O94760 285 aa21.43■■□□□ 1.02
TRAPPC9-210ENST00000521667 DEXIO95424 95 aa21.43■■□□□ 1.02
TRAPPC9-210ENST00000521667 CCDC173Q0VFZ6 552 aa21.43■■□□□ 1.02
TRAPPC9-210ENST00000521667 SLC4A8Q2Y0W8 1093 aa21.43■■□□□ 1.02
TRAPPC9-210ENST00000521667 YEATS4O95619 227 aa21.43■■□□□ 1.02
TRAPPC9-210ENST00000521667 GUCY1A2P33402 732 aa21.43■■□□□ 1.02
TRAPPC9-210ENST00000521667 TROAPQ12815 778 aa21.43■■□□□ 1.02
TRAPPC9-210ENST00000521667 MAPKAPK5Q8IW41 473 aa21.43■■□□□ 1.02
TRAPPC9-210ENST00000521667 LINC00301Q8NCQ3 95 aa21.43■■□□□ 1.02
TRAPPC9-210ENST00000521667 RNF214Q8ND24 703 aa21.43■■□□□ 1.02
TRAPPC9-210ENST00000521667 FUCA2Q9BTY2 467 aa21.43■■□□□ 1.02
TRAPPC9-210ENST00000521667 RBM28Q9NW13 759 aaKnown RBP21.43■■□□□ 1.02
TRAPPC9-210ENST00000521667 SUGT1Q9Y2Z0 365 aa21.43■■□□□ 1.02
TRAPPC9-210ENST00000521667 H0YIN7 160 aa21.42■■□□□ 1.02
TRAPPC9-210ENST00000521667 NR1I2O75469 434 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms