RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 BIVM-ERCC5R4GMW8 1640 aa12.19□□□□□ -0.46
PDLIM5-210ENST00000508216 NUTM2FA1L443 756 aa12.18□□□□□ -0.46
PDLIM5-210ENST00000508216 CCDC69A6NI79 296 aa12.18□□□□□ -0.46
PDLIM5-210ENST00000508216 EIF3FO00303 357 aaPredicted RBP12.18□□□□□ -0.46
PDLIM5-210ENST00000508216 BBOX1O75936 387 aa12.18□□□□□ -0.46
PDLIM5-210ENST00000508216 IRAK1P51617 712 aa12.18□□□□□ -0.46
PDLIM5-210ENST00000508216 SH3BGRP55822 239 aaPredicted RBP12.18□□□□□ -0.46
PDLIM5-210ENST00000508216 LMNB2Q03252 620 aa12.18□□□□□ -0.46
PDLIM5-210ENST00000508216 PPFIA1Q13136 1202 aa12.18□□□□□ -0.46
PDLIM5-210ENST00000508216 EIF2B5Q13144 721 aaKnown RBP12.18□□□□□ -0.46
PDLIM5-210ENST00000508216 SGSM1Q2NKQ1 1148 aa12.18□□□□□ -0.46
PDLIM5-210ENST00000508216 E4F1Q66K89 784 aaPredicted RBP12.18□□□□□ -0.46
PDLIM5-210ENST00000508216 LHX8Q68G74 356 aa12.18□□□□□ -0.46
PDLIM5-210ENST00000508216 FAAH2Q6GMR7 532 aa12.18□□□□□ -0.46
PDLIM5-210ENST00000508216 IL17RAQ96F46 866 aa12.18□□□□□ -0.46
PDLIM5-210ENST00000508216 NAT10Q9H0A0 1025 aaKnown RBP12.18□□□□□ -0.46
PDLIM5-210ENST00000508216 BHMT2Q9H2M3 363 aa12.18□□□□□ -0.46
PDLIM5-210ENST00000508216 C1orf115Q9H7X2 142 aa12.18□□□□□ -0.46
PDLIM5-210ENST00000508216 WDR70Q9NW82 654 aa12.18□□□□□ -0.46
PDLIM5-210ENST00000508216 WDR35Q9P2L0 1181 aa12.18□□□□□ -0.46
PDLIM5-210ENST00000508216 C15orf41Q9Y2V0 281 aa12.18□□□□□ -0.46
PDLIM5-210ENST00000508216 C2orf72A6NCS6 295 aa12.18□□□□□ -0.46
PDLIM5-210ENST00000508216 ATP9BO43861 1147 aa12.18□□□□□ -0.46
PDLIM5-210ENST00000508216 TBC1D12O60347 775 aa12.18□□□□□ -0.46
PDLIM5-210ENST00000508216 MTRF1O75570 445 aaKnown RBP12.18□□□□□ -0.46
PDLIM5-210ENST00000508216 TMCC1O94876 653 aa12.18□□□□□ -0.46
PDLIM5-210ENST00000508216 PARP1P09874 1014 aaKnown RBP12.18□□□□□ -0.46
PDLIM5-210ENST00000508216 CMPK2Q5EBM0 449 aa12.18□□□□□ -0.46
PDLIM5-210ENST00000508216 PRPF40BQ6NWY9 871 aaKnown RBP12.18□□□□□ -0.46
PDLIM5-210ENST00000508216 BICDL1Q6ZP65 573 aa12.18□□□□□ -0.46
PDLIM5-210ENST00000508216 CEP57Q86XR8 500 aa12.18□□□□□ -0.46
PDLIM5-210ENST00000508216 RPAP2Q8IXW5 612 aaPredicted RBP12.18□□□□□ -0.46
PDLIM5-210ENST00000508216 FUKQ8N0W3 1084 aa12.18□□□□□ -0.46
PDLIM5-210ENST00000508216 P3H4Q92791 437 aa12.18□□□□□ -0.46
PDLIM5-210ENST00000508216 YIPF3Q9GZM5 350 aa12.18□□□□□ -0.46
PDLIM5-210ENST00000508216 ATP6V0A2Q9Y487 856 aa12.18□□□□□ -0.46
PDLIM5-210ENST00000508216 BZW2Q9Y6E2 419 aaKnown RBP12.18□□□□□ -0.46
PDLIM5-210ENST00000508216 MYOM2P54296 1465 aa12.17□□□□□ -0.46
PDLIM5-210ENST00000508216 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.17□□□□□ -0.46
PDLIM5-210ENST00000508216 LBRQ14739 615 aaKnown RBP12.17□□□□□ -0.46
PDLIM5-210ENST00000508216 EMC10Q5UCC4 262 aa12.17□□□□□ -0.46
PDLIM5-210ENST00000508216 CREB3L3Q68CJ9 461 aa12.17□□□□□ -0.46
PDLIM5-210ENST00000508216 CARD6Q9BX69 1037 aa12.17□□□□□ -0.46
PDLIM5-210ENST00000508216 OXCT2Q9BYC2 517 aaPredicted RBP12.17□□□□□ -0.46
PDLIM5-210ENST00000508216 ZFATQ9P243 1243 aa12.17□□□□□ -0.46
PDLIM5-210ENST00000508216 MYO1AQ9UBC5 1043 aa12.17□□□□□ -0.46
PDLIM5-210ENST00000508216 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.17□□□□□ -0.46
PDLIM5-210ENST00000508216 FRMD3A2A2Y4 597 aa12.16□□□□□ -0.46
PDLIM5-210ENST00000508216 PALM3A6NDB9 673 aaPredicted RBP12.16□□□□□ -0.46
PDLIM5-210ENST00000508216 ZBED4O75132 1171 aa12.16□□□□□ -0.46
PDLIM5-210ENST00000508216 OXCT1P55809 520 aa12.16□□□□□ -0.46
PDLIM5-210ENST00000508216 ATP2B2Q01814 1243 aa12.16□□□□□ -0.46
PDLIM5-210ENST00000508216 CNGA3Q16281 694 aa12.16□□□□□ -0.46
PDLIM5-210ENST00000508216 LARP1BQ659C4 914 aaKnown RBP12.16□□□□□ -0.46
PDLIM5-210ENST00000508216 CCDC70Q6NSX1 233 aa12.16□□□□□ -0.46
PDLIM5-210ENST00000508216 ATF7IPQ6VMQ6 1270 aa12.16□□□□□ -0.46
PDLIM5-210ENST00000508216 CCDC13Q8IYE1 715 aa12.16□□□□□ -0.46
PDLIM5-210ENST00000508216 RABL2AQ9UBK7 228 aaPredicted RBP12.16□□□□□ -0.46
PDLIM5-210ENST00000508216 ADAMTS8Q9UP79 889 aa12.16□□□□□ -0.46
PDLIM5-210ENST00000508216 ATP6V1DQ9Y5K8 247 aa12.16□□□□□ -0.46
PDLIM5-210ENST00000508216 PCF11O94913 1555 aaKnown RBP12.16□□□□□ -0.46
PDLIM5-210ENST00000508216 TARSL2A2RTX5 802 aaKnown RBP12.15□□□□□ -0.46
PDLIM5-210ENST00000508216 RASSF10A6NK89 507 aa12.15□□□□□ -0.46
PDLIM5-210ENST00000508216 RNF40O75150 1001 aa12.15□□□□□ -0.46
PDLIM5-210ENST00000508216 STK10O94804 968 aaKnown RBP12.15□□□□□ -0.46
PDLIM5-210ENST00000508216 TROVE2P10155 538 aaKnown RBP eCLIP12.15□□□□□ -0.46
PDLIM5-210ENST00000508216 ATP4AP20648 1035 aa12.15□□□□□ -0.46
PDLIM5-210ENST00000508216 SMARCA1P28370 1054 aa12.15□□□□□ -0.46
PDLIM5-210ENST00000508216 TYRO3Q06418 890 aa12.15□□□□□ -0.46
PDLIM5-210ENST00000508216 XRCC4Q13426 336 aa12.15□□□□□ -0.46
PDLIM5-210ENST00000508216 CASP8Q14790 479 aa12.15□□□□□ -0.46
PDLIM5-210ENST00000508216 TRIM65Q6PJ69 517 aa12.15□□□□□ -0.46
PDLIM5-210ENST00000508216 NCCRP1Q6ZVX7 275 aaPredicted RBP12.15□□□□□ -0.46
PDLIM5-210ENST00000508216 MAATS1Q7Z4T9 603 aa12.15□□□□□ -0.46
PDLIM5-210ENST00000508216 SYCP3Q8IZU3 236 aa12.15□□□□□ -0.46
PDLIM5-210ENST00000508216 RASSF8Q8NHQ8 419 aa12.15□□□□□ -0.46
PDLIM5-210ENST00000508216 USP33Q8TEY7 942 aa12.15□□□□□ -0.46
PDLIM5-210ENST00000508216 OPTNQ96CV9 577 aa12.15□□□□□ -0.46
PDLIM5-210ENST00000508216 DDX27Q96GQ7 796 aaKnown RBP12.15□□□□□ -0.46
PDLIM5-210ENST00000508216 BPIFA3Q9BQP9 254 aa12.15□□□□□ -0.46
PDLIM5-210ENST00000508216 UPF3BQ9BZI7 483 aaKnown RBP12.15□□□□□ -0.46
PDLIM5-210ENST00000508216 GOLPH3LQ9H4A5 285 aa12.15□□□□□ -0.46
PDLIM5-210ENST00000508216 CBX8Q9HC52 389 aa12.15□□□□□ -0.46
PDLIM5-210ENST00000508216 TPCN1Q9ULQ1 816 aa12.15□□□□□ -0.46
PDLIM5-210ENST00000508216 NPATQ14207 1427 aa12.15□□□□□ -0.46
PDLIM5-210ENST00000508216 GRIN2DO15399 1336 aa12.15□□□□□ -0.46
PDLIM5-210ENST00000508216 ALDH3A1P30838 453 aa12.15□□□□□ -0.46
PDLIM5-210ENST00000508216 CCNG1P51959 295 aa12.15□□□□□ -0.46
PDLIM5-210ENST00000508216 SKOR1P84550 965 aa12.15□□□□□ -0.46
PDLIM5-210ENST00000508216 FOXK1P85037 733 aa12.15□□□□□ -0.46
PDLIM5-210ENST00000508216 COL19A1Q14993 1142 aa12.15□□□□□ -0.46
PDLIM5-210ENST00000508216 ENOX2Q16206 610 aaKnown RBP12.15□□□□□ -0.46
PDLIM5-210ENST00000508216 MAP3K11Q16584 847 aa12.15□□□□□ -0.46
PDLIM5-210ENST00000508216 KRI1Q8N9T8 703 aaKnown RBP12.15□□□□□ -0.46
PDLIM5-210ENST00000508216 DUSP9Q99956 384 aaKnown RBP12.15□□□□□ -0.46
PDLIM5-210ENST00000508216 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.15□□□□□ -0.469e-7■□□□□ 10.7
PDLIM5-210ENST00000508216 LRRCC1Q9C099 1032 aa12.15□□□□□ -0.46
PDLIM5-210ENST00000508216 RABEP2Q9H5N1 569 aa12.15□□□□□ -0.46
PDLIM5-210ENST00000508216 ZNHIT6Q9NWK9 470 aaKnown RBP12.15□□□□□ -0.46
PDLIM5-210ENST00000508216 PNMA2Q9UL42 364 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms