RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 FOXQ1Q9C009 403 aa4.67□□□□□ -1.66
HMGB3P17-201ENST00000504195 MCOLN1Q9GZU1 580 aa4.67□□□□□ -1.66
HMGB3P17-201ENST00000504195 ZFYVE28Q9HCC9 887 aa4.67□□□□□ -1.66
HMGB3P17-201ENST00000504195 ATP13A1Q9HD20 1204 aa4.67□□□□□ -1.66
HMGB3P17-201ENST00000504195 LATS2Q9NRM7 1088 aa4.67□□□□□ -1.66
HMGB3P17-201ENST00000504195 SLAMF8Q9P0V8 285 aa4.67□□□□□ -1.66
HMGB3P17-201ENST00000504195 ZNF777Q9ULD5 760 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P17-201ENST00000504195 POLIQ9UNA4 740 aa4.67□□□□□ -1.66
HMGB3P17-201ENST00000504195 FAM155AB1AL88 458 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P17-201ENST00000504195 ATG7O95352 703 aa4.66□□□□□ -1.66
HMGB3P17-201ENST00000504195 GRIA4P48058 902 aa4.66□□□□□ -1.66
HMGB3P17-201ENST00000504195 ZXDAP98168 799 aa4.66□□□□□ -1.66
HMGB3P17-201ENST00000504195 PTPN12Q05209 780 aaKnown RBP4.66□□□□□ -1.66
HMGB3P17-201ENST00000504195 ZNF605Q86T29 641 aa4.66□□□□□ -1.66
HMGB3P17-201ENST00000504195 SP8Q8IXZ3 490 aa4.66□□□□□ -1.66
HMGB3P17-201ENST00000504195 ZDHHC14Q8IZN3 488 aa4.66□□□□□ -1.66
HMGB3P17-201ENST00000504195 FEZF2Q8TBJ5 459 aa4.66□□□□□ -1.66
HMGB3P17-201ENST00000504195 TEPSINQ96N21 525 aa4.66□□□□□ -1.66
HMGB3P17-201ENST00000504195 TCF12Q99081 682 aa4.66□□□□□ -1.66
HMGB3P17-201ENST00000504195 BDH2Q9BUT1 245 aa4.66□□□□□ -1.66
HMGB3P17-201ENST00000504195 DISC1Q9NRI5 854 aa4.66□□□□□ -1.66
HMGB3P17-201ENST00000504195 KRT82Q9NSB4 513 aa4.66□□□□□ -1.66
HMGB3P17-201ENST00000504195 GALNT12Q8IXK2 581 aa4.65□□□□□ -1.67
HMGB3P17-201ENST00000504195 ZNF576Q9H609 170 aa4.65□□□□□ -1.67
HMGB3P17-201ENST00000504195 PRDM5Q9NQX1 630 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P17-201ENST00000504195 SEPT3Q9UH03 358 aa4.65□□□□□ -1.67
HMGB3P17-201ENST00000504195 FOXD3Q9UJU5 478 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P17-201ENST00000504195 A0A1W2PP55 124 aa4.64□□□□□ -1.67
HMGB3P17-201ENST00000504195 GRIN3BO60391 1043 aa4.64□□□□□ -1.67
HMGB3P17-201ENST00000504195 PEX10O60683 326 aa4.64□□□□□ -1.67
HMGB3P17-201ENST00000504195 ITPKAP23677 461 aa4.64□□□□□ -1.67
HMGB3P17-201ENST00000504195 MPSTP25325 297 aa4.64□□□□□ -1.67
HMGB3P17-201ENST00000504195 AAMPQ13685 434 aa4.64□□□□□ -1.67
HMGB3P17-201ENST00000504195 SPRED3Q2MJR0 410 aa4.64□□□□□ -1.67
HMGB3P17-201ENST00000504195 KIF4BQ2VIQ3 1234 aa4.64□□□□□ -1.67
HMGB3P17-201ENST00000504195 RPS26P11Q5JNZ5 115 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P17-201ENST00000504195 TMEM164Q5U3C3 297 aa4.64□□□□□ -1.67
HMGB3P17-201ENST00000504195 IRF2BP1Q8IU81 584 aa4.64□□□□□ -1.67
HMGB3P17-201ENST00000504195 ISL2Q96A47 359 aa4.64□□□□□ -1.67
HMGB3P17-201ENST00000504195 WDR89Q96FK6 387 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P17-201ENST00000504195 HSPA12BQ96MM6 686 aa4.64□□□□□ -1.67
HMGB3P17-201ENST00000504195 ZC3H12CQ9C0D7 883 aaKnown RBP4.64□□□□□ -1.67
HMGB3P17-201ENST00000504195 SLC6A17Q9H1V8 727 aa4.64□□□□□ -1.67
HMGB3P17-201ENST00000504195 PRDM10Q9NQV6 1147 aa4.64□□□□□ -1.67
HMGB3P17-201ENST00000504195 ZC3H12DA2A288 527 aaKnown RBP4.63□□□□□ -1.67
HMGB3P17-201ENST00000504195 H3BS24 57 aa4.63□□□□□ -1.67
HMGB3P17-201ENST00000504195 NEFLP07196 543 aa4.63□□□□□ -1.67
HMGB3P17-201ENST00000504195 ATP2B4P23634 1241 aa4.63□□□□□ -1.67
HMGB3P17-201ENST00000504195 HMGA2P52926 109 aa4.63□□□□□ -1.67
HMGB3P17-201ENST00000504195 CDKAL1Q5VV42 579 aa4.63□□□□□ -1.67
HMGB3P17-201ENST00000504195 KIAA0319Q5VV43 1072 aa4.63□□□□□ -1.67
HMGB3P17-201ENST00000504195 CCDC86Q9H6F5 360 aaKnown RBP4.63□□□□□ -1.67
HMGB3P17-201ENST00000504195 MAPK8IP1Q9UQF2 711 aa4.63□□□□□ -1.67
HMGB3P17-201ENST00000504195 TEX51A0A1B0GUA7 166 aa4.62□□□□□ -1.67
HMGB3P17-201ENST00000504195 FAM13AO94988 1023 aa4.62□□□□□ -1.67
HMGB3P17-201ENST00000504195 NEFMP07197 916 aa4.62□□□□□ -1.67
HMGB3P17-201ENST00000504195 NPR3P17342 541 aa4.62□□□□□ -1.67
HMGB3P17-201ENST00000504195 AFF3P51826 1226 aaKnown RBP4.62□□□□□ -1.67
HMGB3P17-201ENST00000504195 HK2P52789 917 aa4.62□□□□□ -1.67
HMGB3P17-201ENST00000504195 FAM214BQ7L5A3 538 aa4.62□□□□□ -1.67
HMGB3P17-201ENST00000504195 RNF32Q9H0A6 362 aa4.62□□□□□ -1.67
HMGB3P17-201ENST00000504195 ADAM7Q9H2U9 754 aa4.62□□□□□ -1.67
HMGB3P17-201ENST00000504195 WDR26Q9H7D7 661 aa4.62□□□□□ -1.67
HMGB3P17-201ENST00000504195 TMEM59LQ9UK28 342 aa4.62□□□□□ -1.67
HMGB3P17-201ENST00000504195 PCDHGC5Q9Y5F6 944 aa4.62□□□□□ -1.67
HMGB3P17-201ENST00000504195 MYOCOSA0A1B0GUC4 107 aa4.61□□□□□ -1.67
HMGB3P17-201ENST00000504195 FSHBP01225 129 aa4.61□□□□□ -1.67
HMGB3P17-201ENST00000504195 PI3P19957 117 aa4.61□□□□□ -1.67
HMGB3P17-201ENST00000504195 ERVFC1P60507 584 aa4.61□□□□□ -1.67
HMGB3P17-201ENST00000504195 SSPNQ14714 243 aa4.61□□□□□ -1.67
HMGB3P17-201ENST00000504195 ZNF827Q17R98 1081 aa4.61□□□□□ -1.67
HMGB3P17-201ENST00000504195 SLC16A11Q8NCK7 471 aa4.61□□□□□ -1.67
HMGB3P17-201ENST00000504195 MENTQ9BUN1 341 aa4.61□□□□□ -1.67
HMGB3P17-201ENST00000504195 IRAK3Q9Y616 596 aa4.61□□□□□ -1.67
HMGB3P17-201ENST00000504195 ZNF862O60290 1169 aa4.6□□□□□ -1.67
HMGB3P17-201ENST00000504195 HPXP02790 462 aa4.6□□□□□ -1.67
HMGB3P17-201ENST00000504195 GSTP1P09211 210 aaKnown RBP4.6□□□□□ -1.67
HMGB3P17-201ENST00000504195 ERVK-24P63145 666 aa4.6□□□□□ -1.67
HMGB3P17-201ENST00000504195 HHIPL2Q6UWX4 724 aa4.6□□□□□ -1.67
HMGB3P17-201ENST00000504195 MFSD4AQ8N468 514 aa4.6□□□□□ -1.67
HMGB3P17-201ENST00000504195 RNF214Q8ND24 703 aa4.6□□□□□ -1.67
HMGB3P17-201ENST00000504195 SORCS2Q96PQ0 1159 aa4.6□□□□□ -1.67
HMGB3P17-201ENST00000504195 DNAJC25-GNG10A0A024R161 153 aa4.59□□□□□ -1.67
HMGB3P17-201ENST00000504195 SLC22A31A6NKX4 558 aa4.59□□□□□ -1.67
HMGB3P17-201ENST00000504195 POLR3DP05423 398 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P17-201ENST00000504195 TNFRSF1AP19438 455 aa4.59□□□□□ -1.67
HMGB3P17-201ENST00000504195 PDE6BP35913 854 aa4.59□□□□□ -1.67
HMGB3P17-201ENST00000504195 SRPK2P78362 688 aaKnown RBP4.59□□□□□ -1.67
HMGB3P17-201ENST00000504195 GJD3Q8N144 294 aa4.59□□□□□ -1.67
HMGB3P17-201ENST00000504195 SGPP1Q9BX95 441 aa4.59□□□□□ -1.67
HMGB3P17-201ENST00000504195 DNAJC25Q9H1X3 360 aa4.59□□□□□ -1.67
HMGB3P17-201ENST00000504195 EHD4Q9H223 541 aa4.59□□□□□ -1.67
HMGB3P17-201ENST00000504195 K7ESM1 405 aa4.58□□□□□ -1.68
HMGB3P17-201ENST00000504195 PPP2R3AQ06190 1150 aa4.58□□□□□ -1.68
HMGB3P17-201ENST00000504195 RALGPS1Q5JS13 557 aa4.58□□□□□ -1.68
HMGB3P17-201ENST00000504195 FRMD5Q7Z6J6 570 aa4.58□□□□□ -1.68
HMGB3P17-201ENST00000504195 THAP5Q7Z6K1 395 aa4.58□□□□□ -1.68
HMGB3P17-201ENST00000504195 GTF3C2Q8WUA4 911 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P17-201ENST00000504195 SIGLEC10Q96LC7 697 aa4.58□□□□□ -1.68
HMGB3P17-201ENST00000504195 GCM1Q9NP62 436 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms