RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 PTCH2Q9Y6C5 1203 aa19.87■□□□□ 0.77
LMNA-222ENST00000508500 ECM2O94769 699 aaPredicted RBP19.86■□□□□ 0.77
LMNA-222ENST00000508500 ANTXR1Q9H6X2 564 aa19.86■□□□□ 0.77
LMNA-222ENST00000508500 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.86■□□□□ 0.771e-6■■■■■ 53.3
LMNA-222ENST00000508500 ZBTB40Q9NUA8 1239 aa19.86■□□□□ 0.77
LMNA-222ENST00000508500 CYP2C8P10632 490 aa19.85■□□□□ 0.77
LMNA-222ENST00000508500 DYNLL1P63167 89 aaKnown RBP19.85■□□□□ 0.77
LMNA-222ENST00000508500 IL1RAPL2Q9NP60 686 aa19.85■□□□□ 0.77
LMNA-222ENST00000508500 PICK1Q9NRD5 415 aa19.85■□□□□ 0.77
LMNA-222ENST00000508500 MS4A1P11836 297 aa19.84■□□□□ 0.77
LMNA-222ENST00000508500 EN2P19622 333 aaPredicted RBP19.84■□□□□ 0.77
LMNA-222ENST00000508500 AACSQ86V21 672 aa19.84■□□□□ 0.77
LMNA-222ENST00000508500 RHPN1Q8TCX5 695 aa19.84■□□□□ 0.77
LMNA-222ENST00000508500 TGFBRAP1Q8WUH2 860 aa19.84■□□□□ 0.77
LMNA-222ENST00000508500 RCAN3Q9UKA8 241 aa19.84■□□□□ 0.77
LMNA-222ENST00000508500 BAG3O95817 575 aa19.83■□□□□ 0.77
LMNA-222ENST00000508500 BCRP11274 1271 aa19.83■□□□□ 0.77
LMNA-222ENST00000508500 JAG1P78504 1218 aa19.83■□□□□ 0.77
LMNA-222ENST00000508500 C20orf194Q5TEA3 1177 aa19.83■□□□□ 0.77
LMNA-222ENST00000508500 ERC1Q8IUD2 1116 aa19.83■□□□□ 0.77
LMNA-222ENST00000508500 MAPKAPK5Q8IW41 473 aa19.83■□□□□ 0.77
LMNA-222ENST00000508500 TRIM47Q96LD4 638 aa19.83■□□□□ 0.77
LMNA-222ENST00000508500 DNAJC18Q9H819 358 aa19.83■□□□□ 0.77
LMNA-222ENST00000508500 DDX19BQ9UMR2 479 aa19.83■□□□□ 0.77
LMNA-222ENST00000508500 MYH7P12883 1935 aa19.82■□□□□ 0.76
LMNA-222ENST00000508500 FLT1P17948 1338 aa19.82■□□□□ 0.76
LMNA-222ENST00000508500 TRIM75PA6NK02 468 aa19.82■□□□□ 0.76
LMNA-222ENST00000508500 CAP2P40123 477 aa19.82■□□□□ 0.76
LMNA-222ENST00000508500 GADL1Q6ZQY3 521 aa19.82■□□□□ 0.76
LMNA-222ENST00000508500 RPAP2Q8IXW5 612 aaPredicted RBP19.82■□□□□ 0.76
LMNA-222ENST00000508500 DDX60LQ5H9U9 1706 aaKnown RBP19.82■□□□□ 0.76
LMNA-222ENST00000508500 IGSF3O75054 1194 aa19.81■□□□□ 0.76
LMNA-222ENST00000508500 CYP7A1P22680 504 aa19.81■□□□□ 0.76
LMNA-222ENST00000508500 ARHGEF6Q15052 776 aa19.81■□□□□ 0.76
LMNA-222ENST00000508500 FASTKD5Q7L8L6 764 aaKnown RBP19.81■□□□□ 0.76
LMNA-222ENST00000508500 METTL16Q86W50 562 aaKnown RBP19.81■□□□□ 0.76
LMNA-222ENST00000508500 NOL10Q9BSC4 688 aaKnown RBP19.81■□□□□ 0.76
LMNA-222ENST00000508500 PI4KBQ9UBF8 816 aa19.81■□□□□ 0.76
LMNA-222ENST00000508500 PALD1Q9ULE6 856 aa19.81■□□□□ 0.76
LMNA-222ENST00000508500 NAV1Q8NEY1 1877 aa19.8■□□□□ 0.76
LMNA-222ENST00000508500 IDH1O75874 414 aaKnown RBP19.8■□□□□ 0.76
LMNA-222ENST00000508500 PSMC4P43686 418 aa19.8■□□□□ 0.76
LMNA-222ENST00000508500 KIF22Q14807 665 aa19.8■□□□□ 0.76
LMNA-222ENST00000508500 SHROOM1Q2M3G4 852 aaPredicted RBP19.8■□□□□ 0.76
LMNA-222ENST00000508500 TREML2Q5T2D2 321 aa19.8■□□□□ 0.76
LMNA-222ENST00000508500 MAGEB6Q8N7X4 407 aa19.8■□□□□ 0.76
LMNA-222ENST00000508500 SH3TC2Q8TF17 1288 aa19.8■□□□□ 0.76
LMNA-222ENST00000508500 GCC1Q96CN9 775 aa19.8■□□□□ 0.76
LMNA-222ENST00000508500 PARK7Q99497 189 aaKnown RBP19.8■□□□□ 0.76
LMNA-222ENST00000508500 DHX36Q9H2U1 1008 aaKnown RBP19.8■□□□□ 0.76
LMNA-222ENST00000508500 HERC5Q9UII4 1024 aaKnown RBP19.8■□□□□ 0.76
LMNA-222ENST00000508500 APBB1O00213 710 aa19.79■□□□□ 0.76
LMNA-222ENST00000508500 PLCG2P16885 1265 aa19.79■□□□□ 0.76
LMNA-222ENST00000508500 OSBPP22059 807 aa19.79■□□□□ 0.76
LMNA-222ENST00000508500 SPP2Q13103 211 aa19.79■□□□□ 0.76
LMNA-222ENST00000508500 HSP90AB4PQ58FF6 505 aa19.79■□□□□ 0.76
LMNA-222ENST00000508500 HABP4Q5JVS0 413 aaKnown RBP19.79■□□□□ 0.76
LMNA-222ENST00000508500 MIGA1Q8NAN2 632 aa19.79■□□□□ 0.76
LMNA-222ENST00000508500 SLC45A1Q9Y2W3 748 aa19.79■□□□□ 0.76
LMNA-222ENST00000508500 GNRH1P01148 92 aa19.78■□□□□ 0.76
LMNA-222ENST00000508500 SLC9C1Q4G0N8 1177 aa19.78■□□□□ 0.76
LMNA-222ENST00000508500 ZNF280CQ8ND82 737 aa19.78■□□□□ 0.76
LMNA-222ENST00000508500 KIF1BPQ96EK5 621 aa19.78■□□□□ 0.76
LMNA-222ENST00000508500 SRRDQ9UH36 339 aa19.78■□□□□ 0.76
LMNA-222ENST00000508500 SAP30BPQ9UHR5 308 aaKnown RBP19.78■□□□□ 0.76
LMNA-222ENST00000508500 AGTPBP1Q9UPW5 1226 aa19.78■□□□□ 0.76
LMNA-222ENST00000508500 BAZ2AQ9UIF9 1905 aaKnown RBP19.78■□□□□ 0.76
LMNA-222ENST00000508500 SLC4A8Q2Y0W8 1093 aa19.77■□□□□ 0.76
LMNA-222ENST00000508500 FOXP4Q8IVH2 680 aaPredicted RBP19.77■□□□□ 0.76
LMNA-222ENST00000508500 PLXNB2O15031 1838 aa19.76■□□□□ 0.75
LMNA-222ENST00000508500 USP17L5A8MUK1 530 aa19.76■□□□□ 0.75
LMNA-222ENST00000508500 PRMT2P55345 433 aa19.76■□□□□ 0.75
LMNA-222ENST00000508500 SH3D19Q5HYK7 790 aa19.76■□□□□ 0.75
LMNA-222ENST00000508500 CLASRPQ8N2M8 674 aaKnown RBP19.76■□□□□ 0.75
LMNA-222ENST00000508500 RIOK1Q9BRS2 568 aaKnown RBP19.76■□□□□ 0.75
LMNA-222ENST00000508500 MYH8P13535 1937 aa19.76■□□□□ 0.75
LMNA-222ENST00000508500 FMNL1O95466 1100 aaPredicted RBP19.75■□□□□ 0.75
LMNA-222ENST00000508500 MYCP01106 439 aaPredicted RBP19.75■□□□□ 0.75
LMNA-222ENST00000508500 HMGCS2P54868 508 aa19.75■□□□□ 0.75
LMNA-222ENST00000508500 PDE3AQ14432 1141 aa19.75■□□□□ 0.75
LMNA-222ENST00000508500 NBPF11Q86T75 865 aa19.75■□□□□ 0.75
LMNA-222ENST00000508500 PROCA1Q8NCQ7 364 aaPredicted RBP19.75■□□□□ 0.75
LMNA-222ENST00000508500 EDC3Q96F86 508 aaKnown RBP19.75■□□□□ 0.75
LMNA-222ENST00000508500 GABRQQ9UN88 632 aa19.75■□□□□ 0.75
LMNA-222ENST00000508500 CEP290O15078 2479 aa19.74■□□□□ 0.75
LMNA-222ENST00000508500 HMMRO75330 724 aa19.74■□□□□ 0.75
LMNA-222ENST00000508500 GDF11O95390 407 aa19.74■□□□□ 0.75
LMNA-222ENST00000508500 MAP3K12Q12852 859 aa19.74■□□□□ 0.75
LMNA-222ENST00000508500 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.74■□□□□ 0.75
LMNA-222ENST00000508500 WDR18Q9BV38 432 aa19.74■□□□□ 0.75
LMNA-222ENST00000508500 TBC1D2Q9BYX2 928 aa19.74■□□□□ 0.75
LMNA-222ENST00000508500 MYPNQ86TC9 1320 aa19.74■□□□□ 0.75
LMNA-222ENST00000508500 RAB11FIP3O75154 756 aa19.73■□□□□ 0.75
LMNA-222ENST00000508500 PRKCZQ05513 592 aa19.73■□□□□ 0.75
LMNA-222ENST00000508500 MTFR1Q15390 333 aa19.73■□□□□ 0.75
LMNA-222ENST00000508500 SHISA4Q96DD7 197 aa19.73■□□□□ 0.75
LMNA-222ENST00000508500 TMEM106CQ9BVX2 250 aa19.73■□□□□ 0.75
LMNA-222ENST00000508500 TCRBV5S4A2TA0A5A2 114 aa19.72■□□□□ 0.75
LMNA-222ENST00000508500 GOLIM4O00461 696 aa19.72■□□□□ 0.75
LMNA-222ENST00000508500 ASNSP08243 561 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms