RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 POU5F1BQ06416 359 aa8.26□□□□□ -1.09
NIPBL-208ENST00000514335 FAM114A1Q8IWE2 563 aa8.26□□□□□ -1.09
NIPBL-208ENST00000514335 AFAP1Q8N556 730 aa8.26□□□□□ -1.09
NIPBL-208ENST00000514335 GIMAP7Q8NHV1 300 aa8.26□□□□□ -1.09
NIPBL-208ENST00000514335 LRRCC1Q9C099 1032 aa8.26□□□□□ -1.09
NIPBL-208ENST00000514335 KIF9Q9HAQ2 790 aa8.26□□□□□ -1.09
NIPBL-208ENST00000514335 LRP6O75581 1613 aa8.26□□□□□ -1.09
NIPBL-208ENST00000514335 STXBP3O00186 592 aa8.26□□□□□ -1.09
NIPBL-208ENST00000514335 PDE4DQ08499 809 aa8.26□□□□□ -1.09
NIPBL-208ENST00000514335 PTPN14Q15678 1187 aa8.26□□□□□ -1.09
NIPBL-208ENST00000514335 KRT222Q8N1A0 295 aa8.26□□□□□ -1.09
NIPBL-208ENST00000514335 B4GALNT2Q8NHY0 566 aa8.26□□□□□ -1.09
NIPBL-208ENST00000514335 KIF18AQ8NI77 898 aa8.26□□□□□ -1.09
NIPBL-208ENST00000514335 SUN5Q8TC36 379 aa8.26□□□□□ -1.09
NIPBL-208ENST00000514335 SPIRE2Q8WWL2 714 aa8.26□□□□□ -1.09
NIPBL-208ENST00000514335 CEP295NLQ96MC4 621 aa8.26□□□□□ -1.09
NIPBL-208ENST00000514335 TACO1Q9BSH4 297 aaKnown RBP8.26□□□□□ -1.09
NIPBL-208ENST00000514335 MAK16Q9BXY0 300 aaKnown RBP8.26□□□□□ -1.09
NIPBL-208ENST00000514335 BRD8Q9H0E9 1235 aa8.26□□□□□ -1.09
NIPBL-208ENST00000514335 ADGRL3Q9HAR2 1447 aa8.25□□□□□ -1.09
NIPBL-208ENST00000514335 E9PCH4 1651 aa8.25□□□□□ -1.09
NIPBL-208ENST00000514335 A0A1W2PRQ8 180 aa8.25□□□□□ -1.09
NIPBL-208ENST00000514335 NPHP1O15259 732 aa8.25□□□□□ -1.09
NIPBL-208ENST00000514335 NDUFB5O43674 189 aa8.25□□□□□ -1.09
NIPBL-208ENST00000514335 BAG4O95429 457 aaKnown RBP8.25□□□□□ -1.09
NIPBL-208ENST00000514335 ELF1P32519 619 aa8.25□□□□□ -1.09
NIPBL-208ENST00000514335 SNX16P57768 344 aa8.25□□□□□ -1.09
NIPBL-208ENST00000514335 CTAG1AP78358 180 aa8.25□□□□□ -1.09
NIPBL-208ENST00000514335 LAMB3Q13751 1172 aa8.25□□□□□ -1.09
NIPBL-208ENST00000514335 KIAA0753Q2KHM9 967 aa8.25□□□□□ -1.09
NIPBL-208ENST00000514335 HS1BP3Q53T59 392 aa8.25□□□□□ -1.09
NIPBL-208ENST00000514335 ZNF75CPQ92670 426 aaPredicted RBP8.25□□□□□ -1.09
NIPBL-208ENST00000514335 CORO1BQ9BR76 489 aa8.25□□□□□ -1.09
NIPBL-208ENST00000514335 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.25□□□□□ -1.09
NIPBL-208ENST00000514335 RRBP1Q9P2E9 1410 aaKnown RBP8.25□□□□□ -1.09
NIPBL-208ENST00000514335 THSD7AQ9UPZ6 1657 aa8.25□□□□□ -1.09
NIPBL-208ENST00000514335 DLC1Q96QB1 1528 aa8.25□□□□□ -1.09
NIPBL-208ENST00000514335 TMEM238LA0A1B0GVL6 79 aa8.25□□□□□ -1.09
NIPBL-208ENST00000514335 TBKBP1A7MCY6 615 aa8.25□□□□□ -1.09
NIPBL-208ENST00000514335 GCFC2P16383 781 aaKnown RBP8.25□□□□□ -1.09
NIPBL-208ENST00000514335 CDCA2Q69YH5 1023 aaPredicted RBP8.25□□□□□ -1.09
NIPBL-208ENST00000514335 C16orf54Q6UWD8 224 aa8.25□□□□□ -1.09
NIPBL-208ENST00000514335 CCDC191Q8NCU4 936 aa8.25□□□□□ -1.09
NIPBL-208ENST00000514335 GOLGA5Q8TBA6 731 aa8.25□□□□□ -1.09
NIPBL-208ENST00000514335 STON2Q8WXE9 905 aa8.25□□□□□ -1.09
NIPBL-208ENST00000514335 N4BP2L2Q92802 583 aaPredicted RBP8.25□□□□□ -1.09
NIPBL-208ENST00000514335 ZNF496Q96IT1 587 aaPredicted RBP8.25□□□□□ -1.09
NIPBL-208ENST00000514335 DNAI2Q9GZS0 605 aa8.25□□□□□ -1.09
NIPBL-208ENST00000514335 EPB41L4AQ9HCS5 686 aaPredicted RBP8.25□□□□□ -1.09
NIPBL-208ENST00000514335 TRPC6Q9Y210 931 aa8.25□□□□□ -1.09
NIPBL-208ENST00000514335 ATP6V0A2Q9Y487 856 aa8.25□□□□□ -1.09
NIPBL-208ENST00000514335 TRPM1Q7Z4N2 1603 aa8.25□□□□□ -1.09
NIPBL-208ENST00000514335 H7C1W4 665 aa8.24□□□□□ -1.09
NIPBL-208ENST00000514335 VAMP4O75379 141 aa8.24□□□□□ -1.09
NIPBL-208ENST00000514335 RPN1P04843 607 aaKnown RBP8.24□□□□□ -1.09
NIPBL-208ENST00000514335 NASPP49321 788 aaPredicted RBP8.24□□□□□ -1.09
NIPBL-208ENST00000514335 PDXDC2PQ6P474 469 aa8.24□□□□□ -1.09
NIPBL-208ENST00000514335 C7orf57Q8NEG2 295 aa8.24□□□□□ -1.09
NIPBL-208ENST00000514335 BICD2Q8TD16 824 aa8.24□□□□□ -1.09
NIPBL-208ENST00000514335 NLRP7Q8WX94 980 aa8.24□□□□□ -1.09
NIPBL-208ENST00000514335 TANGO6Q9C0B7 1094 aa8.24□□□□□ -1.09
NIPBL-208ENST00000514335 QPCTLQ9NXS2 382 aa8.24□□□□□ -1.09
NIPBL-208ENST00000514335 SLC30A1Q9Y6M5 507 aa8.24□□□□□ -1.09
NIPBL-208ENST00000514335 FMN2Q9NZ56 1722 aa8.24□□□□□ -1.09
NIPBL-208ENST00000514335 MYOM2P54296 1465 aa8.24□□□□□ -1.09
NIPBL-208ENST00000514335 A6NCN8 305 aa8.24□□□□□ -1.09
NIPBL-208ENST00000514335 BTBD11A6QL63 1104 aa8.24□□□□□ -1.09
NIPBL-208ENST00000514335 RTN3O95197 1032 aaPredicted RBP8.24□□□□□ -1.09
NIPBL-208ENST00000514335 IBSPP21815 317 aaPredicted RBP8.24□□□□□ -1.09
NIPBL-208ENST00000514335 RFX1P22670 979 aa8.24□□□□□ -1.09
NIPBL-208ENST00000514335 PRKAR2BP31323 418 aa8.24□□□□□ -1.09
NIPBL-208ENST00000514335 USP11P51784 963 aa8.24□□□□□ -1.09
NIPBL-208ENST00000514335 NUCB2P80303 420 aa8.24□□□□□ -1.09
NIPBL-208ENST00000514335 PPP2R5CQ13362 524 aa8.24□□□□□ -1.09
NIPBL-208ENST00000514335 CLPPQ16740 277 aaPredicted RBP8.24□□□□□ -1.09
NIPBL-208ENST00000514335 LDLRAD1Q5T700 205 aa8.24□□□□□ -1.09
NIPBL-208ENST00000514335 KIAA1614Q5VZ46 1190 aa8.24□□□□□ -1.09
NIPBL-208ENST00000514335 LRRC31Q6UY01 552 aa8.24□□□□□ -1.09
NIPBL-208ENST00000514335 MILR1Q7Z6M3 343 aa8.24□□□□□ -1.09
NIPBL-208ENST00000514335 USP48Q86UV5 1035 aa8.24□□□□□ -1.09
NIPBL-208ENST00000514335 DNAJC25Q9H1X3 360 aa8.24□□□□□ -1.09
NIPBL-208ENST00000514335 RGS17Q9UGC6 210 aaPredicted RBP8.24□□□□□ -1.09
NIPBL-208ENST00000514335 PPP1R9AQ9ULJ8 1098 aa8.24□□□□□ -1.09
NIPBL-208ENST00000514335 C2CD2Q9Y426 696 aa8.24□□□□□ -1.09
NIPBL-208ENST00000514335 LILRB3O75022 631 aa8.23□□□□□ -1.09
NIPBL-208ENST00000514335 MNAT1P51948 309 aa8.23□□□□□ -1.09
NIPBL-208ENST00000514335 LBRQ14739 615 aaKnown RBP8.23□□□□□ -1.09
NIPBL-208ENST00000514335 SDCCAG8Q86SQ7 713 aaPredicted RBP8.23□□□□□ -1.09
NIPBL-208ENST00000514335 NPAS4Q8IUM7 802 aa8.23□□□□□ -1.09
NIPBL-208ENST00000514335 USP6NLQ92738 828 aa8.23□□□□□ -1.09
NIPBL-208ENST00000514335 RPGRQ92834 1020 aaKnown RBP8.23□□□□□ -1.09
NIPBL-208ENST00000514335 PAWRQ96IZ0 340 aaKnown RBP8.23□□□□□ -1.09
NIPBL-208ENST00000514335 USTQ9Y2C2 406 aa8.23□□□□□ -1.09
NIPBL-208ENST00000514335 LRRFIP2Q9Y608 721 aaKnown RBP8.23□□□□□ -1.09
NIPBL-208ENST00000514335 HFM1A2PYH4 1435 aa8.23□□□□□ -1.09
NIPBL-208ENST00000514335 ADAMTS13Q76LX8 1427 aa8.23□□□□□ -1.09
NIPBL-208ENST00000514335 RTN2O75298 545 aa8.23□□□□□ -1.09
NIPBL-208ENST00000514335 GCKP35557 465 aa8.23□□□□□ -1.09
NIPBL-208ENST00000514335 CCDC158Q5M9N0 1113 aa8.23□□□□□ -1.09
NIPBL-208ENST00000514335 ODR4Q5SWX8 454 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms