RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 TRIM75PA6NK02 468 aa30.91■■■□□ 2.54
VEGFA-220ENST00000519767 HMMRO75330 724 aa30.91■■■□□ 2.54
VEGFA-220ENST00000519767 CAP2P40123 477 aa30.91■■■□□ 2.54
VEGFA-220ENST00000519767 AACSQ86V21 672 aa30.91■■■□□ 2.54
VEGFA-220ENST00000519767 FOXP4Q8IVH2 680 aaPredicted RBP30.91■■■□□ 2.54
VEGFA-220ENST00000519767 FMNL1O95466 1100 aaPredicted RBP30.9■■■□□ 2.54
VEGFA-220ENST00000519767 CYP2C8P10632 490 aa30.9■■■□□ 2.54
VEGFA-220ENST00000519767 TGFBRAP1Q8WUH2 860 aa30.9■■■□□ 2.54
VEGFA-220ENST00000519767 ZBTB40Q9NUA8 1239 aa30.9■■■□□ 2.54
VEGFA-220ENST00000519767 POTEFA5A3E0 1075 aa30.89■■■□□ 2.54
VEGFA-220ENST00000519767 FAM196BA6NMK8 535 aa30.89■■■□□ 2.54
VEGFA-220ENST00000519767 BCRP11274 1271 aa30.89■■■□□ 2.54
VEGFA-220ENST00000519767 CYP7A1P22680 504 aa30.89■■■□□ 2.54
VEGFA-220ENST00000519767 ADGRA1Q86SQ6 560 aa30.89■■■□□ 2.54
VEGFA-220ENST00000519767 RCAN3Q9UKA8 241 aa30.89■■■□□ 2.54
VEGFA-220ENST00000519767 KIAA0100Q14667 2235 aaKnown RBP30.89■■■□□ 2.53
VEGFA-220ENST00000519767 CENPFP49454 3210 aa30.88■■■□□ 2.53
VEGFA-220ENST00000519767 IDH1O75874 414 aaKnown RBP30.88■■■□□ 2.53
VEGFA-220ENST00000519767 ZNF280CQ8ND82 737 aa30.88■■■□□ 2.53
VEGFA-220ENST00000519767 RHPN1Q8TCX5 695 aa30.88■■■□□ 2.53
VEGFA-220ENST00000519767 TRIM47Q96LD4 638 aa30.88■■■□□ 2.53
VEGFA-220ENST00000519767 SRRDQ9UH36 339 aa30.88■■■□□ 2.53
VEGFA-220ENST00000519767 COG6Q9Y2V7 657 aa30.88■■■□□ 2.53
VEGFA-220ENST00000519767 USP17L5A8MUK1 530 aa30.87■■■□□ 2.53
VEGFA-220ENST00000519767 MAP3K12Q12852 859 aa30.87■■■□□ 2.53
VEGFA-220ENST00000519767 METTL16Q86W50 562 aaKnown RBP30.87■■■□□ 2.53
VEGFA-220ENST00000519767 MAPKAPK5Q8IW41 473 aa30.87■■■□□ 2.53
VEGFA-220ENST00000519767 PROCA1Q8NCQ7 364 aaPredicted RBP30.87■■■□□ 2.53
VEGFA-220ENST00000519767 AGTPBP1Q9UPW5 1226 aa30.87■■■□□ 2.53
VEGFA-220ENST00000519767 SPP2Q13103 211 aa30.86■■■□□ 2.53
VEGFA-220ENST00000519767 CLASRPQ8N2M8 674 aaKnown RBP30.86■■■□□ 2.53
VEGFA-220ENST00000519767 KIF1BPQ96EK5 621 aa30.86■■■□□ 2.53
VEGFA-220ENST00000519767 FLT1P17948 1338 aa30.86■■■□□ 2.53
VEGFA-220ENST00000519767 CTGFP29279 349 aa30.85■■■□□ 2.53
VEGFA-220ENST00000519767 FCGRTP55899 365 aa30.85■■■□□ 2.53
VEGFA-220ENST00000519767 PRPF38BQ5VTL8 546 aaKnown RBP30.85■■■□□ 2.53
VEGFA-220ENST00000519767 TRIM34Q9BYJ4 488 aa30.85■■■□□ 2.53
VEGFA-220ENST00000519767 AS3MTQ9HBK9 375 aa30.85■■■□□ 2.53
VEGFA-220ENST00000519767 GINM1Q9NU53 330 aa30.85■■■□□ 2.53
VEGFA-220ENST00000519767 RAB11FIP3O75154 756 aa30.84■■■□□ 2.53
VEGFA-220ENST00000519767 OSBPP22059 807 aa30.84■■■□□ 2.53
VEGFA-220ENST00000519767 TTF1Q15361 905 aaPredicted RBP30.84■■■□□ 2.53
VEGFA-220ENST00000519767 SLC4A8Q2Y0W8 1093 aa30.84■■■□□ 2.53
VEGFA-220ENST00000519767 CCDC84Q86UT8 332 aaPredicted RBP30.84■■■□□ 2.53
VEGFA-220ENST00000519767 CRACR2BQ8N4Y2 399 aaPredicted RBP30.84■■■□□ 2.53
VEGFA-220ENST00000519767 SMCR8Q8TEV9 937 aaPredicted RBP30.84■■■□□ 2.53
VEGFA-220ENST00000519767 IL1RAPL2Q9NP60 686 aa30.84■■■□□ 2.53
VEGFA-220ENST00000519767 FRMD4AQ9P2Q2 1039 aaPredicted RBP30.84■■■□□ 2.53
VEGFA-220ENST00000519767 PNMA3Q9UL41 463 aa30.84■■■□□ 2.53
VEGFA-220ENST00000519767 HLA-DOAP06340 250 aa30.83■■■□□ 2.53
VEGFA-220ENST00000519767 ASNSP08243 561 aa30.83■■■□□ 2.53
VEGFA-220ENST00000519767 PABPC4Q13310 644 aaKnown RBP eCLIP30.83■■■□□ 2.536e-13■■■■■ 112.3
VEGFA-220ENST00000519767 RRP1BQ14684 758 aaKnown RBP30.83■■■□□ 2.53
VEGFA-220ENST00000519767 MAGEB6Q8N7X4 407 aa30.83■■■□□ 2.53
VEGFA-220ENST00000519767 RAET1EQ8TD07 263 aa30.83■■■□□ 2.53
VEGFA-220ENST00000519767 WDR18Q9BV38 432 aa30.83■■■□□ 2.53
VEGFA-220ENST00000519767 PALD1Q9ULE6 856 aa30.83■■■□□ 2.53
VEGFA-220ENST00000519767 EN2P19622 333 aaPredicted RBP30.82■■■□□ 2.52
VEGFA-220ENST00000519767 DYNLL1P63167 89 aaKnown RBP30.82■■■□□ 2.52
VEGFA-220ENST00000519767 SIRT2Q8IXJ6 389 aa30.82■■■□□ 2.52
VEGFA-220ENST00000519767 SH3TC2Q8TF17 1288 aa30.82■■■□□ 2.52
VEGFA-220ENST00000519767 ECM2O94769 699 aaPredicted RBP30.81■■■□□ 2.52
VEGFA-220ENST00000519767 PDE3AQ14432 1141 aa30.81■■■□□ 2.52
VEGFA-220ENST00000519767 ANTXR1Q9H6X2 564 aa30.81■■■□□ 2.52
VEGFA-220ENST00000519767 DOCK1Q14185 1865 aa30.8■■■□□ 2.52
VEGFA-220ENST00000519767 MYPNQ86TC9 1320 aa30.8■■■□□ 2.52
VEGFA-220ENST00000519767 IFIT2P09913 472 aaKnown RBP30.8■■■□□ 2.52
VEGFA-220ENST00000519767 SH3D19Q5HYK7 790 aa30.8■■■□□ 2.52
VEGFA-220ENST00000519767 MIGA1Q8NAN2 632 aa30.8■■■□□ 2.52
VEGFA-220ENST00000519767 PPIL4Q8WUA2 492 aaKnown RBP eCLIP30.8■■■□□ 2.52
VEGFA-220ENST00000519767 NDUFB9Q9Y6M9 179 aa30.8■■■□□ 2.52
VEGFA-220ENST00000519767 USP5P45974 858 aa30.79■■■□□ 2.52
VEGFA-220ENST00000519767 TREML2Q5T2D2 321 aa30.79■■■□□ 2.52
VEGFA-220ENST00000519767 APBB1O00213 710 aa30.78■■■□□ 2.52
VEGFA-220ENST00000519767 GRK4P32298 578 aa30.78■■■□□ 2.52
VEGFA-220ENST00000519767 HMGCS2P54868 508 aa30.78■■■□□ 2.52
VEGFA-220ENST00000519767 SAP30BPQ9UHR5 308 aaKnown RBP30.78■■■□□ 2.52
VEGFA-220ENST00000519767 MAST2Q6P0Q8 1798 aa30.77■■■□□ 2.52
VEGFA-220ENST00000519767 GCLCP48506 637 aaPredicted RBP30.77■■■□□ 2.52
VEGFA-220ENST00000519767 C19orf81C9J6K1 198 aa30.76■■■□□ 2.51
VEGFA-220ENST00000519767 BACE1P56817 501 aa30.76■■■□□ 2.51
VEGFA-220ENST00000519767 TTC6Q86TZ1 520 aa30.76■■■□□ 2.51
VEGFA-220ENST00000519767 DNAJC18Q9H819 358 aa30.76■■■□□ 2.51
VEGFA-220ENST00000519767 PRKCZQ05513 592 aa30.75■■■□□ 2.51
VEGFA-220ENST00000519767 TMOD4Q9NZQ9 345 aa30.75■■■□□ 2.51
VEGFA-220ENST00000519767 MYCP01106 439 aaPredicted RBP30.74■■■□□ 2.51
VEGFA-220ENST00000519767 FAM110CQ1W6H9 321 aa30.74■■■□□ 2.51
VEGFA-220ENST00000519767 SLC9C2Q5TAH2 1124 aa30.74■■■□□ 2.51
VEGFA-220ENST00000519767 ANKRD13CQ8N6S4 541 aa30.74■■■□□ 2.51
VEGFA-220ENST00000519767 EHD4Q9H223 541 aa30.74■■■□□ 2.51
VEGFA-220ENST00000519767 PHIPQ8WWQ0 1821 aa30.74■■■□□ 2.51
VEGFA-220ENST00000519767 MAGEB6P1A0A0J9YX57 407 aa30.73■■■□□ 2.51
VEGFA-220ENST00000519767 USP17L10C9JJH3 530 aa30.73■■■□□ 2.51
VEGFA-220ENST00000519767 TNPO2O14787 897 aaKnown RBP30.73■■■□□ 2.51
VEGFA-220ENST00000519767 SLAIN1Q8ND83 568 aa30.73■■■□□ 2.51
VEGFA-220ENST00000519767 ASCC2Q9H1I8 757 aaPredicted RBP30.73■■■□□ 2.51
VEGFA-220ENST00000519767 BIN2Q9UBW5 565 aaPredicted RBP30.73■■■□□ 2.51
VEGFA-220ENST00000519767 SERPINB13Q9UIV8 391 aa30.73■■■□□ 2.51
VEGFA-220ENST00000519767 UBXN2AP68543 259 aa30.72■■■□□ 2.51
VEGFA-220ENST00000519767 JAG1P78504 1218 aa30.72■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 1092.8 ms