RNA–Protein interactions for RNA: ENST00000508386.1

KDM3B-205, Transcript of lysine demethylase 3B, humanhuman

TSL 4

Gene KDM3B, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-205ENST00000508386 RAPGEFL1Q9UHV5 662 aa7.29□□□□□ -1.24
KDM3B-205ENST00000508386 AFG3L2Q9Y4W6 797 aa7.29□□□□□ -1.24
KDM3B-205ENST00000508386 NCOR1O75376 2440 aa7.29□□□□□ -1.24
KDM3B-205ENST00000508386 RPTORQ8N122 1335 aa7.28□□□□□ -1.24
KDM3B-205ENST00000508386 MYBBP1AQ9BQG0 1328 aaKnown RBP7.28□□□□□ -1.24
KDM3B-205ENST00000508386 BDP1A6H8Y1 2624 aa7.28□□□□□ -1.24
KDM3B-205ENST00000508386 PEX10O60683 326 aa7.28□□□□□ -1.24
KDM3B-205ENST00000508386 COL6A1P12109 1028 aa7.28□□□□□ -1.24
KDM3B-205ENST00000508386 FKBP5Q13451 457 aaPredicted RBP7.28□□□□□ -1.24
KDM3B-205ENST00000508386 WDR43Q15061 677 aaKnown RBP eCLIP7.28□□□□□ -1.24
KDM3B-205ENST00000508386 TWISTNBQ3B726 338 aaPredicted RBP7.28□□□□□ -1.24
KDM3B-205ENST00000508386 LRRC24Q50LG9 513 aa7.28□□□□□ -1.24
KDM3B-205ENST00000508386 TREML2Q5T2D2 321 aa7.28□□□□□ -1.24
KDM3B-205ENST00000508386 DCAF15Q66K64 600 aa7.28□□□□□ -1.24
KDM3B-205ENST00000508386 HHIPL2Q6UWX4 724 aa7.28□□□□□ -1.24
KDM3B-205ENST00000508386 LARP6Q9BRS8 491 aaKnown RBP7.28□□□□□ -1.24
KDM3B-205ENST00000508386 UBE2OQ9C0C9 1292 aaKnown RBP7.28□□□□□ -1.24
KDM3B-205ENST00000508386 MYH16Q9H6N6 1097 aa7.28□□□□□ -1.24
KDM3B-205ENST00000508386 ZHX2Q9Y6X8 837 aa7.28□□□□□ -1.24
KDM3B-205ENST00000508386 RPAP1Q9BWH6 1393 aaPredicted RBP7.28□□□□□ -1.24
KDM3B-205ENST00000508386 COL2A1P02458 1487 aaPredicted RBP7.28□□□□□ -1.24
KDM3B-205ENST00000508386 TNPO2O14787 897 aaKnown RBP7.27□□□□□ -1.25
KDM3B-205ENST00000508386 VAMP4O75379 141 aa7.27□□□□□ -1.25
KDM3B-205ENST00000508386 PTPRAP18433 802 aa7.27□□□□□ -1.25
KDM3B-205ENST00000508386 FOXK1P85037 733 aa7.27□□□□□ -1.25
KDM3B-205ENST00000508386 MDM2Q00987 491 aaPredicted RBP7.27□□□□□ -1.25
KDM3B-205ENST00000508386 MAP3K10Q02779 954 aa7.27□□□□□ -1.25
KDM3B-205ENST00000508386 DIXDC1Q155Q3 683 aa7.27□□□□□ -1.25
KDM3B-205ENST00000508386 LRRC26Q2I0M4 334 aa7.27□□□□□ -1.25
KDM3B-205ENST00000508386 CCDC57Q2TAC2 916 aa7.27□□□□□ -1.25
KDM3B-205ENST00000508386 MAP3K21Q5TCX8 1036 aa7.27□□□□□ -1.25
KDM3B-205ENST00000508386 FAM109BQ6ICB4 259 aaPredicted RBP7.27□□□□□ -1.25
KDM3B-205ENST00000508386 ANKRD13CQ8N6S4 541 aa7.27□□□□□ -1.25
KDM3B-205ENST00000508386 ANKLE1Q8NAG6 615 aa7.27□□□□□ -1.25
KDM3B-205ENST00000508386 SUCLG2Q96I99 432 aa7.27□□□□□ -1.25
KDM3B-205ENST00000508386 STK31Q9BXU1 1019 aa7.27□□□□□ -1.25
KDM3B-205ENST00000508386 NBPF3Q9H094 633 aa7.27□□□□□ -1.25
KDM3B-205ENST00000508386 WDR70Q9NW82 654 aa7.27□□□□□ -1.25
KDM3B-205ENST00000508386 OGDHLQ9ULD0 1010 aa7.27□□□□□ -1.25
KDM3B-205ENST00000508386 DAGLAQ9Y4D2 1042 aa7.27□□□□□ -1.25
KDM3B-205ENST00000508386 PLXNB2O15031 1838 aa7.27□□□□□ -1.25
KDM3B-205ENST00000508386 PHIPQ8WWQ0 1821 aa7.27□□□□□ -1.25
KDM3B-205ENST00000508386 DDX60LQ5H9U9 1706 aaKnown RBP7.27□□□□□ -1.25
KDM3B-205ENST00000508386 GRM8O00222 908 aa7.26□□□□□ -1.25
KDM3B-205ENST00000508386 CAPN2P17655 700 aa7.26□□□□□ -1.25
KDM3B-205ENST00000508386 FGFR2P21802 821 aa7.26□□□□□ -1.25
KDM3B-205ENST00000508386 RRP1BQ14684 758 aaKnown RBP7.26□□□□□ -1.25
KDM3B-205ENST00000508386 MFSD10Q14728 455 aa7.26□□□□□ -1.25
KDM3B-205ENST00000508386 POTEEQ6S8J3 1075 aa7.26□□□□□ -1.25
KDM3B-205ENST00000508386 GADL1Q6ZQY3 521 aa7.26□□□□□ -1.25
KDM3B-205ENST00000508386 SCYL3Q8IZE3 742 aa7.26□□□□□ -1.25
KDM3B-205ENST00000508386 KLHDC4Q8TBB5 520 aa7.26□□□□□ -1.25
KDM3B-205ENST00000508386 TBC1D22AQ8WUA7 517 aa7.26□□□□□ -1.25
KDM3B-205ENST00000508386 TRIB2Q92519 343 aa7.26□□□□□ -1.25
KDM3B-205ENST00000508386 DDX27Q96GQ7 796 aaKnown RBP7.26□□□□□ -1.25
KDM3B-205ENST00000508386 CDX2Q99626 313 aaPredicted RBP7.26□□□□□ -1.25
KDM3B-205ENST00000508386 C11orf49Q9H6J7 331 aa7.26□□□□□ -1.25
KDM3B-205ENST00000508386 SLC45A1Q9Y2W3 748 aa7.26□□□□□ -1.25
KDM3B-205ENST00000508386 PTPRFP10586 1907 aa7.26□□□□□ -1.25
KDM3B-205ENST00000508386 DDTLA6NHG4 134 aaPredicted RBP7.25□□□□□ -1.25
KDM3B-205ENST00000508386 NBPF7P0C2Y1 421 aaPredicted RBP7.25□□□□□ -1.25
KDM3B-205ENST00000508386 PRDX5P30044 214 aa7.25□□□□□ -1.25
KDM3B-205ENST00000508386 CALD1Q05682 793 aaKnown RBP7.25□□□□□ -1.25
KDM3B-205ENST00000508386 TAF7LQ5H9L4 462 aa7.25□□□□□ -1.25
KDM3B-205ENST00000508386 PPP1R15BQ5SWA1 713 aa7.25□□□□□ -1.25
KDM3B-205ENST00000508386 FASTKD5Q7L8L6 764 aaKnown RBP7.25□□□□□ -1.25
KDM3B-205ENST00000508386 WWC1Q8IX03 1113 aa7.25□□□□□ -1.25
KDM3B-205ENST00000508386 ANKRD44Q8N8A2 993 aa7.25□□□□□ -1.25
KDM3B-205ENST00000508386 HOOK2Q96ED9 719 aa7.25□□□□□ -1.25
KDM3B-205ENST00000508386 TTYH1Q9H313 450 aaPredicted RBP7.25□□□□□ -1.25
KDM3B-205ENST00000508386 SEMA6BQ9H3T3 888 aa7.25□□□□□ -1.25
KDM3B-205ENST00000508386 DDX4Q9NQI0 724 aaKnown RBP7.25□□□□□ -1.25
KDM3B-205ENST00000508386 TMOD2Q9NZR1 351 aa7.25□□□□□ -1.25
KDM3B-205ENST00000508386 SUGT1Q9Y2Z0 365 aa7.25□□□□□ -1.25
KDM3B-205ENST00000508386 XIRP2A4UGR9 3374 aa7.25□□□□□ -1.25
KDM3B-205ENST00000508386 REV3LO60673 3130 aa7.24□□□□□ -1.25
KDM3B-205ENST00000508386 RFX7Q2KHR2 1363 aa7.24□□□□□ -1.25
KDM3B-205ENST00000508386 CHD9Q3L8U1 2897 aa7.24□□□□□ -1.25
KDM3B-205ENST00000508386 TRIM75PA6NK02 468 aa7.24□□□□□ -1.25
KDM3B-205ENST00000508386 PDE8BO95263 885 aa7.24□□□□□ -1.25
KDM3B-205ENST00000508386 HMGCRP04035 888 aa7.24□□□□□ -1.25
KDM3B-205ENST00000508386 COL9A1P20849 921 aa7.24□□□□□ -1.25
KDM3B-205ENST00000508386 DDX10Q13206 875 aaKnown RBP7.24□□□□□ -1.25
KDM3B-205ENST00000508386 DSG2Q14126 1118 aa7.24□□□□□ -1.25
KDM3B-205ENST00000508386 FAM110CQ1W6H9 321 aa7.24□□□□□ -1.25
KDM3B-205ENST00000508386 RABL6Q3YEC7 729 aaPredicted RBP7.24□□□□□ -1.25
KDM3B-205ENST00000508386 CCDC184Q52MB2 194 aa7.24□□□□□ -1.25
KDM3B-205ENST00000508386 VPS37DQ86XT2 251 aa7.24□□□□□ -1.25
KDM3B-205ENST00000508386 MARVELD3Q96A59 401 aa7.24□□□□□ -1.25
KDM3B-205ENST00000508386 COA7Q96BR5 231 aa7.24□□□□□ -1.25
KDM3B-205ENST00000508386 CHMP4AQ9BY43 222 aa7.24□□□□□ -1.25
KDM3B-205ENST00000508386 TXNRD2Q9NNW7 524 aa7.24□□□□□ -1.25
KDM3B-205ENST00000508386 HMX1Q9NP08 348 aaPredicted RBP7.24□□□□□ -1.25
KDM3B-205ENST00000508386 USP40Q9NVE5 1235 aa7.24□□□□□ -1.25
KDM3B-205ENST00000508386 AGTPBP1Q9UPW5 1226 aa7.24□□□□□ -1.25
KDM3B-205ENST00000508386 AK9Q5TCS8 1911 aa7.24□□□□□ -1.25
KDM3B-205ENST00000508386 MROH5Q6ZUA9 1318 aa7.24□□□□□ -1.25
KDM3B-205ENST00000508386 FAM196BA6NMK8 535 aa7.23□□□□□ -1.25
KDM3B-205ENST00000508386 FRAT2O75474 233 aaPredicted RBP7.23□□□□□ -1.25
KDM3B-205ENST00000508386 CYP2B6P20813 491 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms