RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 FLT1P17948 1338 aa30.85■■■□□ 2.53
PVT1-201ENST00000504719 RGS19P49795 217 aa30.85■■■□□ 2.53
PVT1-201ENST00000504719 AFG3L2Q9Y4W6 797 aa30.85■■■□□ 2.53
PVT1-201ENST00000504719 TLR2O60603 784 aa30.84■■■□□ 2.53
PVT1-201ENST00000504719 TTF1Q15361 905 aaPredicted RBP30.84■■■□□ 2.53
PVT1-201ENST00000504719 BCL11AQ9H165 835 aa30.84■■■□□ 2.53
PVT1-201ENST00000504719 PI4KBQ9UBF8 816 aa30.84■■■□□ 2.53
PVT1-201ENST00000504719 HERC5Q9UII4 1024 aaKnown RBP30.84■■■□□ 2.53
PVT1-201ENST00000504719 MYH1P12882 1939 aa30.83■■■□□ 2.53
PVT1-201ENST00000504719 CAP1Q01518 475 aa30.82■■■□□ 2.52
PVT1-201ENST00000504719 CERS3Q8IU89 383 aa30.82■■■□□ 2.52
PVT1-201ENST00000504719 MIGA1Q8NAN2 632 aa30.82■■■□□ 2.52
PVT1-201ENST00000504719 A0A0G2JLL6 359 aaPredicted RBP30.81■■■□□ 2.52
PVT1-201ENST00000504719 PDHXO00330 501 aa30.81■■■□□ 2.52
PVT1-201ENST00000504719 GPAT2Q6NUI2 795 aa30.81■■■□□ 2.52
PVT1-201ENST00000504719 PRRT2Q7Z6L0 340 aaPredicted RBP30.81■■■□□ 2.52
PVT1-201ENST00000504719 LRRCC1Q9C099 1032 aa30.81■■■□□ 2.52
PVT1-201ENST00000504719 EFCC1Q9HA90 598 aa30.81■■■□□ 2.52
PVT1-201ENST00000504719 FRMD4AQ9P2Q2 1039 aaPredicted RBP30.81■■■□□ 2.52
PVT1-201ENST00000504719 RRP1BQ14684 758 aaKnown RBP30.8■■■□□ 2.52
PVT1-201ENST00000504719 DNAJC2Q99543 621 aaKnown RBP30.8■■■□□ 2.52
PVT1-201ENST00000504719 PCDHB15Q9Y5E8 787 aa30.8■■■□□ 2.52
PVT1-201ENST00000504719 GOLIM4O00461 696 aa30.79■■■□□ 2.52
PVT1-201ENST00000504719 CAP2P40123 477 aa30.79■■■□□ 2.52
PVT1-201ENST00000504719 FASTKD5Q7L8L6 764 aaKnown RBP30.79■■■□□ 2.52
PVT1-201ENST00000504719 METTL16Q86W50 562 aaKnown RBP30.79■■■□□ 2.52
PVT1-201ENST00000504719 PALD1Q9ULE6 856 aa30.79■■■□□ 2.52
PVT1-201ENST00000504719 ATP5JP18859 108 aa30.78■■■□□ 2.52
PVT1-201ENST00000504719 CCDC84Q86UT8 332 aaPredicted RBP30.78■■■□□ 2.52
PVT1-201ENST00000504719 FOXP4Q8IVH2 680 aaPredicted RBP30.78■■■□□ 2.52
PVT1-201ENST00000504719 DCTPP1Q9H773 170 aa30.78■■■□□ 2.52
PVT1-201ENST00000504719 PTPN22Q9Y2R2 807 aa30.78■■■□□ 2.52
PVT1-201ENST00000504719 PDE6AP16499 860 aa30.77■■■□□ 2.52
PVT1-201ENST00000504719 C17orf99Q6UX52 265 aa30.77■■■□□ 2.52
PVT1-201ENST00000504719 BOLA2Q9H3K6 86 aa30.77■■■□□ 2.52
PVT1-201ENST00000504719 SAP30BPQ9UHR5 308 aaKnown RBP30.77■■■□□ 2.52
PVT1-201ENST00000504719 ADGRA2Q96PE1 1338 aa30.76■■■□□ 2.52
PVT1-201ENST00000504719 SMARCA5O60264 1052 aaPredicted RBP30.76■■■□□ 2.51
PVT1-201ENST00000504719 ARHGEF6Q15052 776 aa30.76■■■□□ 2.51
PVT1-201ENST00000504719 SLC9C2Q5TAH2 1124 aa30.76■■■□□ 2.51
PVT1-201ENST00000504719 RIOK1Q9BRS2 568 aaKnown RBP30.76■■■□□ 2.51
PVT1-201ENST00000504719 DNAJC18Q9H819 358 aa30.76■■■□□ 2.51
PVT1-201ENST00000504719 ZSWIM8A7E2V4 1837 aa30.75■■■□□ 2.51
PVT1-201ENST00000504719 TRIM75PA6NK02 468 aa30.75■■■□□ 2.51
PVT1-201ENST00000504719 USP5P45974 858 aa30.75■■■□□ 2.51
PVT1-201ENST00000504719 SOX10P56693 466 aa30.75■■■□□ 2.51
PVT1-201ENST00000504719 GADL1Q6ZQY3 521 aa30.75■■■□□ 2.51
PVT1-201ENST00000504719 EDC3Q96F86 508 aaKnown RBP30.75■■■□□ 2.51
PVT1-201ENST00000504719 TBC1D2Q9BYX2 928 aa30.75■■■□□ 2.51
PVT1-201ENST00000504719 HLA-DOAP06340 250 aa30.74■■■□□ 2.51
PVT1-201ENST00000504719 CRACR2BQ8N4Y2 399 aaPredicted RBP30.74■■■□□ 2.51
PVT1-201ENST00000504719 PARK7Q99497 189 aaKnown RBP30.74■■■□□ 2.51
PVT1-201ENST00000504719 PAG1Q9NWQ8 432 aa30.74■■■□□ 2.51
PVT1-201ENST00000504719 CPA4Q9UI42 421 aa30.74■■■□□ 2.51
PVT1-201ENST00000504719 ZNF532Q9HCE3 1301 aa30.73■■■□□ 2.51
PVT1-201ENST00000504719 MAGEB6P1A0A0J9YX57 407 aa30.73■■■□□ 2.51
PVT1-201ENST00000504719 TCRBV5S4A2TA0A5A2 114 aa30.73■■■□□ 2.51
PVT1-201ENST00000504719 LACTBP83111 547 aaPredicted RBP30.73■■■□□ 2.51
PVT1-201ENST00000504719 HAUS7Q99871 368 aa30.73■■■□□ 2.51
PVT1-201ENST00000504719 TRIM34Q9BYJ4 488 aa30.73■■■□□ 2.51
PVT1-201ENST00000504719 SLC45A1Q9Y2W3 748 aa30.73■■■□□ 2.51
PVT1-201ENST00000504719 MYH7P12883 1935 aa30.73■■■□□ 2.51
PVT1-201ENST00000504719 USP17L5A8MUK1 530 aa30.72■■■□□ 2.51
PVT1-201ENST00000504719 MLLT1Q03111 559 aaPredicted RBP30.72■■■□□ 2.51
PVT1-201ENST00000504719 KIF22Q14807 665 aa30.72■■■□□ 2.51
PVT1-201ENST00000504719 ZNF280CQ8ND82 737 aa30.72■■■□□ 2.51
PVT1-201ENST00000504719 CYP2C8P10632 490 aa30.71■■■□□ 2.51
PVT1-201ENST00000504719 SPP2Q13103 211 aa30.71■■■□□ 2.51
PVT1-201ENST00000504719 EXOC6Q8TAG9 804 aa30.71■■■□□ 2.51
PVT1-201ENST00000504719 ARHGAP39Q9C0H5 1083 aa30.71■■■□□ 2.51
PVT1-201ENST00000504719 LOC285556D6RIA3 1793 aa30.71■■■□□ 2.51
PVT1-201ENST00000504719 NAV1Q8NEY1 1877 aa30.7■■■□□ 2.51
PVT1-201ENST00000504719 SLC4A8Q2Y0W8 1093 aa30.7■■■□□ 2.51
PVT1-201ENST00000504719 DDX60LQ5H9U9 1706 aaKnown RBP30.7■■■□□ 2.5
PVT1-201ENST00000504719 JAG1P78504 1218 aa30.69■■■□□ 2.5
PVT1-201ENST00000504719 AAMPQ13685 434 aa30.69■■■□□ 2.5
PVT1-201ENST00000504719 AS3MTQ9HBK9 375 aa30.69■■■□□ 2.5
PVT1-201ENST00000504719 GINM1Q9NU53 330 aa30.69■■■□□ 2.5
PVT1-201ENST00000504719 AGTPBP1Q9UPW5 1226 aa30.69■■■□□ 2.5
PVT1-201ENST00000504719 ASNSP08243 561 aa30.68■■■□□ 2.5
PVT1-201ENST00000504719 BCRP11274 1271 aa30.68■■■□□ 2.5
PVT1-201ENST00000504719 ADD2P35612 726 aa30.68■■■□□ 2.5
PVT1-201ENST00000504719 PROCA1Q8NCQ7 364 aaPredicted RBP30.68■■■□□ 2.5
PVT1-201ENST00000504719 HTTP42858 3142 aa30.67■■■□□ 2.5
PVT1-201ENST00000504719 TTC6Q86TZ1 520 aa30.67■■■□□ 2.5
PVT1-201ENST00000504719 WDR18Q9BV38 432 aa30.67■■■□□ 2.5
PVT1-201ENST00000504719 CRNKL1Q9BZJ0 848 aaKnown RBP30.67■■■□□ 2.5
PVT1-201ENST00000504719 EHD4Q9H223 541 aa30.67■■■□□ 2.5
PVT1-201ENST00000504719 ECHDC1Q9NTX5 307 aa30.67■■■□□ 2.5
PVT1-201ENST00000504719 MGAMO43451 1857 aa30.67■■■□□ 2.5
PVT1-201ENST00000504719 GDF11O95390 407 aa30.66■■■□□ 2.5
PVT1-201ENST00000504719 GNRH1P01148 92 aa30.66■■■□□ 2.5
PVT1-201ENST00000504719 CTGFP29279 349 aa30.66■■■□□ 2.5
PVT1-201ENST00000504719 SHROOM1Q2M3G4 852 aaPredicted RBP30.66■■■□□ 2.5
PVT1-201ENST00000504719 SH3D19Q5HYK7 790 aa30.66■■■□□ 2.5
PVT1-201ENST00000504719 TREML2Q5T2D2 321 aa30.66■■■□□ 2.5
PVT1-201ENST00000504719 DDX24Q9GZR7 859 aaKnown RBP eCLIP30.66■■■□□ 2.5
PVT1-201ENST00000504719 SERPINB13Q9UIV8 391 aa30.66■■■□□ 2.5
PVT1-201ENST00000504719 TATDN1Q6P1N9 297 aa30.65■■■□□ 2.5
PVT1-201ENST00000504719 LCORLQ8N3X6 602 aa30.65■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms