RNA–Protein interactions for RNA: ENST00000521425.5

TRAM1-205, Transcript of translocation associated membrane protein 1, humanhuman

TSL 2 BASIC

Gene TRAM1, Length 3,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-205ENST00000521425 LINC00116Q8NCU8 138 aa20.04■□□□□ 0.8
TRAM1-205ENST00000521425 NAT10Q9H0A0 1025 aaKnown RBP20.04■□□□□ 0.8
TRAM1-205ENST00000521425 GNL3LQ9NVN8 582 aaKnown RBP20.04■□□□□ 0.8
TRAM1-205ENST00000521425 RIMBP2O15034 1052 aa20.04■□□□□ 0.8
TRAM1-205ENST00000521425 CAMTA2O94983 1202 aa20.04■□□□□ 0.8
TRAM1-205ENST00000521425 VGLL2Q8N8G2 317 aa20.04■□□□□ 0.8
TRAM1-205ENST00000521425 KCNG4Q8TDN1 519 aa20.04■□□□□ 0.8
TRAM1-205ENST00000521425 GPKOWQ92917 476 aaPredicted RBP eCLIP20.04■□□□□ 0.8
TRAM1-205ENST00000521425 ST7Q9NRC1 585 aa20.04■□□□□ 0.8
TRAM1-205ENST00000521425 USP5P45974 858 aa20.04■□□□□ 0.8
TRAM1-205ENST00000521425 ZNF654Q8IZM8 581 aa20.04■□□□□ 0.8
TRAM1-205ENST00000521425 IGDCC4Q8TDY8 1250 aa20.04■□□□□ 0.8
TRAM1-205ENST00000521425 AFDNP55196 1824 aaKnown RBP20.03■□□□□ 0.8
TRAM1-205ENST00000521425 CDKL5O76039 1030 aa20.03■□□□□ 0.8
TRAM1-205ENST00000521425 USP17L8P0C7I0 530 aa20.03■□□□□ 0.8
TRAM1-205ENST00000521425 FMR1NBQ8N0W7 255 aaPredicted RBP20.03■□□□□ 0.8
TRAM1-205ENST00000521425 NLRP3Q96P20 1036 aa20.03■□□□□ 0.8
TRAM1-205ENST00000521425 UBE3CQ15386 1083 aa20.03■□□□□ 0.8
TRAM1-205ENST00000521425 BLZF1Q9H2G9 400 aa20.03■□□□□ 0.8
TRAM1-205ENST00000521425 ZSWIM4Q9H7M6 989 aa20.03■□□□□ 0.8
TRAM1-205ENST00000521425 VWA3AA6NCI4 1184 aa20.03■□□□□ 0.8
TRAM1-205ENST00000521425 MCM7P33993 719 aa20.03■□□□□ 0.8
TRAM1-205ENST00000521425 EPSTI1Q96J88 318 aa20.03■□□□□ 0.8
TRAM1-205ENST00000521425 KCNH3Q9ULD8 1083 aa20.03■□□□□ 0.8
TRAM1-205ENST00000521425 PCDHA5Q9Y5H7 936 aa20.03■□□□□ 0.8
TRAM1-205ENST00000521425 MROH5Q6ZUA9 1318 aa20.02■□□□□ 0.8
TRAM1-205ENST00000521425 SHC4Q6S5L8 630 aa20.02■□□□□ 0.8
TRAM1-205ENST00000521425 CCDC112Q8NEF3 446 aa20.02■□□□□ 0.8
TRAM1-205ENST00000521425 SERTAD1Q9UHV2 236 aa20.02■□□□□ 0.8
TRAM1-205ENST00000521425 DPF2Q92785 391 aa20.02■□□□□ 0.8
TRAM1-205ENST00000521425 FANCLQ9NW38 375 aa20.02■□□□□ 0.8
TRAM1-205ENST00000521425 CCNL1Q9UK58 526 aaPredicted RBP20.02■□□□□ 0.8
TRAM1-205ENST00000521425 ZNF652Q9Y2D9 606 aa20.02■□□□□ 0.8
TRAM1-205ENST00000521425 ZMYM6O95789 1325 aa20.02■□□□□ 0.79
TRAM1-205ENST00000521425 SLURP2P0DP57 97 aa20.01■□□□□ 0.79
TRAM1-205ENST00000521425 IQCB1Q15051 598 aa20.01■□□□□ 0.79
TRAM1-205ENST00000521425 DHX40Q8IX18 779 aaKnown RBP20.01■□□□□ 0.79
TRAM1-205ENST00000521425 RTEL1Q9NZ71 1219 aa20.01■□□□□ 0.79
TRAM1-205ENST00000521425 TMEM232C9JQI7 657 aa20.01■□□□□ 0.79
TRAM1-205ENST00000521425 SLFN14P0C7P3 912 aa20.01■□□□□ 0.79
TRAM1-205ENST00000521425 MINPP1Q9UNW1 487 aa20.01■□□□□ 0.79
TRAM1-205ENST00000521425 RIC1Q4ADV7 1423 aa20.01■□□□□ 0.79
TRAM1-205ENST00000521425 FAM170AA1A519 330 aa20.01■□□□□ 0.79
TRAM1-205ENST00000521425 PICALMQ13492 652 aa20.01■□□□□ 0.79
TRAM1-205ENST00000521425 OLFM4Q6UX06 510 aa20.01■□□□□ 0.79
TRAM1-205ENST00000521425 MAPKAPK5Q8IW41 473 aa20.01■□□□□ 0.79
TRAM1-205ENST00000521425 FANCBQ8NB91 859 aa20.01■□□□□ 0.79
TRAM1-205ENST00000521425 PRR29P0C7W0 189 aa20■□□□□ 0.79
TRAM1-205ENST00000521425 RFC4P35249 363 aa20■□□□□ 0.79
TRAM1-205ENST00000521425 UBASH3AP57075 661 aa20■□□□□ 0.79
TRAM1-205ENST00000521425 RPS8P62241 208 aaKnown RBP20■□□□□ 0.79
TRAM1-205ENST00000521425 MKNK2Q9HBH9 465 aa20■□□□□ 0.79
TRAM1-205ENST00000521425 EARS2Q5JPH6 523 aaKnown RBP20■□□□□ 0.79
TRAM1-205ENST00000521425 CAPN2P17655 700 aa20■□□□□ 0.79
TRAM1-205ENST00000521425 PIK3AP1Q6ZUJ8 805 aa20■□□□□ 0.79
TRAM1-205ENST00000521425 ENGASEQ8NFI3 743 aa20■□□□□ 0.79
TRAM1-205ENST00000521425 GNL3Q9BVP2 549 aaKnown RBP eCLIP20■□□□□ 0.79
TRAM1-205ENST00000521425 NLRP5P59047 1200 aa19.99■□□□□ 0.79
TRAM1-205ENST00000521425 PTPN14Q15678 1187 aa19.99■□□□□ 0.79
TRAM1-205ENST00000521425 IQCA1Q86XH1 822 aa19.99■□□□□ 0.79
TRAM1-205ENST00000521425 ESR2Q92731 530 aa19.99■□□□□ 0.79
TRAM1-205ENST00000521425 FAM217BQ9NTX9 383 aaPredicted RBP19.99■□□□□ 0.79
TRAM1-205ENST00000521425 C6orf229H3BNL8 230 aa19.99■□□□□ 0.79
TRAM1-205ENST00000521425 NTSR2O95665 410 aa19.99■□□□□ 0.79
TRAM1-205ENST00000521425 SFPQP23246 707 aaKnown RBP eCLIP19.99■□□□□ 0.79
TRAM1-205ENST00000521425 GTF2F1P35269 517 aaKnown RBP eCLIP19.99■□□□□ 0.79
TRAM1-205ENST00000521425 TPM4P67936 248 aa19.99■□□□□ 0.79
TRAM1-205ENST00000521425 NFIXQ14938 502 aa19.99■□□□□ 0.79
TRAM1-205ENST00000521425 FEZ1Q99689 392 aa19.99■□□□□ 0.79
TRAM1-205ENST00000521425 TCRBV5S4A2TA0A5A2 114 aa19.98■□□□□ 0.79
TRAM1-205ENST00000521425 ADKP55263 362 aaKnown RBP19.98■□□□□ 0.79
TRAM1-205ENST00000521425 LRRC8AQ8IWT6 810 aa19.98■□□□□ 0.79
TRAM1-205ENST00000521425 TDRD7Q8NHU6 1098 aaKnown RBP19.98■□□□□ 0.79
TRAM1-205ENST00000521425 FAM84BQ96KN1 310 aaPredicted RBP19.98■□□□□ 0.79
TRAM1-205ENST00000521425 USP17L3A6NCW0 530 aa19.98■□□□□ 0.79
TRAM1-205ENST00000521425 USP17L4A6NCW7 530 aa19.98■□□□□ 0.79
TRAM1-205ENST00000521425 MECOMQ03112 1051 aa19.98■□□□□ 0.79
TRAM1-205ENST00000521425 NCBP1Q09161 790 aaKnown RBP19.98■□□□□ 0.79
TRAM1-205ENST00000521425 USP17L1Q7RTZ2 530 aa19.98■□□□□ 0.79
TRAM1-205ENST00000521425 CATIPQ7Z7H3 387 aa19.98■□□□□ 0.79
TRAM1-205ENST00000521425 TGFBRAP1Q8WUH2 860 aa19.98■□□□□ 0.79
TRAM1-205ENST00000521425 KRT23Q9C075 422 aa19.98■□□□□ 0.79
TRAM1-205ENST00000521425 WNT7AO00755 349 aa19.97■□□□□ 0.79
TRAM1-205ENST00000521425 HIBADHP31937 336 aaKnown RBP19.97■□□□□ 0.79
TRAM1-205ENST00000521425 SYT10Q6XYQ8 523 aa19.97■□□□□ 0.79
TRAM1-205ENST00000521425 NOSTRINQ8IVI9 506 aa19.97■□□□□ 0.79
TRAM1-205ENST00000521425 JMYQ8N9B5 988 aa19.97■□□□□ 0.79
TRAM1-205ENST00000521425 ALDH8A1Q9H2A2 487 aaPredicted RBP19.97■□□□□ 0.79
TRAM1-205ENST00000521425 BCL9O00512 1426 aa19.97■□□□□ 0.79
TRAM1-205ENST00000521425 CTAGE5O15320 804 aa19.97■□□□□ 0.79
TRAM1-205ENST00000521425 SLC39A14Q15043 492 aa19.97■□□□□ 0.79
TRAM1-205ENST00000521425 CEP135Q66GS9 1140 aa19.97■□□□□ 0.79
TRAM1-205ENST00000521425 FANCCQ00597 558 aa19.96■□□□□ 0.79
TRAM1-205ENST00000521425 TERF2Q15554 542 aa19.96■□□□□ 0.79
TRAM1-205ENST00000521425 GRIK5Q16478 980 aa19.96■□□□□ 0.79
TRAM1-205ENST00000521425 AXDND1Q5T1B0 1012 aaPredicted RBP19.96■□□□□ 0.79
TRAM1-205ENST00000521425 BRAPQ7Z569 592 aa19.96■□□□□ 0.79
TRAM1-205ENST00000521425 CLEC10AQ8IUN9 316 aa19.96■□□□□ 0.79
TRAM1-205ENST00000521425 ENAHQ8N8S7 591 aaPredicted RBP19.96■□□□□ 0.79
TRAM1-205ENST00000521425 CSRNP2Q9H175 543 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms