RNA–Protein interactions for RNA: ENST00000519480.5

MCPH1-203, Transcript of microcephalin 1, humanhuman

TSL 1 (best) BASIC

Gene MCPH1, Length 2,917 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-203ENST00000519480 SUPT20HQ8NEM7 779 aa11.76□□□□□ -0.53
MCPH1-203ENST00000519480 TNPO1Q92973 898 aaKnown RBP11.76□□□□□ -0.53
MCPH1-203ENST00000519480 SMC3Q9UQE7 1217 aa11.76□□□□□ -0.53
MCPH1-203ENST00000519480 NFKBIEO00221 500 aa11.76□□□□□ -0.53
MCPH1-203ENST00000519480 PSMD14O00487 310 aa11.76□□□□□ -0.53
MCPH1-203ENST00000519480 NMT2O60551 498 aa11.76□□□□□ -0.53
MCPH1-203ENST00000519480 GJB2P29033 226 aa11.76□□□□□ -0.53
MCPH1-203ENST00000519480 CRKP46108 304 aa11.76□□□□□ -0.53
MCPH1-203ENST00000519480 ZMYM6O95789 1325 aa11.75□□□□□ -0.53
MCPH1-203ENST00000519480 BRCA1P38398 1863 aaKnown RBP11.75□□□□□ -0.53
MCPH1-203ENST00000519480 IFIT3O14879 490 aaKnown RBP11.75□□□□□ -0.53
MCPH1-203ENST00000519480 POLR3DP05423 398 aaPredicted RBP11.75□□□□□ -0.53
MCPH1-203ENST00000519480 TMEM67Q5HYA8 995 aa11.75□□□□□ -0.53
MCPH1-203ENST00000519480 STAG1Q8WVM7 1258 aa11.75□□□□□ -0.53
MCPH1-203ENST00000519480 ZSCAN31Q96LW9 406 aaPredicted RBP11.75□□□□□ -0.53
MCPH1-203ENST00000519480 SPON1Q9HCB6 807 aa11.75□□□□□ -0.53
MCPH1-203ENST00000519480 DDX4Q9NQI0 724 aaKnown RBP11.75□□□□□ -0.53
MCPH1-203ENST00000519480 ATP8A2Q9NTI2 1148 aa11.75□□□□□ -0.53
MCPH1-203ENST00000519480 USP40Q9NVE5 1235 aa11.75□□□□□ -0.53
MCPH1-203ENST00000519480 ZDHHC9Q9Y397 364 aa11.75□□□□□ -0.53
MCPH1-203ENST00000519480 IARSP41252 1262 aaKnown RBP11.75□□□□□ -0.53
MCPH1-203ENST00000519480 PPP4CP60510 307 aa11.75□□□□□ -0.53
MCPH1-203ENST00000519480 TCP10Q12799 353 aa11.75□□□□□ -0.53
MCPH1-203ENST00000519480 NFIAQ12857 509 aa11.75□□□□□ -0.53
MCPH1-203ENST00000519480 NFXL1Q6ZNB6 911 aa11.75□□□□□ -0.53
MCPH1-203ENST00000519480 TEKT1Q969V4 418 aa11.75□□□□□ -0.53
MCPH1-203ENST00000519480 FHDC1Q9C0D6 1143 aaPredicted RBP11.75□□□□□ -0.53
MCPH1-203ENST00000519480 TAOK3Q9H2K8 898 aa11.75□□□□□ -0.53
MCPH1-203ENST00000519480 SH2B1Q9NRF2 756 aaPredicted RBP11.75□□□□□ -0.53
MCPH1-203ENST00000519480 CD2APQ9Y5K6 639 aa11.75□□□□□ -0.53
MCPH1-203ENST00000519480 GAKO14976 1311 aa11.74□□□□□ -0.53
MCPH1-203ENST00000519480 FLT1P17948 1338 aa11.74□□□□□ -0.53
MCPH1-203ENST00000519480 SHTN1A0MZ66 631 aa11.74□□□□□ -0.53
MCPH1-203ENST00000519480 GOLGA8BA8MQT2 603 aa11.74□□□□□ -0.53
MCPH1-203ENST00000519480 MYCNP04198 464 aaPredicted RBP11.74□□□□□ -0.53
MCPH1-203ENST00000519480 PDIA3P30101 505 aaKnown RBP11.74□□□□□ -0.53
MCPH1-203ENST00000519480 MICU3Q86XE3 530 aa11.74□□□□□ -0.53
MCPH1-203ENST00000519480 GTF3C6Q969F1 213 aa11.74□□□□□ -0.53
MCPH1-203ENST00000519480 MKRN1Q9UHC7 482 aaKnown RBP11.74□□□□□ -0.53
MCPH1-203ENST00000519480 SCAF8Q9UPN6 1271 aaKnown RBP11.74□□□□□ -0.53
MCPH1-203ENST00000519480 MTMR7Q9Y216 660 aa11.74□□□□□ -0.53
MCPH1-203ENST00000519480 PRELPP51888 382 aa11.74□□□□□ -0.53
MCPH1-203ENST00000519480 APOBEC3HQ6NTF7 200 aaKnown RBP11.74□□□□□ -0.53
MCPH1-203ENST00000519480 CDC42EP5Q6NZY7 148 aa11.74□□□□□ -0.53
MCPH1-203ENST00000519480 ZFPM1Q8IX07 1006 aa11.74□□□□□ -0.53
MCPH1-203ENST00000519480 NIM1KQ8IY84 436 aa11.74□□□□□ -0.53
MCPH1-203ENST00000519480 ALDH8A1Q9H2A2 487 aaPredicted RBP11.74□□□□□ -0.53
MCPH1-203ENST00000519480 NAV1Q8NEY1 1877 aa11.74□□□□□ -0.53
MCPH1-203ENST00000519480 SH2B2O14492 632 aaPredicted RBP11.73□□□□□ -0.53
MCPH1-203ENST00000519480 SETQ01105 290 aaPredicted RBP11.73□□□□□ -0.53
MCPH1-203ENST00000519480 RAB3GAP1Q15042 981 aa11.73□□□□□ -0.53
MCPH1-203ENST00000519480 SLF2Q8IX21 1173 aa11.73□□□□□ -0.53
MCPH1-203ENST00000519480 IGDCC4Q8TDY8 1250 aa11.73□□□□□ -0.53
MCPH1-203ENST00000519480 INTS4Q96HW7 963 aaKnown RBP11.73□□□□□ -0.53
MCPH1-203ENST00000519480 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.73□□□□□ -0.53
MCPH1-203ENST00000519480 MYH1P12882 1939 aa11.73□□□□□ -0.53
MCPH1-203ENST00000519480 C12orf60Q5U649 245 aa11.73□□□□□ -0.53
MCPH1-203ENST00000519480 KRT23Q9C075 422 aa11.73□□□□□ -0.53
MCPH1-203ENST00000519480 LY9Q9HBG7 655 aa11.73□□□□□ -0.53
MCPH1-203ENST00000519480 ANGEL1Q9UNK9 670 aaKnown RBP11.73□□□□□ -0.53
MCPH1-203ENST00000519480 ZNF646O15015 1829 aaPredicted RBP11.73□□□□□ -0.53
MCPH1-203ENST00000519480 WDHD1O75717 1129 aaPredicted RBP11.73□□□□□ -0.53
MCPH1-203ENST00000519480 FAM163AQ96GL9 167 aaPredicted RBP11.73□□□□□ -0.53
MCPH1-203ENST00000519480 AGXT2Q9BYV1 514 aa11.73□□□□□ -0.53
MCPH1-203ENST00000519480 TDRD3Q9H7E2 651 aaKnown RBP11.73□□□□□ -0.53
MCPH1-203ENST00000519480 ARPP21Q9UBL0 812 aaPredicted RBP11.73□□□□□ -0.53
MCPH1-203ENST00000519480 FAM196BA6NMK8 535 aa11.72□□□□□ -0.53
MCPH1-203ENST00000519480 CTDNEP1O95476 244 aa11.72□□□□□ -0.53
MCPH1-203ENST00000519480 CXCL9Q07325 125 aa11.72□□□□□ -0.53
MCPH1-203ENST00000519480 GIMAP6Q6P9H5 292 aa11.72□□□□□ -0.53
MCPH1-203ENST00000519480 CMTR1Q8N1G2 835 aaKnown RBP11.72□□□□□ -0.53
MCPH1-203ENST00000519480 RNF41Q9H4P4 317 aaPredicted RBP11.72□□□□□ -0.53
MCPH1-203ENST00000519480 CNNM2Q9H8M5 875 aa11.72□□□□□ -0.53
MCPH1-203ENST00000519480 ANAPC4Q9UJX5 808 aa11.72□□□□□ -0.53
MCPH1-203ENST00000519480 CIZ1Q9ULV3 898 aaPredicted RBP11.72□□□□□ -0.53
MCPH1-203ENST00000519480 HPS5Q9UPZ3 1129 aa11.72□□□□□ -0.53
MCPH1-203ENST00000519480 TIAM2Q8IVF5 1701 aa11.72□□□□□ -0.53
MCPH1-203ENST00000519480 FER1L6Q2WGJ9 1857 aa11.72□□□□□ -0.53
MCPH1-203ENST00000519480 CLRN2A0PK11 232 aa11.72□□□□□ -0.53
MCPH1-203ENST00000519480 VPS37CA5D8V6 355 aaPredicted RBP11.72□□□□□ -0.53
MCPH1-203ENST00000519480 RAD21O60216 631 aa11.72□□□□□ -0.53
MCPH1-203ENST00000519480 PFKFB2O60825 505 aa11.72□□□□□ -0.53
MCPH1-203ENST00000519480 SYT1P21579 422 aa11.72□□□□□ -0.53
MCPH1-203ENST00000519480 CFAP100Q494V2 611 aa11.72□□□□□ -0.53
MCPH1-203ENST00000519480 CCDC82Q8N4S0 544 aa11.72□□□□□ -0.53
MCPH1-203ENST00000519480 ESR2Q92731 530 aa11.72□□□□□ -0.53
MCPH1-203ENST00000519480 PRMT6Q96LA8 375 aaPredicted RBP11.72□□□□□ -0.53
MCPH1-203ENST00000519480 UBAC1Q9BSL1 405 aa11.72□□□□□ -0.53
MCPH1-203ENST00000519480 MKNK2Q9HBH9 465 aa11.72□□□□□ -0.53
MCPH1-203ENST00000519480 TMEM51Q9NW97 253 aa11.72□□□□□ -0.53
MCPH1-203ENST00000519480 ZNRF3Q9ULT6 936 aa11.72□□□□□ -0.53
MCPH1-203ENST00000519480 LAMB1P07942 1786 aa11.72□□□□□ -0.53
MCPH1-203ENST00000519480 BAZ2BQ9UIF8 2168 aaKnown RBP11.72□□□□□ -0.53
MCPH1-203ENST00000519480 TNKSO95271 1327 aa11.72□□□□□ -0.53
MCPH1-203ENST00000519480 CLGNO14967 610 aa11.71□□□□□ -0.53
MCPH1-203ENST00000519480 ADD1P35611 737 aaKnown RBP11.71□□□□□ -0.53
MCPH1-203ENST00000519480 MAPK8IP2Q13387 824 aaPredicted RBP11.71□□□□□ -0.53
MCPH1-203ENST00000519480 RSBN1LQ6PCB5 846 aaPredicted RBP11.71□□□□□ -0.53
MCPH1-203ENST00000519480 NUP133Q8WUM0 1156 aa11.71□□□□□ -0.53
MCPH1-203ENST00000519480 SUGT1Q9Y2Z0 365 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms