RNA–Protein interactions for RNA: ENST00000512768.1

NME1-210, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 1 (best)

Gene NME1, Length 1,056 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-210ENST00000512768 JAKMIP1Q96N16 626 aaKnown RBP21.27■■□□□ 1
NME1-210ENST00000512768 CSRNP1Q96S65 589 aa21.27■■□□□ 1
NME1-210ENST00000512768 RNF41Q9H4P4 317 aaPredicted RBP21.27■■□□□ 1
NME1-210ENST00000512768 INCENPQ9NQS7 918 aa21.27■■□□□ 1
NME1-210ENST00000512768 PGAP2Q9UHJ9 254 aa21.27■■□□□ 1
NME1-210ENST00000512768 CLEC11AQ9Y240 323 aa21.27■■□□□ 1
NME1-210ENST00000512768 TACC3Q9Y6A5 838 aa21.27■■□□□ 1
NME1-210ENST00000512768 ADCK5Q3MIX3 580 aa21.26■□□□□ 0.99
NME1-210ENST00000512768 SULF1Q8IWU6 871 aa21.26■□□□□ 0.99
NME1-210ENST00000512768 CDAN1Q8IWY9 1227 aa21.26■□□□□ 0.99
NME1-210ENST00000512768 IL17RAQ96F46 866 aa21.26■□□□□ 0.99
NME1-210ENST00000512768 KIF2CQ99661 725 aa21.26■□□□□ 0.99
NME1-210ENST00000512768 EHD4Q9H223 541 aa21.26■□□□□ 0.99
NME1-210ENST00000512768 SERPINB13Q9UIV8 391 aa21.26■□□□□ 0.99
NME1-210ENST00000512768 SIPA1L1O43166 1804 aa21.26■□□□□ 0.99
NME1-210ENST00000512768 PDE4BQ07343 736 aa21.25■□□□□ 0.99
NME1-210ENST00000512768 TRDNQ13061 729 aa21.25■□□□□ 0.99
NME1-210ENST00000512768 C16orf86Q6ZW13 317 aa21.25■□□□□ 0.99
NME1-210ENST00000512768 CRACR2BQ8N4Y2 399 aaPredicted RBP21.25■□□□□ 0.99
NME1-210ENST00000512768 SLC44A5Q8NCS7 719 aa21.25■□□□□ 0.99
NME1-210ENST00000512768 TEPSINQ96N21 525 aa21.25■□□□□ 0.99
NME1-210ENST00000512768 TOMM22Q9NS69 142 aa21.25■□□□□ 0.99
NME1-210ENST00000512768 PPP2R3BQ9Y5P8 575 aa21.25■□□□□ 0.99
NME1-210ENST00000512768 NEDD4P46934 1319 aa21.25■□□□□ 0.99
NME1-210ENST00000512768 POTEIP0CG38 1075 aa21.24■□□□□ 0.99
NME1-210ENST00000512768 POTEJP0CG39 1038 aa21.24■□□□□ 0.99
NME1-210ENST00000512768 PCP11498 1178 aaKnown RBP21.24■□□□□ 0.99
NME1-210ENST00000512768 PSMA5P28066 241 aa21.24■□□□□ 0.99
NME1-210ENST00000512768 GABPAQ06546 454 aa21.24■□□□□ 0.99
NME1-210ENST00000512768 RRP12Q5JTH9 1297 aaKnown RBP21.24■□□□□ 0.99
NME1-210ENST00000512768 KRT26Q7Z3Y9 468 aa21.24■□□□□ 0.99
NME1-210ENST00000512768 RALYLQ86SE5 291 aaKnown RBP21.24■□□□□ 0.99
NME1-210ENST00000512768 FOXP4Q8IVH2 680 aaPredicted RBP21.24■□□□□ 0.99
NME1-210ENST00000512768 NEK1Q96PY6 1258 aa21.24■□□□□ 0.99
NME1-210ENST00000512768 TRIM34Q9BYJ4 488 aa21.24■□□□□ 0.99
NME1-210ENST00000512768 TM6SF1Q9BZW5 370 aa21.24■□□□□ 0.99
NME1-210ENST00000512768 CNNM2Q9H8M5 875 aa21.24■□□□□ 0.99
NME1-210ENST00000512768 TSHZ2Q9NRE2 1034 aa21.24■□□□□ 0.99
NME1-210ENST00000512768 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.24■□□□□ 0.99
NME1-210ENST00000512768 ADM5C9JUS6 153 aa21.23■□□□□ 0.99
NME1-210ENST00000512768 ORC4O43929 436 aa21.23■□□□□ 0.99
NME1-210ENST00000512768 PRDM1O75626 825 aa21.23■□□□□ 0.99
NME1-210ENST00000512768 FGRP09769 529 aa21.23■□□□□ 0.99
NME1-210ENST00000512768 SLURP2P0DP57 97 aa21.23■□□□□ 0.99
NME1-210ENST00000512768 CASTP20810 708 aaKnown RBP21.23■□□□□ 0.99
NME1-210ENST00000512768 CDK8P49336 464 aa21.23■□□□□ 0.99
NME1-210ENST00000512768 NCOA7Q8NI08 942 aa21.23■□□□□ 0.99
NME1-210ENST00000512768 KRT23Q9C075 422 aa21.23■□□□□ 0.99
NME1-210ENST00000512768 MKNK2Q9HBH9 465 aa21.23■□□□□ 0.99
NME1-210ENST00000512768 ZNF287Q9HBT7 754 aa21.23■□□□□ 0.99
NME1-210ENST00000512768 SWAP70Q9UH65 585 aa21.23■□□□□ 0.99
NME1-210ENST00000512768 FAM196BA6NMK8 535 aa21.22■□□□□ 0.99
NME1-210ENST00000512768 B4E1Z4 1266 aa21.22■□□□□ 0.99
NME1-210ENST00000512768 PRAMEF18Q5VWM3 479 aa21.22■□□□□ 0.99
NME1-210ENST00000512768 BLOC1S2Q6QNY1 142 aa21.22■□□□□ 0.99
NME1-210ENST00000512768 USP48Q86UV5 1035 aa21.22■□□□□ 0.99
NME1-210ENST00000512768 METTL16Q86W50 562 aaKnown RBP21.22■□□□□ 0.99
NME1-210ENST00000512768 TAOK2Q9UL54 1235 aa21.22■□□□□ 0.99
NME1-210ENST00000512768 MYH8P13535 1937 aa21.21■□□□□ 0.99
NME1-210ENST00000512768 CPA1P15085 419 aa21.21■□□□□ 0.99
NME1-210ENST00000512768 COL9A3Q14050 684 aaPredicted RBP21.21■□□□□ 0.99
NME1-210ENST00000512768 RABEP1Q15276 862 aa21.21■□□□□ 0.99
NME1-210ENST00000512768 NBPF12Q5TAG4 269 aaPredicted RBP21.21■□□□□ 0.99
NME1-210ENST00000512768 LDHDQ86WU2 507 aa21.21■□□□□ 0.99
NME1-210ENST00000512768 UPF3BQ9BZI7 483 aaKnown RBP21.21■□□□□ 0.99
NME1-210ENST00000512768 DNAJC18Q9H819 358 aa21.21■□□□□ 0.99
NME1-210ENST00000512768 ZSWIM6Q9HCJ5 1215 aa21.21■□□□□ 0.99
NME1-210ENST00000512768 HERC5Q9UII4 1024 aaKnown RBP21.21■□□□□ 0.99
NME1-210ENST00000512768 CYP46A1Q9Y6A2 500 aa21.21■□□□□ 0.99
NME1-210ENST00000512768 RANBP6O60518 1105 aaKnown RBP21.2■□□□□ 0.98
NME1-210ENST00000512768 HMGB1P09429 215 aaKnown RBP21.2■□□□□ 0.98
NME1-210ENST00000512768 SHMT1P34896 483 aa21.2■□□□□ 0.98
NME1-210ENST00000512768 DLK2Q6UY11 383 aa21.2■□□□□ 0.98
NME1-210ENST00000512768 CDC37L1Q7L3B6 337 aa21.2■□□□□ 0.98
NME1-210ENST00000512768 MIGA2Q7L4E1 593 aa21.2■□□□□ 0.98
NME1-210ENST00000512768 MB21D2Q8IYB1 491 aaPredicted RBP21.2■□□□□ 0.98
NME1-210ENST00000512768 ZNF444Q8N0Y2 327 aaPredicted RBP21.2■□□□□ 0.98
NME1-210ENST00000512768 NKX2-3Q8TAU0 364 aa21.2■□□□□ 0.98
NME1-210ENST00000512768 ESR2Q92731 530 aa21.2■□□□□ 0.98
NME1-210ENST00000512768 HOOK2Q96ED9 719 aa21.2■□□□□ 0.98
NME1-210ENST00000512768 GLIS2Q9BZE0 524 aaPredicted RBP21.2■□□□□ 0.98
NME1-210ENST00000512768 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.2■□□□□ 0.98
NME1-210ENST00000512768 GPBP1L1Q9HC44 474 aaPredicted RBP21.2■□□□□ 0.98
NME1-210ENST00000512768 TBC1D12O60347 775 aa21.19■□□□□ 0.98
NME1-210ENST00000512768 KDM4AO75164 1064 aa21.19■□□□□ 0.98
NME1-210ENST00000512768 RASA1P20936 1047 aa21.19■□□□□ 0.98
NME1-210ENST00000512768 RPS6KB1P23443 525 aa21.19■□□□□ 0.98
NME1-210ENST00000512768 SUPT20HL1Q3ZLR7 823 aa21.19■□□□□ 0.98
NME1-210ENST00000512768 MAP1SQ66K74 1059 aaPredicted RBP21.19■□□□□ 0.98
NME1-210ENST00000512768 RUFY3Q7L099 469 aa21.19■□□□□ 0.98
NME1-210ENST00000512768 DHX32Q7L7V1 743 aaKnown RBP21.19■□□□□ 0.98
NME1-210ENST00000512768 MCM5P33992 734 aa21.18■□□□□ 0.98
NME1-210ENST00000512768 NEK4P51957 841 aa21.18■□□□□ 0.98
NME1-210ENST00000512768 FAM47AQ5JRC9 791 aa21.18■□□□□ 0.98
NME1-210ENST00000512768 CYB5R4Q7L1T6 521 aa21.18■□□□□ 0.98
NME1-210ENST00000512768 ZSWIM5Q9P217 1185 aa21.18■□□□□ 0.98
NME1-210ENST00000512768 PRC1O43663 620 aa21.17■□□□□ 0.98
NME1-210ENST00000512768 NT5C2P49902 561 aa21.17■□□□□ 0.98
NME1-210ENST00000512768 TFAP4Q01664 338 aa21.17■□□□□ 0.98
NME1-210ENST00000512768 MAP3K10Q02779 954 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms