RNA–Protein interactions for RNA: ENST00000505337.5

DHFR-203, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene DHFR, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-203ENST00000505337 RGS22Q8NE09 1264 aa28.79■■■□□ 2.2
DHFR-203ENST00000505337 DCP1AQ9NPI6 582 aaPredicted RBP28.79■■■□□ 2.2
DHFR-203ENST00000505337 ATP8A2Q9NTI2 1148 aa28.79■■■□□ 2.2
DHFR-203ENST00000505337 ORC3Q9UBD5 711 aaPredicted RBP28.79■■■□□ 2.2
DHFR-203ENST00000505337 POLLQ9UGP5 575 aa28.79■■■□□ 2.2
DHFR-203ENST00000505337 SMIM22K7EJ46 135 aa28.78■■■□□ 2.2
DHFR-203ENST00000505337 SART3Q15020 963 aaKnown RBP28.78■■■□□ 2.2
DHFR-203ENST00000505337 MICU3Q86XE3 530 aa28.78■■■□□ 2.2
DHFR-203ENST00000505337 SP8Q8IXZ3 490 aa28.78■■■□□ 2.2
DHFR-203ENST00000505337 SYCE3A1L190 88 aa28.77■■■□□ 2.2
DHFR-203ENST00000505337 FOSBP53539 338 aa28.77■■■□□ 2.2
DHFR-203ENST00000505337 LRSAM1Q6UWE0 723 aa28.77■■■□□ 2.2
DHFR-203ENST00000505337 NFXL1Q6ZNB6 911 aa28.77■■■□□ 2.2
DHFR-203ENST00000505337 PANK2Q9BZ23 570 aa28.77■■■□□ 2.2
DHFR-203ENST00000505337 TOMM22Q9NS69 142 aa28.77■■■□□ 2.2
DHFR-203ENST00000505337 CDC27P30260 824 aa28.77■■■□□ 2.2
DHFR-203ENST00000505337 ESR2Q92731 530 aa28.77■■■□□ 2.2
DHFR-203ENST00000505337 ATP6V0A2Q9Y487 856 aa28.77■■■□□ 2.2
DHFR-203ENST00000505337 CYP2D7A0A087X1C5 515 aa28.76■■■□□ 2.19
DHFR-203ENST00000505337 CDKL5O76039 1030 aa28.76■■■□□ 2.19
DHFR-203ENST00000505337 GRIK5Q16478 980 aa28.76■■■□□ 2.19
DHFR-203ENST00000505337 CC2D2BQ6DHV5 1058 aa28.76■■■□□ 2.19
DHFR-203ENST00000505337 LEO1Q8WVC0 666 aaPredicted RBP28.76■■■□□ 2.19
DHFR-203ENST00000505337 FAM217BQ9NTX9 383 aaPredicted RBP28.76■■■□□ 2.19
DHFR-203ENST00000505337 MYH1P12882 1939 aa28.76■■■□□ 2.19
DHFR-203ENST00000505337 ZC3H4Q9UPT8 1303 aaKnown RBP28.76■■■□□ 2.19
DHFR-203ENST00000505337 CCDC69A6NI79 296 aa28.75■■■□□ 2.19
DHFR-203ENST00000505337 GOLGA8AA7E2F4 631 aa28.75■■■□□ 2.19
DHFR-203ENST00000505337 RXRAP19793 462 aa28.75■■■□□ 2.19
DHFR-203ENST00000505337 ADD1P35611 737 aaKnown RBP28.75■■■□□ 2.19
DHFR-203ENST00000505337 RCAN1P53805 252 aa28.75■■■□□ 2.19
DHFR-203ENST00000505337 GSTO1P78417 241 aa28.75■■■□□ 2.19
DHFR-203ENST00000505337 WTAPQ15007 396 aa28.75■■■□□ 2.19
DHFR-203ENST00000505337 NTRK3Q16288 839 aa28.75■■■□□ 2.19
DHFR-203ENST00000505337 ARPP21Q9UBL0 812 aaPredicted RBP28.75■■■□□ 2.19
DHFR-203ENST00000505337 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.75■■■□□ 2.192e-8■■■□□ 17.8
DHFR-203ENST00000505337 SLC12A7Q9Y666 1083 aa28.75■■■□□ 2.19
DHFR-203ENST00000505337 ZNF646O15015 1829 aaPredicted RBP28.75■■■□□ 2.19
DHFR-203ENST00000505337 SBK1Q52WX2 424 aa28.74■■■□□ 2.19
DHFR-203ENST00000505337 CCDC183Q5T5S1 534 aa28.74■■■□□ 2.19
DHFR-203ENST00000505337 STK11IPQ8N1F8 1099 aa28.74■■■□□ 2.19
DHFR-203ENST00000505337 SPATA32Q96LK8 384 aa28.74■■■□□ 2.19
DHFR-203ENST00000505337 PSMD1Q99460 953 aa28.74■■■□□ 2.19
DHFR-203ENST00000505337 ZNF277Q9NRM2 450 aaPredicted RBP28.74■■■□□ 2.19
DHFR-203ENST00000505337 USP17L12C9JPN9 530 aa28.74■■■□□ 2.19
DHFR-203ENST00000505337 USP17L21D6R901 530 aa28.74■■■□□ 2.19
DHFR-203ENST00000505337 SEC23AQ15436 765 aa28.74■■■□□ 2.19
DHFR-203ENST00000505337 FBXO18Q8NFZ0 1043 aa28.74■■■□□ 2.19
DHFR-203ENST00000505337 C8orf76Q96K31 380 aa28.74■■■□□ 2.19
DHFR-203ENST00000505337 ZKSCAN3Q9BRR0 538 aa28.74■■■□□ 2.19
DHFR-203ENST00000505337 MYL10Q9BUA6 226 aa28.74■■■□□ 2.19
DHFR-203ENST00000505337 DICER1Q9UPY3 1922 aaKnown RBP28.74■■■□□ 2.19
DHFR-203ENST00000505337 STK36Q9NRP7 1315 aa28.73■■■□□ 2.19
DHFR-203ENST00000505337 GUCY1B3Q02153 619 aa28.73■■■□□ 2.19
DHFR-203ENST00000505337 CPLX2Q6PUV4 134 aaKnown RBP28.73■■■□□ 2.19
DHFR-203ENST00000505337 TMTC2Q8N394 836 aa28.73■■■□□ 2.19
DHFR-203ENST00000505337 TFIP11Q9UBB9 837 aaKnown RBP28.73■■■□□ 2.19
DHFR-203ENST00000505337 MROH7-TTC4A0A0A0MT08 1334 aa28.73■■■□□ 2.19
DHFR-203ENST00000505337 ERICH2A1L162 156 aa28.72■■■□□ 2.19
DHFR-203ENST00000505337 ORC4O43929 436 aa28.72■■■□□ 2.19
DHFR-203ENST00000505337 ATL3Q6DD88 541 aa28.72■■■□□ 2.19
DHFR-203ENST00000505337 UBAC1Q9BSL1 405 aa28.72■■■□□ 2.19
DHFR-203ENST00000505337 MKRN1Q9UHC7 482 aaKnown RBP28.72■■■□□ 2.19
DHFR-203ENST00000505337 TNKSO95271 1327 aa28.72■■■□□ 2.19
DHFR-203ENST00000505337 PPP4CP60510 307 aa28.72■■■□□ 2.19
DHFR-203ENST00000505337 CFAP45Q9UL16 551 aa28.72■■■□□ 2.19
DHFR-203ENST00000505337 ROBO3Q96MS0 1386 aa28.71■■■□□ 2.19
DHFR-203ENST00000505337 RANBP6O60518 1105 aaKnown RBP28.71■■■□□ 2.19
DHFR-203ENST00000505337 DIXDC1Q155Q3 683 aa28.71■■■□□ 2.19
DHFR-203ENST00000505337 GRIPAP1Q4V328 841 aa28.71■■■□□ 2.19
DHFR-203ENST00000505337 FAM205AQ6ZU69 1335 aa28.71■■■□□ 2.19
DHFR-203ENST00000505337 CCDC144CPQ8IYA2 1237 aa28.7■■■□□ 2.19
DHFR-203ENST00000505337 RTFDC1Q9BY42 306 aaPredicted RBP28.7■■■□□ 2.19
DHFR-203ENST00000505337 NMRK2Q9NPI5 230 aa28.7■■■□□ 2.19
DHFR-203ENST00000505337 C6orf229H3BNL8 230 aa28.69■■■□□ 2.18
DHFR-203ENST00000505337 KIF3CO14782 793 aa28.69■■■□□ 2.18
DHFR-203ENST00000505337 EVX2Q03828 476 aa28.69■■■□□ 2.18
DHFR-203ENST00000505337 SYNE3Q6ZMZ3 975 aa28.69■■■□□ 2.18
DHFR-203ENST00000505337 LDHCP07864 332 aa28.69■■■□□ 2.18
DHFR-203ENST00000505337 ZNF654Q8IZM8 581 aa28.69■■■□□ 2.18
DHFR-203ENST00000505337 SH3RF3Q8TEJ3 882 aaPredicted RBP28.69■■■□□ 2.18
DHFR-203ENST00000505337 ADAMTSL1Q8N6G6 1762 aa28.68■■■□□ 2.18
DHFR-203ENST00000505337 GLTPD2A6NH11 291 aa28.68■■■□□ 2.18
DHFR-203ENST00000505337 IFNAR1P17181 557 aa28.68■■■□□ 2.18
DHFR-203ENST00000505337 IARSP41252 1262 aaKnown RBP28.68■■■□□ 2.18
DHFR-203ENST00000505337 OTUD7BQ6GQQ9 843 aa28.68■■■□□ 2.18
DHFR-203ENST00000505337 CERS3Q8IU89 383 aa28.68■■■□□ 2.18
DHFR-203ENST00000505337 ENAHQ8N8S7 591 aaPredicted RBP28.68■■■□□ 2.18
DHFR-203ENST00000505337 TBC1D22AQ8WUA7 517 aa28.68■■■□□ 2.18
DHFR-203ENST00000505337 PHKBQ93100 1093 aa28.68■■■□□ 2.18
DHFR-203ENST00000505337 ZSCAN10Q96SZ4 725 aaPredicted RBP28.68■■■□□ 2.18
DHFR-203ENST00000505337 BAG3O95817 575 aa28.67■■■□□ 2.18
DHFR-203ENST00000505337 CYP2D6P10635 497 aa28.67■■■□□ 2.18
DHFR-203ENST00000505337 RTN1Q16799 776 aa28.67■■■□□ 2.18
DHFR-203ENST00000505337 ALG1Q9BT22 464 aa28.67■■■□□ 2.18
DHFR-203ENST00000505337 RBSNQ9H1K0 784 aa28.67■■■□□ 2.18
DHFR-203ENST00000505337 PGBD1Q96JS3 809 aa28.66■■■□□ 2.18
DHFR-203ENST00000505337 ZNF396Q96N95 335 aaPredicted RBP28.66■■■□□ 2.18
DHFR-203ENST00000505337 USP28Q96RU2 1077 aa28.66■■■□□ 2.18
DHFR-203ENST00000505337 COA1Q9GZY4 146 aa28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms