RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 MYH1P12882 1939 aa18.88■□□□□ 0.61
CLDND1-211ENST00000506575 MAGEB6P1A0A0J9YX57 407 aa18.88■□□□□ 0.61
CLDND1-211ENST00000506575 BTBD19C9JJ37 291 aa18.88■□□□□ 0.61
CLDND1-211ENST00000506575 HLA-DOAP06340 250 aa18.88■□□□□ 0.61
CLDND1-211ENST00000506575 PDE6AP16499 860 aa18.88■□□□□ 0.61
CLDND1-211ENST00000506575 PTPRAP18433 802 aa18.88■□□□□ 0.61
CLDND1-211ENST00000506575 CRACR2BQ8N4Y2 399 aaPredicted RBP18.88■□□□□ 0.61
CLDND1-211ENST00000506575 HAUS7Q99871 368 aa18.88■□□□□ 0.61
CLDND1-211ENST00000506575 ZCCHC17Q9NP64 241 aaKnown RBP18.88■□□□□ 0.61
CLDND1-211ENST00000506575 SAP30BPQ9UHR5 308 aaKnown RBP18.88■□□□□ 0.61
CLDND1-211ENST00000506575 CCDC85CA6NKD9 419 aa18.87■□□□□ 0.61
CLDND1-211ENST00000506575 CXCL11O14625 94 aa18.87■□□□□ 0.61
CLDND1-211ENST00000506575 PKN2Q16513 984 aaKnown RBP18.87■□□□□ 0.61
CLDND1-211ENST00000506575 EDC3Q96F86 508 aaKnown RBP18.87■□□□□ 0.61
CLDND1-211ENST00000506575 ATAD5Q96QE3 1844 aa18.87■□□□□ 0.61
CLDND1-211ENST00000506575 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.87■□□□□ 0.61
CLDND1-211ENST00000506575 ZNF532Q9HCE3 1301 aa18.87■□□□□ 0.61
CLDND1-211ENST00000506575 ECHDC1Q9NTX5 307 aa18.87■□□□□ 0.61
CLDND1-211ENST00000506575 PALD1Q9ULE6 856 aa18.87■□□□□ 0.61
CLDND1-211ENST00000506575 ANKRD23Q86SG2 305 aa18.86■□□□□ 0.61
CLDND1-211ENST00000506575 FOXP4Q8IVH2 680 aaPredicted RBP18.86■□□□□ 0.61
CLDND1-211ENST00000506575 ERO1AQ96HE7 468 aa18.86■□□□□ 0.61
CLDND1-211ENST00000506575 MYH7P12883 1935 aa18.86■□□□□ 0.61
CLDND1-211ENST00000506575 SIPA1L1O43166 1804 aa18.86■□□□□ 0.61
CLDND1-211ENST00000506575 CAP2P40123 477 aa18.85■□□□□ 0.61
CLDND1-211ENST00000506575 SP3Q02447 781 aa18.85■□□□□ 0.61
CLDND1-211ENST00000506575 FASTKD5Q7L8L6 764 aaKnown RBP18.85■□□□□ 0.61
CLDND1-211ENST00000506575 RIOK1Q9BRS2 568 aaKnown RBP18.85■□□□□ 0.61
CLDND1-211ENST00000506575 CRNKL1Q9BZJ0 848 aaKnown RBP18.85■□□□□ 0.61
CLDND1-211ENST00000506575 ZBTB47Q9UFB7 747 aaPredicted RBP18.85■□□□□ 0.61
CLDND1-211ENST00000506575 AFG3L2Q9Y4W6 797 aa18.85■□□□□ 0.61
CLDND1-211ENST00000506575 PHIPQ8WWQ0 1821 aa18.85■□□□□ 0.61
CLDND1-211ENST00000506575 PDHXO00330 501 aa18.84■□□□□ 0.61
CLDND1-211ENST00000506575 SLC4A8Q2Y0W8 1093 aa18.84■□□□□ 0.61
CLDND1-211ENST00000506575 ZSCAN25Q6NSZ9 544 aa18.84■□□□□ 0.61
CLDND1-211ENST00000506575 GADL1Q6ZQY3 521 aa18.84■□□□□ 0.61
CLDND1-211ENST00000506575 PTPRFP10586 1907 aa18.83■□□□□ 0.6
CLDND1-211ENST00000506575 A0A0G2JLL6 359 aaPredicted RBP18.83■□□□□ 0.6
CLDND1-211ENST00000506575 TCRBV5S4A2TA0A5A2 114 aa18.83■□□□□ 0.6
CLDND1-211ENST00000506575 TRIM75PA6NK02 468 aa18.83■□□□□ 0.6
CLDND1-211ENST00000506575 TLR2O60603 784 aa18.83■□□□□ 0.6
CLDND1-211ENST00000506575 AAMPQ13685 434 aa18.83■□□□□ 0.6
CLDND1-211ENST00000506575 PRRT2Q7Z6L0 340 aaPredicted RBP18.83■□□□□ 0.6
CLDND1-211ENST00000506575 TTC6Q86TZ1 520 aa18.83■□□□□ 0.6
CLDND1-211ENST00000506575 CD99L2Q8TCZ2 262 aa18.83■□□□□ 0.6
CLDND1-211ENST00000506575 TBC1D2Q9BYX2 928 aa18.83■□□□□ 0.6
CLDND1-211ENST00000506575 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.83■□□□□ 0.6
CLDND1-211ENST00000506575 NAV1Q8NEY1 1877 aa18.83■□□□□ 0.6
CLDND1-211ENST00000506575 ADD2P35612 726 aa18.82■□□□□ 0.6
CLDND1-211ENST00000506575 MOGSQ13724 837 aa18.82■□□□□ 0.6
CLDND1-211ENST00000506575 ARHGEF6Q15052 776 aa18.82■□□□□ 0.6
CLDND1-211ENST00000506575 CCDC84Q86UT8 332 aaPredicted RBP18.82■□□□□ 0.6
CLDND1-211ENST00000506575 TRIM17Q9Y577 477 aa18.82■□□□□ 0.6
CLDND1-211ENST00000506575 USP17L5A8MUK1 530 aa18.81■□□□□ 0.6
CLDND1-211ENST00000506575 ASNSP08243 561 aa18.81■□□□□ 0.6
CLDND1-211ENST00000506575 FBXO46Q6PJ61 603 aaPredicted RBP18.81■□□□□ 0.6
CLDND1-211ENST00000506575 METTL16Q86W50 562 aaKnown RBP18.81■□□□□ 0.6
CLDND1-211ENST00000506575 LCORLQ8N3X6 602 aa18.81■□□□□ 0.6
CLDND1-211ENST00000506575 PARK7Q99497 189 aaKnown RBP18.81■□□□□ 0.6
CLDND1-211ENST00000506575 DNAJC18Q9H819 358 aa18.81■□□□□ 0.6
CLDND1-211ENST00000506575 EFCC1Q9HA90 598 aa18.81■□□□□ 0.6
CLDND1-211ENST00000506575 AS3MTQ9HBK9 375 aa18.81■□□□□ 0.6
CLDND1-211ENST00000506575 ERC2O15083 957 aa18.8■□□□□ 0.6
CLDND1-211ENST00000506575 POLR3DP05423 398 aaPredicted RBP18.8■□□□□ 0.6
CLDND1-211ENST00000506575 RRP1BQ14684 758 aaKnown RBP18.8■□□□□ 0.6
CLDND1-211ENST00000506575 KIF22Q14807 665 aa18.8■□□□□ 0.6
CLDND1-211ENST00000506575 UBE3CQ15386 1083 aa18.8■□□□□ 0.6
CLDND1-211ENST00000506575 TSHZ3Q63HK5 1081 aa18.8■□□□□ 0.6
CLDND1-211ENST00000506575 GPAT2Q6NUI2 795 aa18.8■□□□□ 0.6
CLDND1-211ENST00000506575 OTOP1Q7RTM1 612 aa18.8■□□□□ 0.6
CLDND1-211ENST00000506575 ZNF280CQ8ND82 737 aa18.8■□□□□ 0.6
CLDND1-211ENST00000506575 EHD4Q9H223 541 aa18.8■□□□□ 0.6
CLDND1-211ENST00000506575 ARMT1Q9H993 441 aa18.8■□□□□ 0.6
CLDND1-211ENST00000506575 GINM1Q9NU53 330 aa18.8■□□□□ 0.6
CLDND1-211ENST00000506575 SERPINB13Q9UIV8 391 aa18.8■□□□□ 0.6
CLDND1-211ENST00000506575 HPS5Q9UPZ3 1129 aa18.8■□□□□ 0.6
CLDND1-211ENST00000506575 TTC41PQ6P2S7 1318 aa18.79■□□□□ 0.6
CLDND1-211ENST00000506575 MBD4O95243 580 aa18.79■□□□□ 0.6
CLDND1-211ENST00000506575 GDF11O95390 407 aa18.79■□□□□ 0.6
CLDND1-211ENST00000506575 SPP2Q13103 211 aa18.79■□□□□ 0.6
CLDND1-211ENST00000506575 HDAC1Q13547 482 aaPredicted RBP18.79■□□□□ 0.6
CLDND1-211ENST00000506575 ANKRD45Q5TZF3 282 aa18.79■□□□□ 0.6
CLDND1-211ENST00000506575 GCC1Q96CN9 775 aa18.79■□□□□ 0.6
CLDND1-211ENST00000506575 MCM9Q9NXL9 1143 aa18.79■□□□□ 0.6
CLDND1-211ENST00000506575 DDX60LQ5H9U9 1706 aaKnown RBP18.79■□□□□ 0.6
CLDND1-211ENST00000506575 SLFNL1Q499Z3 407 aa18.78■□□□□ 0.6
CLDND1-211ENST00000506575 SDR42E1Q8WUS8 393 aa18.78■□□□□ 0.6
CLDND1-211ENST00000506575 CPA4Q9UI42 421 aa18.78■□□□□ 0.6
CLDND1-211ENST00000506575 SLC45A1Q9Y2W3 748 aa18.78■□□□□ 0.6
CLDND1-211ENST00000506575 HMGCS2P54868 508 aa18.77■□□□□ 0.6
CLDND1-211ENST00000506575 C17orf99Q6UX52 265 aa18.77■□□□□ 0.6
CLDND1-211ENST00000506575 KBTBD3Q8NAB2 608 aa18.77■□□□□ 0.6
CLDND1-211ENST00000506575 PROCA1Q8NCQ7 364 aaPredicted RBP18.77■□□□□ 0.6
CLDND1-211ENST00000506575 DDRGK1Q96HY6 314 aa18.77■□□□□ 0.6
CLDND1-211ENST00000506575 DCP1AQ9NPI6 582 aaPredicted RBP18.77■□□□□ 0.6
CLDND1-211ENST00000506575 ZBTB21Q9ULJ3 1066 aa18.77■□□□□ 0.6
CLDND1-211ENST00000506575 AGTPBP1Q9UPW5 1226 aa18.77■□□□□ 0.6
CLDND1-211ENST00000506575 LOC285556D6RIA3 1793 aa18.76■□□□□ 0.59
CLDND1-211ENST00000506575 GLRX3O76003 335 aaKnown RBP18.76■□□□□ 0.59
CLDND1-211ENST00000506575 CYP2C8P10632 490 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms