RNA–Protein interactions for RNA: ENST00000505030.5

LINC00461-204, long intergenic non-protein coding RNA 461, humanhuman

TSL 1 (best)

Gene LINC00461, Length 3,558 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-204ENST00000505030 USP17L3A6NCW0 530 aa8.32□□□□□ -1.08
LINC00461-204ENST00000505030 USP17L4A6NCW7 530 aa8.32□□□□□ -1.08
LINC00461-204ENST00000505030 CCDC69A6NI79 296 aa8.32□□□□□ -1.08
LINC00461-204ENST00000505030 TOB2Q14106 344 aaPredicted RBP8.32□□□□□ -1.08
LINC00461-204ENST00000505030 MFSD14BQ5SR56 506 aa8.32□□□□□ -1.08
LINC00461-204ENST00000505030 USP17L1Q7RTZ2 530 aa8.32□□□□□ -1.08
LINC00461-204ENST00000505030 ZSCAN30Q86W11 494 aa8.32□□□□□ -1.08
LINC00461-204ENST00000505030 FAM184AQ8NB25 1140 aa8.32□□□□□ -1.08
LINC00461-204ENST00000505030 TEKT1Q969V4 418 aa8.32□□□□□ -1.08
LINC00461-204ENST00000505030 SERPINA10Q9UK55 444 aa8.32□□□□□ -1.08
LINC00461-204ENST00000505030 FOCADQ5VW36 1801 aa8.32□□□□□ -1.08
LINC00461-204ENST00000505030 DDAH1O94760 285 aa8.32□□□□□ -1.08
LINC00461-204ENST00000505030 GNAQP50148 359 aa8.32□□□□□ -1.08
LINC00461-204ENST00000505030 SMARCC2Q8TAQ2 1214 aa8.32□□□□□ -1.08
LINC00461-204ENST00000505030 ANKS1AQ92625 1134 aa8.32□□□□□ -1.08
LINC00461-204ENST00000505030 KLRG1Q96E93 195 aa8.32□□□□□ -1.08
LINC00461-204ENST00000505030 LZTS2Q9BRK4 669 aa8.32□□□□□ -1.08
LINC00461-204ENST00000505030 DHX36Q9H2U1 1008 aaKnown RBP8.32□□□□□ -1.08
LINC00461-204ENST00000505030 SH2B2O14492 632 aaPredicted RBP8.31□□□□□ -1.08
LINC00461-204ENST00000505030 MBD3O95983 291 aa8.31□□□□□ -1.08
LINC00461-204ENST00000505030 TTLL5Q6EMB2 1281 aa8.31□□□□□ -1.08
LINC00461-204ENST00000505030 JDP2Q8WYK2 163 aa8.31□□□□□ -1.08
LINC00461-204ENST00000505030 ZHX1Q9UKY1 873 aaPredicted RBP8.31□□□□□ -1.08
LINC00461-204ENST00000505030 MYO5AQ9Y4I1 1855 aaKnown RBP8.31□□□□□ -1.08
LINC00461-204ENST00000505030 SYCE3A1L190 88 aa8.31□□□□□ -1.08
LINC00461-204ENST00000505030 AP5Z1O43299 807 aa8.31□□□□□ -1.08
LINC00461-204ENST00000505030 ZSCAN22P10073 491 aaPredicted RBP8.31□□□□□ -1.08
LINC00461-204ENST00000505030 TEX2Q8IWB9 1127 aa8.31□□□□□ -1.08
LINC00461-204ENST00000505030 SYNPO2Q9UMS6 1093 aa8.31□□□□□ -1.08
LINC00461-204ENST00000505030 CPLX1O14810 134 aa8.31□□□□□ -1.08
LINC00461-204ENST00000505030 STX6O43752 255 aa8.31□□□□□ -1.08
LINC00461-204ENST00000505030 LARGE1O95461 756 aa8.31□□□□□ -1.08
LINC00461-204ENST00000505030 WTAPQ15007 396 aa8.31□□□□□ -1.08
LINC00461-204ENST00000505030 HS1BP3Q53T59 392 aa8.31□□□□□ -1.08
LINC00461-204ENST00000505030 CCDC24Q8N4L8 307 aa8.31□□□□□ -1.08
LINC00461-204ENST00000505030 SNED1Q8TER0 1413 aa8.31□□□□□ -1.08
LINC00461-204ENST00000505030 FUCA2Q9BTY2 467 aa8.31□□□□□ -1.08
LINC00461-204ENST00000505030 RRAGCQ9HB90 399 aa8.31□□□□□ -1.08
LINC00461-204ENST00000505030 TPCN1Q9ULQ1 816 aa8.31□□□□□ -1.08
LINC00461-204ENST00000505030 MYH2Q9UKX2 1941 aa8.3□□□□□ -1.08
LINC00461-204ENST00000505030 FOXP2O15409 715 aa8.3□□□□□ -1.08
LINC00461-204ENST00000505030 HLA-DOAP06340 250 aa8.3□□□□□ -1.08
LINC00461-204ENST00000505030 XBP1P17861 261 aa8.3□□□□□ -1.08
LINC00461-204ENST00000505030 RPS12P25398 132 aaKnown RBP8.3□□□□□ -1.08
LINC00461-204ENST00000505030 TNIP1Q15025 636 aa8.3□□□□□ -1.08
LINC00461-204ENST00000505030 ME3Q16798 604 aa8.3□□□□□ -1.08
LINC00461-204ENST00000505030 TMEM67Q5HYA8 995 aa8.3□□□□□ -1.08
LINC00461-204ENST00000505030 FKBP1CQ5VVH2 108 aa8.3□□□□□ -1.08
LINC00461-204ENST00000505030 DGKHQ86XP1 1220 aa8.3□□□□□ -1.08
LINC00461-204ENST00000505030 TMEM87AQ8NBN3 555 aa8.3□□□□□ -1.08
LINC00461-204ENST00000505030 AGBL3Q8NEM8 1001 aa8.3□□□□□ -1.08
LINC00461-204ENST00000505030 BRF1Q92994 677 aa8.3□□□□□ -1.08
LINC00461-204ENST00000505030 SYAP1Q96A49 352 aaPredicted RBP8.3□□□□□ -1.08
LINC00461-204ENST00000505030 ZDHHC15Q96MV8 337 aa8.3□□□□□ -1.08
LINC00461-204ENST00000505030 EHD4Q9H223 541 aa8.3□□□□□ -1.08
LINC00461-204ENST00000505030 DCP1AQ9NPI6 582 aaPredicted RBP8.3□□□□□ -1.08
LINC00461-204ENST00000505030 IFIT3O14879 490 aaKnown RBP8.3□□□□□ -1.08
LINC00461-204ENST00000505030 SMARCA1P28370 1054 aa8.3□□□□□ -1.08
LINC00461-204ENST00000505030 KIF5BP33176 963 aa8.3□□□□□ -1.08
LINC00461-204ENST00000505030 ECE1P42892 770 aa8.3□□□□□ -1.08
LINC00461-204ENST00000505030 C12orf60Q5U649 245 aa8.3□□□□□ -1.08
LINC00461-204ENST00000505030 STOX1Q6ZVD7 989 aa8.3□□□□□ -1.08
LINC00461-204ENST00000505030 CATIPQ7Z7H3 387 aa8.3□□□□□ -1.08
LINC00461-204ENST00000505030 TEX11Q8IYF3 940 aa8.3□□□□□ -1.08
LINC00461-204ENST00000505030 TRIM22Q8IYM9 498 aa8.3□□□□□ -1.08
LINC00461-204ENST00000505030 EPB41L4AQ9HCS5 686 aaPredicted RBP8.3□□□□□ -1.08
LINC00461-204ENST00000505030 NMRK2Q9NPI5 230 aa8.3□□□□□ -1.08
LINC00461-204ENST00000505030 GINM1Q9NU53 330 aa8.3□□□□□ -1.08
LINC00461-204ENST00000505030 TMOD2Q9NZR1 351 aa8.3□□□□□ -1.08
LINC00461-204ENST00000505030 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.3□□□□□ -1.08
LINC00461-204ENST00000505030 SLC12A7Q9Y666 1083 aa8.3□□□□□ -1.08
LINC00461-204ENST00000505030 ZBTB43O43298 467 aa8.3□□□□□ -1.08
LINC00461-204ENST00000505030 GJB2P29033 226 aa8.3□□□□□ -1.08
LINC00461-204ENST00000505030 PDIA3P30101 505 aaKnown RBP8.3□□□□□ -1.08
LINC00461-204ENST00000505030 NFXL1Q6ZNB6 911 aa8.3□□□□□ -1.08
LINC00461-204ENST00000505030 CCDC83Q8IWF9 413 aa8.3□□□□□ -1.08
LINC00461-204ENST00000505030 CCDC17Q96LX7 622 aa8.3□□□□□ -1.08
LINC00461-204ENST00000505030 ECE2O60344 883 aa8.29□□□□□ -1.08
LINC00461-204ENST00000505030 DTNBO60941 627 aa8.29□□□□□ -1.08
LINC00461-204ENST00000505030 ENTPD3O75355 529 aa8.29□□□□□ -1.08
LINC00461-204ENST00000505030 BTDP43251 543 aa8.29□□□□□ -1.08
LINC00461-204ENST00000505030 GTF2IP78347 998 aa8.29□□□□□ -1.08
LINC00461-204ENST00000505030 LARP1BQ659C4 914 aaKnown RBP8.29□□□□□ -1.08
LINC00461-204ENST00000505030 CTR9Q6PD62 1173 aa8.29□□□□□ -1.08
LINC00461-204ENST00000505030 MTMR14Q8NCE2 650 aa8.29□□□□□ -1.08
LINC00461-204ENST00000505030 ZNF396Q96N95 335 aaPredicted RBP8.29□□□□□ -1.08
LINC00461-204ENST00000505030 DDX60LQ5H9U9 1706 aaKnown RBP8.29□□□□□ -1.08
LINC00461-204ENST00000505030 SLX4Q8IY92 1834 aa8.29□□□□□ -1.08
LINC00461-204ENST00000505030 POLR3DP05423 398 aaPredicted RBP8.29□□□□□ -1.08
LINC00461-204ENST00000505030 KLRK1P26718 216 aa8.29□□□□□ -1.08
LINC00461-204ENST00000505030 PRDX5P30044 214 aa8.29□□□□□ -1.08
LINC00461-204ENST00000505030 CTCFP49711 727 aaPredicted RBP8.29□□□□□ -1.08
LINC00461-204ENST00000505030 TXNRD3Q86VQ6 643 aa8.29□□□□□ -1.08
LINC00461-204ENST00000505030 NIM1KQ8IY84 436 aa8.29□□□□□ -1.08
LINC00461-204ENST00000505030 ZNF444Q8N0Y2 327 aaPredicted RBP8.29□□□□□ -1.08
LINC00461-204ENST00000505030 CFAP45Q9UL16 551 aa8.29□□□□□ -1.08
LINC00461-204ENST00000505030 PLIN4Q96Q06 1357 aa8.29□□□□□ -1.08
LINC00461-204ENST00000505030 KLF18A0A0U1RQI7 1052 aa8.28□□□□□ -1.08
LINC00461-204ENST00000505030 SNAP23O00161 211 aa8.28□□□□□ -1.08
LINC00461-204ENST00000505030 LETM1O95202 739 aaPredicted RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms