RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 KIF20BQ96Q89 1820 aa10.95□□□□□ -0.66
PHF3-208ENST00000506783 MED23Q9ULK4 1368 aa10.95□□□□□ -0.66
PHF3-208ENST00000506783 PLEKHA8P1O95397 391 aa10.95□□□□□ -0.66
PHF3-208ENST00000506783 NLRP12P59046 1061 aa10.95□□□□□ -0.66
PHF3-208ENST00000506783 EXOSC10Q01780 885 aaKnown RBP10.95□□□□□ -0.66
PHF3-208ENST00000506783 TSR1Q2NL82 804 aaKnown RBP10.95□□□□□ -0.66
PHF3-208ENST00000506783 ANKRD13CQ8N6S4 541 aa10.95□□□□□ -0.66
PHF3-208ENST00000506783 KRI1Q8N9T8 703 aaKnown RBP10.95□□□□□ -0.66
PHF3-208ENST00000506783 WDR24Q96S15 920 aa10.95□□□□□ -0.66
PHF3-208ENST00000506783 ELP1O95163 1332 aa10.94□□□□□ -0.66
PHF3-208ENST00000506783 IFT172Q9UG01 1749 aa10.94□□□□□ -0.66
PHF3-208ENST00000506783 CYP2D6P10635 497 aa10.94□□□□□ -0.66
PHF3-208ENST00000506783 CCZ1BP86790 482 aa10.94□□□□□ -0.66
PHF3-208ENST00000506783 CCZ1P86791 482 aaPredicted RBP10.94□□□□□ -0.66
PHF3-208ENST00000506783 MKNK2Q9HBH9 465 aa10.94□□□□□ -0.66
PHF3-208ENST00000506783 HOOK1Q9UJC3 728 aaKnown RBP10.94□□□□□ -0.66
PHF3-208ENST00000506783 TRIM37O94972 964 aa10.94□□□□□ -0.66
PHF3-208ENST00000506783 TPM1P09493 284 aa10.94□□□□□ -0.66
PHF3-208ENST00000506783 VEGFAP15692 232 aaPredicted RBP10.94□□□□□ -0.66
PHF3-208ENST00000506783 EIF5P55010 431 aaKnown RBP10.94□□□□□ -0.66
PHF3-208ENST00000506783 FMR1Q06787 632 aaKnown RBP eCLIP10.94□□□□□ -0.663e-11■■□□□ 12.1
PHF3-208ENST00000506783 HEATR3Q7Z4Q2 680 aa10.94□□□□□ -0.66
PHF3-208ENST00000506783 FOXP4Q8IVH2 680 aaPredicted RBP10.94□□□□□ -0.66
PHF3-208ENST00000506783 ACRBPQ8NEB7 543 aa10.94□□□□□ -0.66
PHF3-208ENST00000506783 ZNF274Q96GC6 653 aaPredicted RBP10.94□□□□□ -0.66
PHF3-208ENST00000506783 CDC5LQ99459 802 aaKnown RBP10.94□□□□□ -0.66
PHF3-208ENST00000506783 MCM9Q9NXL9 1143 aa10.94□□□□□ -0.66
PHF3-208ENST00000506783 HPS5Q9UPZ3 1129 aa10.94□□□□□ -0.66
PHF3-208ENST00000506783 PP2D1A8MPX8 630 aa10.94□□□□□ -0.66
PHF3-208ENST00000506783 GNPATO15228 680 aa10.94□□□□□ -0.66
PHF3-208ENST00000506783 GSDMDP57764 484 aa10.94□□□□□ -0.66
PHF3-208ENST00000506783 IGSF22Q8N9C0 903 aa10.94□□□□□ -0.66
PHF3-208ENST00000506783 ARHGAP23Q9P227 1491 aa10.94□□□□□ -0.66
PHF3-208ENST00000506783 POSTNQ15063 836 aa10.93□□□□□ -0.66
PHF3-208ENST00000506783 RASGRP2Q7LDG7 609 aa10.93□□□□□ -0.66
PHF3-208ENST00000506783 RTEL1Q9NZ71 1219 aa10.93□□□□□ -0.66
PHF3-208ENST00000506783 MACROD2A1Z1Q3 448 aa10.93□□□□□ -0.66
PHF3-208ENST00000506783 PDE8BO95263 885 aa10.93□□□□□ -0.66
PHF3-208ENST00000506783 CCDC178Q5BJE1 867 aa10.93□□□□□ -0.66
PHF3-208ENST00000506783 TAF3Q5VWG9 929 aa10.93□□□□□ -0.66
PHF3-208ENST00000506783 ZNF397Q8NF99 534 aaPredicted RBP10.93□□□□□ -0.66
PHF3-208ENST00000506783 LLPHQ9BRT6 129 aaKnown RBP10.93□□□□□ -0.66
PHF3-208ENST00000506783 CLCN6P51797 869 aa10.93□□□□□ -0.66
PHF3-208ENST00000506783 CTSWP56202 376 aa10.93□□□□□ -0.66
PHF3-208ENST00000506783 AXDND1Q5T1B0 1012 aaPredicted RBP10.93□□□□□ -0.66
PHF3-208ENST00000506783 TTC19Q6DKK2 380 aaPredicted RBP10.93□□□□□ -0.66
PHF3-208ENST00000506783 NLRP10Q86W26 655 aa10.93□□□□□ -0.66
PHF3-208ENST00000506783 SMAP1Q8IYB5 467 aaPredicted RBP10.93□□□□□ -0.66
PHF3-208ENST00000506783 SMARCC2Q8TAQ2 1214 aa10.93□□□□□ -0.66
PHF3-208ENST00000506783 AK7Q96M32 723 aa10.93□□□□□ -0.66
PHF3-208ENST00000506783 KANSL2Q9H9L4 492 aa10.93□□□□□ -0.66
PHF3-208ENST00000506783 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.93□□□□□ -0.663e-8■■■■■ 74.5
PHF3-208ENST00000506783 XBP1P17861 261 aa10.92□□□□□ -0.66
PHF3-208ENST00000506783 RFC4P35249 363 aa10.92□□□□□ -0.66
PHF3-208ENST00000506783 PICALMQ13492 652 aa10.92□□□□□ -0.66
PHF3-208ENST00000506783 SLC39A14Q15043 492 aa10.92□□□□□ -0.66
PHF3-208ENST00000506783 FILIP1LQ4L180 1135 aa10.92□□□□□ -0.66
PHF3-208ENST00000506783 NBPF11Q86T75 865 aa10.92□□□□□ -0.66
PHF3-208ENST00000506783 HPS3Q969F9 1004 aa10.92□□□□□ -0.66
PHF3-208ENST00000506783 TMX4Q9H1E5 349 aaPredicted RBP10.92□□□□□ -0.66
PHF3-208ENST00000506783 OGFRQ9NZT2 677 aa10.92□□□□□ -0.66
PHF3-208ENST00000506783 TBC1D7Q9P0N9 293 aa10.92□□□□□ -0.66
PHF3-208ENST00000506783 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.92□□□□□ -0.663e-8■□□□□ 9.7
PHF3-208ENST00000506783 TNKSO95271 1327 aa10.92□□□□□ -0.66
PHF3-208ENST00000506783 UBR1Q8IWV7 1749 aa10.92□□□□□ -0.66
PHF3-208ENST00000506783 TRIM75PA6NK02 468 aa10.92□□□□□ -0.66
PHF3-208ENST00000506783 TERF1P54274 439 aa10.92□□□□□ -0.66
PHF3-208ENST00000506783 SUSD4Q5VX71 490 aa10.92□□□□□ -0.66
PHF3-208ENST00000506783 IQCA1Q86XH1 822 aa10.92□□□□□ -0.66
PHF3-208ENST00000506783 NOSTRINQ8IVI9 506 aa10.92□□□□□ -0.66
PHF3-208ENST00000506783 DYNLL2Q96FJ2 89 aa10.92□□□□□ -0.66
PHF3-208ENST00000506783 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.92□□□□□ -0.66
PHF3-208ENST00000506783 PODXL2Q9NZ53 605 aa10.92□□□□□ -0.66
PHF3-208ENST00000506783 VPS18Q9P253 973 aa10.92□□□□□ -0.66
PHF3-208ENST00000506783 CASP14P31944 242 aa10.92□□□□□ -0.66
PHF3-208ENST00000506783 CATIPQ7Z7H3 387 aa10.92□□□□□ -0.66
PHF3-208ENST00000506783 METTL16Q86W50 562 aaKnown RBP10.92□□□□□ -0.66
PHF3-208ENST00000506783 ZNF654Q8IZM8 581 aa10.92□□□□□ -0.66
PHF3-208ENST00000506783 SLC44A5Q8NCS7 719 aa10.92□□□□□ -0.66
PHF3-208ENST00000506783 ENGASEQ8NFI3 743 aa10.92□□□□□ -0.66
PHF3-208ENST00000506783 CTCFLQ8NI51 663 aaPredicted RBP10.92□□□□□ -0.66
PHF3-208ENST00000506783 MRFAP1L1Q96HT8 127 aa10.92□□□□□ -0.66
PHF3-208ENST00000506783 CCNL1Q9UK58 526 aaPredicted RBP10.92□□□□□ -0.66
PHF3-208ENST00000506783 REREQ9P2R6 1566 aa10.91□□□□□ -0.66
PHF3-208ENST00000506783 PEAK1Q9H792 1746 aa10.91□□□□□ -0.66
PHF3-208ENST00000506783 MAGEB6P1A0A0J9YX57 407 aa10.91□□□□□ -0.66
PHF3-208ENST00000506783 SRGAP2O75044 1071 aa10.91□□□□□ -0.66
PHF3-208ENST00000506783 ADD2P35612 726 aa10.91□□□□□ -0.66
PHF3-208ENST00000506783 AKNAD1Q5T1N1 836 aa10.91□□□□□ -0.66
PHF3-208ENST00000506783 KRBA2Q6ZNG9 492 aa10.91□□□□□ -0.66
PHF3-208ENST00000506783 ZBTB38Q8NAP3 1195 aaPredicted RBP10.91□□□□□ -0.66
PHF3-208ENST00000506783 PPP2R2CQ9Y2T4 447 aa10.91□□□□□ -0.66
PHF3-208ENST00000506783 TNS3Q68CZ2 1445 aa10.91□□□□□ -0.66
PHF3-208ENST00000506783 SLIT1O75093 1534 aa10.91□□□□□ -0.66
PHF3-208ENST00000506783 SOS2Q07890 1332 aaPredicted RBP10.91□□□□□ -0.66
PHF3-208ENST00000506783 TRIM49BA6NDI0 452 aa10.91□□□□□ -0.66
PHF3-208ENST00000506783 CBFA2T2O43439 604 aa10.91□□□□□ -0.66
PHF3-208ENST00000506783 MYO1BO43795 1136 aa10.91□□□□□ -0.66
PHF3-208ENST00000506783 ZFYP08048 801 aaPredicted RBP10.91□□□□□ -0.66
PHF3-208ENST00000506783 ETF1P62495 437 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms