RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 NTF4P34130 210 aa5.57□□□□□ -1.52
RNU4-49P-201ENST00000516080 AOC3Q16853 763 aa5.57□□□□□ -1.52
RNU4-49P-201ENST00000516080 ZNF507Q8TCN5 953 aa5.57□□□□□ -1.52
RNU4-49P-201ENST00000516080 ARID1BQ8NFD5 2236 aaPredicted RBP5.56□□□□□ -1.52
RNU4-49P-201ENST00000516080 BTBD11A6QL63 1104 aa5.56□□□□□ -1.52
RNU4-49P-201ENST00000516080 PRPF40AO75400 957 aaKnown RBP5.56□□□□□ -1.52
RNU4-49P-201ENST00000516080 CELA3AP09093 270 aa5.56□□□□□ -1.52
RNU4-49P-201ENST00000516080 EIF4BP23588 611 aaKnown RBP5.56□□□□□ -1.52
RNU4-49P-201ENST00000516080 GNA15P30679 374 aa5.56□□□□□ -1.52
RNU4-49P-201ENST00000516080 RASIP1Q5U651 963 aa5.56□□□□□ -1.52
RNU4-49P-201ENST00000516080 ANGEL2Q5VTE6 544 aaKnown RBP5.56□□□□□ -1.52
RNU4-49P-201ENST00000516080 FAM214BQ7L5A3 538 aa5.56□□□□□ -1.52
RNU4-49P-201ENST00000516080 HDXQ7Z353 690 aa5.56□□□□□ -1.52
RNU4-49P-201ENST00000516080 PI4K2BQ8TCG2 481 aa5.56□□□□□ -1.52
RNU4-49P-201ENST00000516080 HEXIM2Q96MH2 286 aaKnown RBP5.56□□□□□ -1.52
RNU4-49P-201ENST00000516080 TNKS2Q9H2K2 1166 aa5.56□□□□□ -1.52
RNU4-49P-201ENST00000516080 TTF2Q9UNY4 1162 aaKnown RBP5.56□□□□□ -1.52
RNU4-49P-201ENST00000516080 PLAGL2Q9UPG8 496 aa5.56□□□□□ -1.52
RNU4-49P-201ENST00000516080 U3KQE9 123 aa5.56□□□□□ -1.52
RNU4-49P-201ENST00000516080 ITIH2P19823 946 aa5.55□□□□□ -1.52
RNU4-49P-201ENST00000516080 ATG4DQ86TL0 474 aaPredicted RBP5.55□□□□□ -1.52
RNU4-49P-201ENST00000516080 ASB11Q8WXH4 323 aa5.55□□□□□ -1.52
RNU4-49P-201ENST00000516080 GNAT3A8MTJ3 354 aa5.54□□□□□ -1.52
RNU4-49P-201ENST00000516080 LRIG2O94898 1065 aa5.54□□□□□ -1.52
RNU4-49P-201ENST00000516080 PAPLNO95428 1278 aa5.54□□□□□ -1.52
RNU4-49P-201ENST00000516080 RPS26P62854 115 aaKnown RBP5.54□□□□□ -1.52
RNU4-49P-201ENST00000516080 TTBK2Q6IQ55 1244 aa5.54□□□□□ -1.52
RNU4-49P-201ENST00000516080 OGFOD2Q6N063 350 aa5.54□□□□□ -1.52
RNU4-49P-201ENST00000516080 LRFN4Q6PJG9 635 aa5.54□□□□□ -1.52
RNU4-49P-201ENST00000516080 ARMCX6Q7L4S7 300 aa5.54□□□□□ -1.52
RNU4-49P-201ENST00000516080 CYFIP1Q7L576 1253 aa5.54□□□□□ -1.52
RNU4-49P-201ENST00000516080 UBE3DQ7Z6J8 389 aa5.54□□□□□ -1.52
RNU4-49P-201ENST00000516080 POU5F2Q8N7G0 328 aa5.54□□□□□ -1.52
RNU4-49P-201ENST00000516080 RC3H2Q9HBD1 1191 aaKnown RBP5.54□□□□□ -1.52
RNU4-49P-201ENST00000516080 PRDM5Q9NQX1 630 aaPredicted RBP5.54□□□□□ -1.52
RNU4-49P-201ENST00000516080 MBNL3Q9NUK0 354 aaKnown RBP5.54□□□□□ -1.52
RNU4-49P-201ENST00000516080 SNCAIPQ9Y6H5 919 aa5.54□□□□□ -1.52
RNU4-49P-201ENST00000516080 AK5Q9Y6K8 562 aa5.54□□□□□ -1.52
RNU4-49P-201ENST00000516080 PRAMEF27A3QJZ7 478 aa5.53□□□□□ -1.52
RNU4-49P-201ENST00000516080 RNASE1P07998 156 aaKnown RBP5.53□□□□□ -1.52
RNU4-49P-201ENST00000516080 LMNB1P20700 586 aa5.53□□□□□ -1.52
RNU4-49P-201ENST00000516080 CAP2P40123 477 aa5.53□□□□□ -1.52
RNU4-49P-201ENST00000516080 CD96P40200 585 aa5.53□□□□□ -1.52
RNU4-49P-201ENST00000516080 CLCN7P51798 805 aa5.53□□□□□ -1.52
RNU4-49P-201ENST00000516080 PTPN11Q06124 597 aaPredicted RBP5.53□□□□□ -1.52
RNU4-49P-201ENST00000516080 INPP5AQ14642 412 aa5.53□□□□□ -1.52
RNU4-49P-201ENST00000516080 CCDC85BQ15834 202 aaPredicted RBP5.53□□□□□ -1.52
RNU4-49P-201ENST00000516080 SLC23A3Q6PIS1 610 aa5.53□□□□□ -1.52
RNU4-49P-201ENST00000516080 PLPPR2Q96GM1 343 aa5.53□□□□□ -1.52
RNU4-49P-201ENST00000516080 FOXQ1Q9C009 403 aa5.53□□□□□ -1.52
RNU4-49P-201ENST00000516080 WNT10AQ9GZT5 417 aa5.53□□□□□ -1.52
RNU4-49P-201ENST00000516080 MAPK8IP1Q9UQF2 711 aa5.53□□□□□ -1.52
RNU4-49P-201ENST00000516080 EOMESO95936 686 aa5.52□□□□□ -1.53
RNU4-49P-201ENST00000516080 ETF1P62495 437 aaKnown RBP5.52□□□□□ -1.53
RNU4-49P-201ENST00000516080 HID1Q8IV36 788 aa5.52□□□□□ -1.53
RNU4-49P-201ENST00000516080 SPACA3Q8IXA5 215 aa5.52□□□□□ -1.53
RNU4-49P-201ENST00000516080 GAL3ST3Q96A11 431 aa5.52□□□□□ -1.53
RNU4-49P-201ENST00000516080 ADAMTS6Q9UKP5 1117 aa5.52□□□□□ -1.53
RNU4-49P-201ENST00000516080 TACC3Q9Y6A5 838 aa5.52□□□□□ -1.53
RNU4-49P-201ENST00000516080 ANKRD33BA6NCL7 494 aa5.51□□□□□ -1.53
RNU4-49P-201ENST00000516080 IKZF1Q13422 519 aa5.51□□□□□ -1.53
RNU4-49P-201ENST00000516080 SLBPQ14493 270 aaKnown RBP eCLIP5.51□□□□□ -1.53
RNU4-49P-201ENST00000516080 NKPD1Q17RQ9 610 aa5.51□□□□□ -1.53
RNU4-49P-201ENST00000516080 EAPPQ56P03 285 aaPredicted RBP5.51□□□□□ -1.53
RNU4-49P-201ENST00000516080 WIPI1Q5MNZ9 446 aaPredicted RBP5.51□□□□□ -1.53
RNU4-49P-201ENST00000516080 ZNF746Q6NUN9 644 aaPredicted RBP5.51□□□□□ -1.53
RNU4-49P-201ENST00000516080 SND1Q7KZF4 910 aaKnown RBP eCLIP5.51□□□□□ -1.53
RNU4-49P-201ENST00000516080 MFSD2AQ8NA29 543 aa5.51□□□□□ -1.53
RNU4-49P-201ENST00000516080 LRRN4CLQ8ND94 238 aa5.51□□□□□ -1.53
RNU4-49P-201ENST00000516080 DUSP9Q99956 384 aaKnown RBP5.51□□□□□ -1.53
RNU4-49P-201ENST00000516080 FAM155AB1AL88 458 aaPredicted RBP5.5□□□□□ -1.53
RNU4-49P-201ENST00000516080 SLITRK5O94991 958 aa5.5□□□□□ -1.53
RNU4-49P-201ENST00000516080 RLBP1P12271 317 aa5.5□□□□□ -1.53
RNU4-49P-201ENST00000516080 ZP2Q05996 745 aa5.5□□□□□ -1.53
RNU4-49P-201ENST00000516080 DIEXFQ68CQ4 756 aaKnown RBP5.5□□□□□ -1.53
RNU4-49P-201ENST00000516080 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.5□□□□□ -1.53
RNU4-49P-201ENST00000516080 AGMOQ6ZNB7 445 aa5.5□□□□□ -1.53
RNU4-49P-201ENST00000516080 C22orf34Q6ZV56 151 aa5.5□□□□□ -1.53
RNU4-49P-201ENST00000516080 FBRSQ9HAH7 460 aa5.5□□□□□ -1.53
RNU4-49P-201ENST00000516080 LMCD1Q9NZU5 365 aa5.5□□□□□ -1.53
RNU4-49P-201ENST00000516080 TPX2Q9ULW0 747 aaKnown RBP5.5□□□□□ -1.53
RNU4-49P-201ENST00000516080 PITPNM2Q9BZ72 1349 aa5.49□□□□□ -1.53
RNU4-49P-201ENST00000516080 SFRP5Q5T4F7 317 aa5.49□□□□□ -1.53
RNU4-49P-201ENST00000516080 FLAD1Q8NFF5 587 aa5.49□□□□□ -1.53
RNU4-49P-201ENST00000516080 TMEM40Q8WWA1 233 aa5.49□□□□□ -1.53
RNU4-49P-201ENST00000516080 FAM168AQ92567 244 aa5.49□□□□□ -1.53
RNU4-49P-201ENST00000516080 COX4I2Q96KJ9 171 aa5.49□□□□□ -1.53
RNU4-49P-201ENST00000516080 MIPEPQ99797 713 aa5.49□□□□□ -1.53
RNU4-49P-201ENST00000516080 CARMIL2Q6F5E8 1435 aa5.48□□□□□ -1.53
RNU4-49P-201ENST00000516080 GFRA2O00451 464 aa5.48□□□□□ -1.53
RNU4-49P-201ENST00000516080 CST3P01034 146 aaPredicted RBP5.48□□□□□ -1.53
RNU4-49P-201ENST00000516080 ZNF865P0CJ78 1059 aaPredicted RBP5.48□□□□□ -1.53
RNU4-49P-201ENST00000516080 CYP7A1P22680 504 aa5.48□□□□□ -1.53
RNU4-49P-201ENST00000516080 GRK4P32298 578 aa5.48□□□□□ -1.53
RNU4-49P-201ENST00000516080 LIG3P49916 1009 aa5.48□□□□□ -1.53
RNU4-49P-201ENST00000516080 SEPT6Q14141 434 aa5.48□□□□□ -1.53
RNU4-49P-201ENST00000516080 NKG7Q16617 165 aa5.48□□□□□ -1.53
RNU4-49P-201ENST00000516080 LETMD1Q6P1Q0 360 aa5.48□□□□□ -1.53
RNU4-49P-201ENST00000516080 MFSD4AQ8N468 514 aa5.48□□□□□ -1.53
RNU4-49P-201ENST00000516080 MIR1-1HGQ9H1L0 117 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms