RNA–Protein interactions for RNA: ENST00000513240.5

DDR1-271, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 2,882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-271ENST00000513240 LAMA4Q16363 1823 aa16.87■□□□□ 0.29
DDR1-271ENST00000513240 LOC102724428A0A0B4J2F2 783 aa16.87■□□□□ 0.29
DDR1-271ENST00000513240 SIK1P57059 783 aa16.87■□□□□ 0.29
DDR1-271ENST00000513240 ZNF34Q8IZ26 560 aa16.87■□□□□ 0.29
DDR1-271ENST00000513240 FAM177A1Q8N128 213 aaPredicted RBP16.87■□□□□ 0.29
DDR1-271ENST00000513240 SYKP43405 635 aa16.86■□□□□ 0.29
DDR1-271ENST00000513240 BMS1Q14692 1282 aaKnown RBP16.86■□□□□ 0.29
DDR1-271ENST00000513240 FHOD1Q9Y613 1164 aa16.86■□□□□ 0.29
DDR1-271ENST00000513240 PATL2C9JE40 543 aaKnown RBP16.86■□□□□ 0.29
DDR1-271ENST00000513240 MMP14P50281 582 aa16.86■□□□□ 0.29
DDR1-271ENST00000513240 ERCC6LQ2NKX8 1250 aa16.86■□□□□ 0.29
DDR1-271ENST00000513240 TRMT44Q8IYL2 757 aaKnown RBP16.86■□□□□ 0.29
DDR1-271ENST00000513240 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.86■□□□□ 0.29
DDR1-271ENST00000513240 TJP1Q07157 1748 aa16.85■□□□□ 0.29
DDR1-271ENST00000513240 CREBRFQ8IUR6 639 aa16.85■□□□□ 0.29
DDR1-271ENST00000513240 FOXP4Q8IVH2 680 aaPredicted RBP16.85■□□□□ 0.29
DDR1-271ENST00000513240 LRRN4CLQ8ND94 238 aa16.85■□□□□ 0.29
DDR1-271ENST00000513240 GPR101Q96P66 508 aaPredicted RBP16.85■□□□□ 0.29
DDR1-271ENST00000513240 CCDC87Q9NVE4 849 aa16.85■□□□□ 0.29
DDR1-271ENST00000513240 TNS2Q63HR2 1409 aa16.85■□□□□ 0.29
DDR1-271ENST00000513240 MYO5AQ9Y4I1 1855 aaKnown RBP16.85■□□□□ 0.29
DDR1-271ENST00000513240 IGHMBP2P38935 993 aaKnown RBP16.85■□□□□ 0.29
DDR1-271ENST00000513240 PLA2G4AP47712 749 aa16.85■□□□□ 0.29
DDR1-271ENST00000513240 NBPF11Q86T75 865 aa16.85■□□□□ 0.29
DDR1-271ENST00000513240 GPATCH11Q8N954 259 aa16.85■□□□□ 0.29
DDR1-271ENST00000513240 ERO1AQ96HE7 468 aa16.85■□□□□ 0.29
DDR1-271ENST00000513240 SRP68Q9UHB9 627 aaKnown RBP16.85■□□□□ 0.29
DDR1-271ENST00000513240 DCCP43146 1447 aa16.84■□□□□ 0.29
DDR1-271ENST00000513240 ZMYM6O95789 1325 aa16.84■□□□□ 0.29
DDR1-271ENST00000513240 EIF5P55010 431 aaKnown RBP16.84■□□□□ 0.29
DDR1-271ENST00000513240 TRIM29Q14134 588 aa16.84■□□□□ 0.29
DDR1-271ENST00000513240 UBE3CQ15386 1083 aa16.84■□□□□ 0.29
DDR1-271ENST00000513240 VPS54Q9P1Q0 977 aa16.84■□□□□ 0.29
DDR1-271ENST00000513240 TMEM232C9JQI7 657 aa16.84■□□□□ 0.29
DDR1-271ENST00000513240 VEGFAP15692 232 aaPredicted RBP16.84■□□□□ 0.29
DDR1-271ENST00000513240 FGFR2P21802 821 aa16.84■□□□□ 0.29
DDR1-271ENST00000513240 CASQ1P31415 396 aa16.84■□□□□ 0.29
DDR1-271ENST00000513240 TTF1Q15361 905 aaPredicted RBP16.84■□□□□ 0.29
DDR1-271ENST00000513240 PTPN14Q15678 1187 aa16.84■□□□□ 0.29
DDR1-271ENST00000513240 NTRK3Q16288 839 aa16.84■□□□□ 0.29
DDR1-271ENST00000513240 FAM98CQ17RN3 349 aaKnown RBP16.84■□□□□ 0.29
DDR1-271ENST00000513240 FAM47AQ5JRC9 791 aa16.84■□□□□ 0.29
DDR1-271ENST00000513240 ICE2Q659A1 982 aa16.84■□□□□ 0.29
DDR1-271ENST00000513240 SMARCE1Q969G3 411 aa16.84■□□□□ 0.29
DDR1-271ENST00000513240 KCNG1Q9UIX4 513 aa16.84■□□□□ 0.29
DDR1-271ENST00000513240 PCDHB6Q9Y5E3 794 aa16.84■□□□□ 0.29
DDR1-271ENST00000513240 PNMA6AP0CW24 399 aaPredicted RBP16.83■□□□□ 0.29
DDR1-271ENST00000513240 CLCN6P51797 869 aa16.83■□□□□ 0.29
DDR1-271ENST00000513240 FAM193AP78312 1265 aa16.83■□□□□ 0.29
DDR1-271ENST00000513240 SSRP1Q08945 709 aaKnown RBP16.83■□□□□ 0.29
DDR1-271ENST00000513240 KCNG4Q8TDN1 519 aa16.83■□□□□ 0.29
DDR1-271ENST00000513240 CELF1Q92879 486 aaKnown RBP16.83■□□□□ 0.29
DDR1-271ENST00000513240 CABP5Q9NP86 173 aa16.83■□□□□ 0.29
DDR1-271ENST00000513240 BCL9O00512 1426 aa16.83■□□□□ 0.29
DDR1-271ENST00000513240 IL6STP40189 918 aaPredicted RBP16.83■□□□□ 0.28
DDR1-271ENST00000513240 PDE4BQ07343 736 aa16.83■□□□□ 0.28
DDR1-271ENST00000513240 EARS2Q5JPH6 523 aaKnown RBP16.83■□□□□ 0.28
DDR1-271ENST00000513240 AKNAD1Q5T1N1 836 aa16.83■□□□□ 0.28
DDR1-271ENST00000513240 DIS3L2Q8IYB7 885 aaKnown RBP16.83■□□□□ 0.28
DDR1-271ENST00000513240 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.83■□□□□ 0.28
DDR1-271ENST00000513240 ZCCHC17Q9NP64 241 aaKnown RBP16.83■□□□□ 0.28
DDR1-271ENST00000513240 PKD1L3Q7Z443 1732 aa16.83■□□□□ 0.28
DDR1-271ENST00000513240 WNT7AO00755 349 aa16.83■□□□□ 0.28
DDR1-271ENST00000513240 EVCP57679 992 aa16.83■□□□□ 0.28
DDR1-271ENST00000513240 WTAPQ15007 396 aa16.83■□□□□ 0.28
DDR1-271ENST00000513240 NWD2Q9ULI1 1742 aa16.83■□□□□ 0.28
DDR1-271ENST00000513240 CDHR2Q9BYE9 1310 aa16.82■□□□□ 0.28
DDR1-271ENST00000513240 ADAMTS3O15072 1205 aa16.82■□□□□ 0.28
DDR1-271ENST00000513240 CAMTA2O94983 1202 aa16.82■□□□□ 0.28
DDR1-271ENST00000513240 SLU7O95391 586 aaKnown RBP16.82■□□□□ 0.28
DDR1-271ENST00000513240 CYP2D6P10635 497 aa16.82■□□□□ 0.28
DDR1-271ENST00000513240 ARID4AP29374 1257 aaPredicted RBP16.82■□□□□ 0.28
DDR1-271ENST00000513240 SLC39A14Q15043 492 aa16.82■□□□□ 0.28
DDR1-271ENST00000513240 TOB1P50616 345 aaPredicted RBP16.82■□□□□ 0.28
DDR1-271ENST00000513240 ZSCAN26Q16670 478 aa16.82■□□□□ 0.28
DDR1-271ENST00000513240 POLR3EQ9NVU0 708 aa16.82■□□□□ 0.28
DDR1-271ENST00000513240 CTAGE5O15320 804 aa16.81■□□□□ 0.28
DDR1-271ENST00000513240 POLR2DO15514 142 aaKnown RBP16.81■□□□□ 0.28
DDR1-271ENST00000513240 UQCRFS1P1P0C7P4 283 aa16.81■□□□□ 0.28
DDR1-271ENST00000513240 AFMP43652 599 aa16.81■□□□□ 0.28
DDR1-271ENST00000513240 TEX35Q5T0J7 233 aa16.81■□□□□ 0.28
DDR1-271ENST00000513240 KLHL10Q6JEL2 608 aa16.81■□□□□ 0.28
DDR1-271ENST00000513240 CNNM3Q8NE01 707 aa16.81■□□□□ 0.28
DDR1-271ENST00000513240 DRC1Q96MC2 740 aa16.81■□□□□ 0.28
DDR1-271ENST00000513240 PCDHA5Q9Y5H7 936 aa16.81■□□□□ 0.28
DDR1-271ENST00000513240 PLEKHA8P1O95397 391 aa16.81■□□□□ 0.28
DDR1-271ENST00000513240 RTN1Q16799 776 aa16.81■□□□□ 0.28
DDR1-271ENST00000513240 CPLX2Q6PUV4 134 aaKnown RBP16.81■□□□□ 0.28
DDR1-271ENST00000513240 TXLNBQ8N3L3 684 aa16.81■□□□□ 0.28
DDR1-271ENST00000513240 SHISA4Q96DD7 197 aa16.81■□□□□ 0.28
DDR1-271ENST00000513240 FANCLQ9NW38 375 aa16.81■□□□□ 0.28
DDR1-271ENST00000513240 SLIT2O94813 1529 aa16.81■□□□□ 0.28
DDR1-271ENST00000513240 SERPINC1P01008 464 aa16.8■□□□□ 0.28
DDR1-271ENST00000513240 STX17P56962 302 aa16.8■□□□□ 0.28
DDR1-271ENST00000513240 CCDC152Q4G0S7 254 aa16.8■□□□□ 0.28
DDR1-271ENST00000513240 ARMCX5Q6P1M9 558 aa16.8■□□□□ 0.28
DDR1-271ENST00000513240 V9GY48 417 aaPredicted RBP16.8■□□□□ 0.28
DDR1-271ENST00000513240 TOGARAM1Q9Y4F4 1720 aa16.8■□□□□ 0.28
DDR1-271ENST00000513240 CCZ1BP86790 482 aa16.8■□□□□ 0.28
DDR1-271ENST00000513240 CCZ1P86791 482 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms