RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 EXOC6BQ9Y2D4 811 aa16.32■□□□□ 0.2
PFDN1-206ENST00000514611 NDUFB9Q9Y6M9 179 aa16.32■□□□□ 0.2
PFDN1-206ENST00000514611 FLT1P17948 1338 aa16.31■□□□□ 0.2
PFDN1-206ENST00000514611 GNRH1P01148 92 aa16.31■□□□□ 0.2
PFDN1-206ENST00000514611 FASTKD5Q7L8L6 764 aaKnown RBP16.31■□□□□ 0.2
PFDN1-206ENST00000514611 NBPF11Q86T75 865 aa16.31■□□□□ 0.2
PFDN1-206ENST00000514611 TGFBRAP1Q8WUH2 860 aa16.31■□□□□ 0.2
PFDN1-206ENST00000514611 ZNF512BQ96KM6 892 aaPredicted RBP16.31■□□□□ 0.2
PFDN1-206ENST00000514611 SRRDQ9UH36 339 aa16.31■□□□□ 0.2
PFDN1-206ENST00000514611 SIPA1L1O43166 1804 aa16.31■□□□□ 0.2
PFDN1-206ENST00000514611 MYPNQ86TC9 1320 aa16.3■□□□□ 0.2
PFDN1-206ENST00000514611 FMNL1O95466 1100 aaPredicted RBP16.3■□□□□ 0.2
PFDN1-206ENST00000514611 BAG3O95817 575 aa16.3■□□□□ 0.2
PFDN1-206ENST00000514611 SLC4A8Q2Y0W8 1093 aa16.3■□□□□ 0.2
PFDN1-206ENST00000514611 TREML2Q5T2D2 321 aa16.3■□□□□ 0.2
PFDN1-206ENST00000514611 MAPKAPK5Q8IW41 473 aa16.3■□□□□ 0.2
PFDN1-206ENST00000514611 TMEM106CQ9BVX2 250 aa16.3■□□□□ 0.2
PFDN1-206ENST00000514611 PTPRFP10586 1907 aa16.29■□□□□ 0.2
PFDN1-206ENST00000514611 PRMT2P55345 433 aa16.29■□□□□ 0.2
PFDN1-206ENST00000514611 PPP4CP60510 307 aa16.29■□□□□ 0.2
PFDN1-206ENST00000514611 DYNLL1P63167 89 aaKnown RBP16.29■□□□□ 0.2
PFDN1-206ENST00000514611 PRKCZQ05513 592 aa16.29■□□□□ 0.2
PFDN1-206ENST00000514611 DNAJC18Q9H819 358 aa16.29■□□□□ 0.2
PFDN1-206ENST00000514611 AGTPBP1Q9UPW5 1226 aa16.29■□□□□ 0.2
PFDN1-206ENST00000514611 SLC45A1Q9Y2W3 748 aa16.29■□□□□ 0.2
PFDN1-206ENST00000514611 IDH1O75874 414 aaKnown RBP16.28■□□□□ 0.2
PFDN1-206ENST00000514611 PLCG2P16885 1265 aa16.28■□□□□ 0.2
PFDN1-206ENST00000514611 CAP2P40123 477 aa16.28■□□□□ 0.2
PFDN1-206ENST00000514611 SPP2Q13103 211 aa16.28■□□□□ 0.2
PFDN1-206ENST00000514611 MTFR1Q15390 333 aa16.28■□□□□ 0.2
PFDN1-206ENST00000514611 SHROOM1Q2M3G4 852 aaPredicted RBP16.28■□□□□ 0.2
PFDN1-206ENST00000514611 AACSQ86V21 672 aa16.28■□□□□ 0.2
PFDN1-206ENST00000514611 RAET1EQ8TD07 263 aa16.28■□□□□ 0.2
PFDN1-206ENST00000514611 SMCR8Q8TEV9 937 aaPredicted RBP16.28■□□□□ 0.2
PFDN1-206ENST00000514611 ANTXR1Q9H6X2 564 aa16.28■□□□□ 0.2
PFDN1-206ENST00000514611 IL1RAPL2Q9NP60 686 aa16.28■□□□□ 0.2
PFDN1-206ENST00000514611 PI4KBQ9UBF8 816 aa16.28■□□□□ 0.2
PFDN1-206ENST00000514611 HERC5Q9UII4 1024 aaKnown RBP16.28■□□□□ 0.2
PFDN1-206ENST00000514611 PDE4DIPQ5VU43 2346 aa16.28■□□□□ 0.2
PFDN1-206ENST00000514611 MYO5AQ9Y4I1 1855 aaKnown RBP16.27■□□□□ 0.2
PFDN1-206ENST00000514611 ATAD5Q96QE3 1844 aa16.27■□□□□ 0.2
PFDN1-206ENST00000514611 CYP7A1P22680 504 aa16.27■□□□□ 0.2
PFDN1-206ENST00000514611 FCGRTP55899 365 aa16.27■□□□□ 0.2
PFDN1-206ENST00000514611 MIGA1Q8NAN2 632 aa16.27■□□□□ 0.2
PFDN1-206ENST00000514611 ZNF280CQ8ND82 737 aa16.27■□□□□ 0.2
PFDN1-206ENST00000514611 SAP30BPQ9UHR5 308 aaKnown RBP16.27■□□□□ 0.2
PFDN1-206ENST00000514611 PALD1Q9ULE6 856 aa16.27■□□□□ 0.2
PFDN1-206ENST00000514611 GABRQQ9UN88 632 aa16.27■□□□□ 0.2
PFDN1-206ENST00000514611 COG6Q9Y2V7 657 aa16.27■□□□□ 0.2
PFDN1-206ENST00000514611 LOC285556D6RIA3 1793 aa16.26■□□□□ 0.19
PFDN1-206ENST00000514611 HOXD10P28358 340 aa16.26■□□□□ 0.19
PFDN1-206ENST00000514611 HMGCS2P54868 508 aa16.26■□□□□ 0.19
PFDN1-206ENST00000514611 JAG1P78504 1218 aa16.26■□□□□ 0.19
PFDN1-206ENST00000514611 ERC1Q8IUD2 1116 aa16.26■□□□□ 0.19
PFDN1-206ENST00000514611 MAGEB6Q8N7X4 407 aa16.26■□□□□ 0.19
PFDN1-206ENST00000514611 DHX36Q9H2U1 1008 aaKnown RBP16.26■□□□□ 0.19
PFDN1-206ENST00000514611 CDK5RAP2Q96SN8 1893 aa16.25■□□□□ 0.19
PFDN1-206ENST00000514611 FOCADQ5VW36 1801 aa16.25■□□□□ 0.19
PFDN1-206ENST00000514611 USP17L5A8MUK1 530 aa16.25■□□□□ 0.19
PFDN1-206ENST00000514611 APBB1O00213 710 aa16.25■□□□□ 0.19
PFDN1-206ENST00000514611 GDF11O95390 407 aa16.25■□□□□ 0.19
PFDN1-206ENST00000514611 GRK4P32298 578 aa16.25■□□□□ 0.19
PFDN1-206ENST00000514611 ANKRD13CQ8N6S4 541 aa16.25■□□□□ 0.19
PFDN1-206ENST00000514611 PROCA1Q8NCQ7 364 aaPredicted RBP16.25■□□□□ 0.19
PFDN1-206ENST00000514611 RHPN1Q8TCX5 695 aa16.25■□□□□ 0.19
PFDN1-206ENST00000514611 SHISA4Q96DD7 197 aa16.25■□□□□ 0.19
PFDN1-206ENST00000514611 MTMR2Q13614 643 aa16.24■□□□□ 0.19
PFDN1-206ENST00000514611 METTL16Q86W50 562 aaKnown RBP16.24■□□□□ 0.19
PFDN1-206ENST00000514611 CRACR2BQ8N4Y2 399 aaPredicted RBP16.24■□□□□ 0.19
PFDN1-206ENST00000514611 TBC1D2Q9BYX2 928 aa16.24■□□□□ 0.19
PFDN1-206ENST00000514611 AS3MTQ9HBK9 375 aa16.24■□□□□ 0.19
PFDN1-206ENST00000514611 PNMA3Q9UL41 463 aa16.24■□□□□ 0.19
PFDN1-206ENST00000514611 TNPO2O14787 897 aaKnown RBP16.23■□□□□ 0.19
PFDN1-206ENST00000514611 IGSF3O75054 1194 aa16.23■□□□□ 0.19
PFDN1-206ENST00000514611 MS4A1P11836 297 aa16.23■□□□□ 0.19
PFDN1-206ENST00000514611 FLT3LGP49771 235 aa16.23■□□□□ 0.19
PFDN1-206ENST00000514611 SIRT2Q8IXJ6 389 aa16.23■□□□□ 0.19
PFDN1-206ENST00000514611 TRIM34Q9BYJ4 488 aa16.23■□□□□ 0.19
PFDN1-206ENST00000514611 BCL11AQ9H165 835 aa16.23■□□□□ 0.19
PFDN1-206ENST00000514611 ZBTB40Q9NUA8 1239 aa16.23■□□□□ 0.19
PFDN1-206ENST00000514611 KIAA0100Q14667 2235 aaKnown RBP16.22■□□□□ 0.19
PFDN1-206ENST00000514611 HLA-DOAP06340 250 aa16.22■□□□□ 0.19
PFDN1-206ENST00000514611 ASNSP08243 561 aa16.22■□□□□ 0.19
PFDN1-206ENST00000514611 USP5P45974 858 aa16.22■□□□□ 0.19
PFDN1-206ENST00000514611 MAP3K12Q12852 859 aa16.22■□□□□ 0.19
PFDN1-206ENST00000514611 FAM110CQ1W6H9 321 aa16.22■□□□□ 0.19
PFDN1-206ENST00000514611 HSP90AB4PQ58FF6 505 aa16.22■□□□□ 0.19
PFDN1-206ENST00000514611 SH3D19Q5HYK7 790 aa16.22■□□□□ 0.19
PFDN1-206ENST00000514611 SLAIN1Q8ND83 568 aa16.22■□□□□ 0.19
PFDN1-206ENST00000514611 ZBTB21Q9ULJ3 1066 aa16.22■□□□□ 0.19
PFDN1-206ENST00000514611 DDX19BQ9UMR2 479 aa16.22■□□□□ 0.19
PFDN1-206ENST00000514611 MGAMO43451 1857 aa16.22■□□□□ 0.19
PFDN1-206ENST00000514611 CCL5P13501 91 aa16.21■□□□□ 0.19
PFDN1-206ENST00000514611 ELNP15502 786 aa16.21■□□□□ 0.19
PFDN1-206ENST00000514611 BACE1P56817 501 aa16.21■□□□□ 0.19
PFDN1-206ENST00000514611 FOXP4Q8IVH2 680 aaPredicted RBP16.21■□□□□ 0.19
PFDN1-206ENST00000514611 KIF1BPQ96EK5 621 aa16.21■□□□□ 0.19
PFDN1-206ENST00000514611 WDR18Q9BV38 432 aa16.21■□□□□ 0.19
PFDN1-206ENST00000514611 ASCC2Q9H1I8 757 aaPredicted RBP16.21■□□□□ 0.19
PFDN1-206ENST00000514611 BIN2Q9UBW5 565 aaPredicted RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms