RNA–Protein interactions for RNA: ENST00000515355.5

SUB1-213, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SUB1, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-213ENST00000515355 SNCAIPQ9Y6H5 919 aa13.9□□□□□ -0.18
SUB1-213ENST00000515355 RFX7Q2KHR2 1363 aa13.9□□□□□ -0.18
SUB1-213ENST00000515355 TRIM6-TRIM34B2RNG4 842 aa13.89□□□□□ -0.19
SUB1-213ENST00000515355 CA12O43570 354 aa13.89□□□□□ -0.19
SUB1-213ENST00000515355 PRKAB2O43741 272 aa13.89□□□□□ -0.19
SUB1-213ENST00000515355 TBC1D8O95759 1140 aa13.89□□□□□ -0.19
SUB1-213ENST00000515355 PDE1AP54750 535 aa13.89□□□□□ -0.19
SUB1-213ENST00000515355 COL13A1Q5TAT6 717 aaPredicted RBP13.89□□□□□ -0.19
SUB1-213ENST00000515355 TMED8Q6PL24 325 aaPredicted RBP13.89□□□□□ -0.19
SUB1-213ENST00000515355 ERO1BQ86YB8 467 aa13.89□□□□□ -0.19
SUB1-213ENST00000515355 RIOK1Q9BRS2 568 aaKnown RBP13.89□□□□□ -0.19
SUB1-213ENST00000515355 MYO5AQ9Y4I1 1855 aaKnown RBP13.89□□□□□ -0.19
SUB1-213ENST00000515355 CCL15-CCL14A0A0B4J2E2 113 aa13.88□□□□□ -0.19
SUB1-213ENST00000515355 SPDYE5A6NIY4 337 aa13.88□□□□□ -0.19
SUB1-213ENST00000515355 IRF6O14896 467 aa13.88□□□□□ -0.19
SUB1-213ENST00000515355 RNF113AO15541 343 aaKnown RBP13.88□□□□□ -0.19
SUB1-213ENST00000515355 NUCB1Q02818 461 aa13.88□□□□□ -0.19
SUB1-213ENST00000515355 UBE3CQ15386 1083 aa13.88□□□□□ -0.19
SUB1-213ENST00000515355 CCL15Q16663 113 aa13.88□□□□□ -0.19
SUB1-213ENST00000515355 CCDC84Q86UT8 332 aaPredicted RBP13.88□□□□□ -0.19
SUB1-213ENST00000515355 RILPL2Q969X0 211 aa13.88□□□□□ -0.19
SUB1-213ENST00000515355 PUS7LQ9H0K6 701 aaKnown RBP13.88□□□□□ -0.19
SUB1-213ENST00000515355 MCM9Q9NXL9 1143 aa13.88□□□□□ -0.19
SUB1-213ENST00000515355 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.88□□□□□ -0.19
SUB1-213ENST00000515355 ZNF112Q9UJU3 913 aa13.88□□□□□ -0.19
SUB1-213ENST00000515355 SLC4A4Q9Y6R1 1079 aa13.88□□□□□ -0.19
SUB1-213ENST00000515355 ZHX2Q9Y6X8 837 aa13.88□□□□□ -0.19
SUB1-213ENST00000515355 PHF20L1A8MW92 1017 aa13.87□□□□□ -0.19
SUB1-213ENST00000515355 PITPNM1O00562 1244 aa13.87□□□□□ -0.19
SUB1-213ENST00000515355 CTNND1O60716 968 aaKnown RBP13.87□□□□□ -0.19
SUB1-213ENST00000515355 GDF11O95390 407 aa13.87□□□□□ -0.19
SUB1-213ENST00000515355 APPP05067 770 aa13.87□□□□□ -0.19
SUB1-213ENST00000515355 TM4SF4P48230 202 aa13.87□□□□□ -0.19
SUB1-213ENST00000515355 GTF2A2P52657 109 aa13.87□□□□□ -0.19
SUB1-213ENST00000515355 INHBEP58166 350 aa13.87□□□□□ -0.19
SUB1-213ENST00000515355 LRRFIP1Q32MZ4 808 aaKnown RBP13.87□□□□□ -0.19
SUB1-213ENST00000515355 OTUD7BQ6GQQ9 843 aa13.87□□□□□ -0.19
SUB1-213ENST00000515355 TTC6Q86TZ1 520 aa13.87□□□□□ -0.19
SUB1-213ENST00000515355 IFNL1Q8IU54 200 aa13.87□□□□□ -0.19
SUB1-213ENST00000515355 SCYL3Q8IZE3 742 aa13.87□□□□□ -0.19
SUB1-213ENST00000515355 DDRGK1Q96HY6 314 aa13.87□□□□□ -0.19
SUB1-213ENST00000515355 ATRNL1Q5VV63 1379 aa13.86□□□□□ -0.19
SUB1-213ENST00000515355 TBC1D12O60347 775 aa13.86□□□□□ -0.19
SUB1-213ENST00000515355 PPATQ06203 517 aa13.86□□□□□ -0.19
SUB1-213ENST00000515355 SNAPC2Q13487 334 aa13.86□□□□□ -0.19
SUB1-213ENST00000515355 FOXP4Q8IVH2 680 aaPredicted RBP13.86□□□□□ -0.19
SUB1-213ENST00000515355 HERC5Q9UII4 1024 aaKnown RBP13.86□□□□□ -0.19
SUB1-213ENST00000515355 MAST2Q6P0Q8 1798 aa13.86□□□□□ -0.19
SUB1-213ENST00000515355 TRIM75PA6NK02 468 aa13.85□□□□□ -0.19
SUB1-213ENST00000515355 IGF2BP3O00425 579 aaKnown RBP eCLIP13.85□□□□□ -0.19
SUB1-213ENST00000515355 NEFLP07196 543 aa13.85□□□□□ -0.19
SUB1-213ENST00000515355 ZFYP08048 801 aaPredicted RBP13.85□□□□□ -0.19
SUB1-213ENST00000515355 CYP2D6P10635 497 aa13.85□□□□□ -0.19
SUB1-213ENST00000515355 CETPP11597 493 aa13.85□□□□□ -0.19
SUB1-213ENST00000515355 PTPRAP18433 802 aa13.85□□□□□ -0.19
SUB1-213ENST00000515355 PLCD1P51178 756 aa13.85□□□□□ -0.19
SUB1-213ENST00000515355 MAP3K10Q02779 954 aa13.85□□□□□ -0.19
SUB1-213ENST00000515355 PPIL2Q13356 520 aa13.85□□□□□ -0.19
SUB1-213ENST00000515355 NOL9Q5SY16 702 aaKnown RBP13.85□□□□□ -0.19
SUB1-213ENST00000515355 AMOTL1Q8IY63 956 aa13.85□□□□□ -0.19
SUB1-213ENST00000515355 STK11IPQ8N1F8 1099 aa13.85□□□□□ -0.19
SUB1-213ENST00000515355 BRI3BPQ8WY22 251 aa13.85□□□□□ -0.19
SUB1-213ENST00000515355 APPBP2Q92624 585 aa13.85□□□□□ -0.19
SUB1-213ENST00000515355 OSBP2Q969R2 916 aa13.85□□□□□ -0.19
SUB1-213ENST00000515355 EVI5LQ96CN4 794 aa13.85□□□□□ -0.19
SUB1-213ENST00000515355 SEC62Q99442 399 aaKnown RBP13.85□□□□□ -0.19
SUB1-213ENST00000515355 DCP1AQ9NPI6 582 aaPredicted RBP13.85□□□□□ -0.19
SUB1-213ENST00000515355 SAGE1Q9NXZ1 904 aa13.85□□□□□ -0.19
SUB1-213ENST00000515355 STAP2Q9UGK3 403 aa13.85□□□□□ -0.19
SUB1-213ENST00000515355 SALL3Q9BXA9 1300 aa13.85□□□□□ -0.19
SUB1-213ENST00000515355 M0R2C6 588 aa13.84□□□□□ -0.19
SUB1-213ENST00000515355 ALDH1A1P00352 501 aa13.84□□□□□ -0.19
SUB1-213ENST00000515355 RRP1BQ14684 758 aaKnown RBP13.84□□□□□ -0.19
SUB1-213ENST00000515355 GADL1Q6ZQY3 521 aa13.84□□□□□ -0.19
SUB1-213ENST00000515355 PLEKHM2Q8IWE5 1019 aa13.84□□□□□ -0.19
SUB1-213ENST00000515355 MS4A4AQ96JQ5 239 aa13.84□□□□□ -0.19
SUB1-213ENST00000515355 PTPN18Q99952 460 aa13.84□□□□□ -0.19
SUB1-213ENST00000515355 PRDM10Q9NQV6 1147 aa13.84□□□□□ -0.19
SUB1-213ENST00000515355 SERPINB13Q9UIV8 391 aa13.84□□□□□ -0.19
SUB1-213ENST00000515355 CYP2D7A0A087X1C5 515 aa13.83□□□□□ -0.2
SUB1-213ENST00000515355 MPHOSPH10O00566 681 aaKnown RBP13.83□□□□□ -0.2
SUB1-213ENST00000515355 GPAA1O43292 621 aa13.83□□□□□ -0.2
SUB1-213ENST00000515355 CENPBP07199 599 aaPredicted RBP13.83□□□□□ -0.2
SUB1-213ENST00000515355 CAP2P40123 477 aa13.83□□□□□ -0.2
SUB1-213ENST00000515355 FXR2P51116 673 aaKnown RBP eCLIP13.83□□□□□ -0.2
SUB1-213ENST00000515355 EVX2Q03828 476 aa13.83□□□□□ -0.2
SUB1-213ENST00000515355 SHROOM1Q2M3G4 852 aaPredicted RBP13.83□□□□□ -0.2
SUB1-213ENST00000515355 CERKLQ49MI3 558 aaPredicted RBP13.83□□□□□ -0.2
SUB1-213ENST00000515355 TNS4Q8IZW8 715 aa13.83□□□□□ -0.2
SUB1-213ENST00000515355 SP7Q8TDD2 431 aaPredicted RBP13.83□□□□□ -0.2
SUB1-213ENST00000515355 STRBPQ96SI9 672 aaKnown RBP13.83□□□□□ -0.2
SUB1-213ENST00000515355 R3HDMLQ9H3Y0 253 aa13.83□□□□□ -0.2
SUB1-213ENST00000515355 DNAJC18Q9H819 358 aa13.83□□□□□ -0.2
SUB1-213ENST00000515355 ATP8A2Q9NTI2 1148 aa13.83□□□□□ -0.2
SUB1-213ENST00000515355 MINDY4BA8MYZ0 360 aa13.82□□□□□ -0.2
SUB1-213ENST00000515355 BTBD19C9JJ37 291 aa13.82□□□□□ -0.2
SUB1-213ENST00000515355 USP17L12C9JPN9 530 aa13.82□□□□□ -0.2
SUB1-213ENST00000515355 USP17L21D6R901 530 aa13.82□□□□□ -0.2
SUB1-213ENST00000515355 ECM2O94769 699 aaPredicted RBP13.82□□□□□ -0.2
SUB1-213ENST00000515355 TDO2P48775 406 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms