RNA–Protein interactions for RNA: ENST00000503682.5

COPS4-202, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5 BASIC

Gene COPS4, Length 1,702 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-202ENST00000503682 SCYL3Q8IZE3 742 aa12.44□□□□□ -0.42
COPS4-202ENST00000503682 CLASRPQ8N2M8 674 aaKnown RBP12.44□□□□□ -0.42
COPS4-202ENST00000503682 NOL10Q9BSC4 688 aaKnown RBP12.44□□□□□ -0.42
COPS4-202ENST00000503682 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.44□□□□□ -0.42
COPS4-202ENST00000503682 SAP30BPQ9UHR5 308 aaKnown RBP12.44□□□□□ -0.42
COPS4-202ENST00000503682 ZHX2Q9Y6X8 837 aa12.44□□□□□ -0.42
COPS4-202ENST00000503682 SP3Q02447 781 aa12.43□□□□□ -0.42
COPS4-202ENST00000503682 MAP3K10Q02779 954 aa12.43□□□□□ -0.42
COPS4-202ENST00000503682 MOGSQ13724 837 aa12.43□□□□□ -0.42
COPS4-202ENST00000503682 SHROOM1Q2M3G4 852 aaPredicted RBP12.43□□□□□ -0.42
COPS4-202ENST00000503682 SLFNL1Q499Z3 407 aa12.43□□□□□ -0.42
COPS4-202ENST00000503682 OTOP1Q7RTM1 612 aa12.43□□□□□ -0.42
COPS4-202ENST00000503682 DNAJC2Q99543 621 aaKnown RBP12.43□□□□□ -0.42
COPS4-202ENST00000503682 ZFYVE28Q9HCC9 887 aa12.43□□□□□ -0.42
COPS4-202ENST00000503682 RTN4Q9NQC3 1192 aaKnown RBP12.43□□□□□ -0.42
COPS4-202ENST00000503682 PALD1Q9ULE6 856 aa12.43□□□□□ -0.42
COPS4-202ENST00000503682 FLT1P17948 1338 aa12.43□□□□□ -0.42
COPS4-202ENST00000503682 BAG3O95817 575 aa12.42□□□□□ -0.42
COPS4-202ENST00000503682 CHGBP05060 677 aa12.42□□□□□ -0.42
COPS4-202ENST00000503682 IFIT2P09913 472 aaKnown RBP12.42□□□□□ -0.42
COPS4-202ENST00000503682 PTPRAP18433 802 aa12.42□□□□□ -0.42
COPS4-202ENST00000503682 PPP4CP60510 307 aa12.42□□□□□ -0.42
COPS4-202ENST00000503682 ARHGAP39Q9C0H5 1083 aa12.42□□□□□ -0.42
COPS4-202ENST00000503682 PICK1Q9NRD5 415 aa12.42□□□□□ -0.42
COPS4-202ENST00000503682 KCNH4Q9UQ05 1017 aa12.42□□□□□ -0.42
COPS4-202ENST00000503682 TNRC18O15417 2968 aaPredicted RBP12.42□□□□□ -0.42
COPS4-202ENST00000503682 PDHXO00330 501 aa12.42□□□□□ -0.42
COPS4-202ENST00000503682 GOLIM4O00461 696 aa12.42□□□□□ -0.42
COPS4-202ENST00000503682 FBXO46Q6PJ61 603 aaPredicted RBP12.42□□□□□ -0.42
COPS4-202ENST00000503682 BOLA2Q9H3K6 86 aa12.42□□□□□ -0.42
COPS4-202ENST00000503682 CPA4Q9UI42 421 aa12.42□□□□□ -0.42
COPS4-202ENST00000503682 MYH7P12883 1935 aa12.42□□□□□ -0.42
COPS4-202ENST00000503682 TRIM75PA6NK02 468 aa12.41□□□□□ -0.42
COPS4-202ENST00000503682 RAB11FIP3O75154 756 aa12.41□□□□□ -0.42
COPS4-202ENST00000503682 JAG1P78504 1218 aa12.41□□□□□ -0.42
COPS4-202ENST00000503682 GPAT2Q6NUI2 795 aa12.41□□□□□ -0.42
COPS4-202ENST00000503682 GADL1Q6ZQY3 521 aa12.41□□□□□ -0.42
COPS4-202ENST00000503682 ERO1AQ96HE7 468 aa12.41□□□□□ -0.42
COPS4-202ENST00000503682 DNAJC18Q9H819 358 aa12.41□□□□□ -0.42
COPS4-202ENST00000503682 AFG3L2Q9Y4W6 797 aa12.41□□□□□ -0.42
COPS4-202ENST00000503682 NAV1Q8NEY1 1877 aa12.4□□□□□ -0.42
COPS4-202ENST00000503682 TBC1D12O60347 775 aa12.4□□□□□ -0.42
COPS4-202ENST00000503682 TLR2O60603 784 aa12.4□□□□□ -0.42
COPS4-202ENST00000503682 CTNND1O60716 968 aaKnown RBP12.4□□□□□ -0.42
COPS4-202ENST00000503682 CYP2C8P10632 490 aa12.4□□□□□ -0.42
COPS4-202ENST00000503682 EVX2Q03828 476 aa12.4□□□□□ -0.42
COPS4-202ENST00000503682 MAP3K12Q12852 859 aa12.4□□□□□ -0.42
COPS4-202ENST00000503682 CHMP4BQ9H444 224 aaKnown RBP12.4□□□□□ -0.42
COPS4-202ENST00000503682 EFCC1Q9HA90 598 aa12.4□□□□□ -0.42
COPS4-202ENST00000503682 PCDHB15Q9Y5E8 787 aa12.4□□□□□ -0.42
COPS4-202ENST00000503682 BAZ2AQ9UIF9 1905 aaKnown RBP12.4□□□□□ -0.42
COPS4-202ENST00000503682 MGAMO43451 1857 aa12.4□□□□□ -0.42
COPS4-202ENST00000503682 MKI67P46013 3256 aaKnown RBP12.4□□□□□ -0.42
COPS4-202ENST00000503682 MAP4K4O95819 1239 aaPredicted RBP12.4□□□□□ -0.43
COPS4-202ENST00000503682 PLCG2P16885 1265 aa12.4□□□□□ -0.43
COPS4-202ENST00000503682 CTGFP29279 349 aa12.4□□□□□ -0.43
COPS4-202ENST00000503682 PKN2Q16513 984 aaKnown RBP12.4□□□□□ -0.43
COPS4-202ENST00000503682 ANKRD23Q86SG2 305 aa12.4□□□□□ -0.43
COPS4-202ENST00000503682 PI4KBQ9UBF8 816 aa12.4□□□□□ -0.43
COPS4-202ENST00000503682 COL2A1P02458 1487 aaPredicted RBP12.39□□□□□ -0.43
COPS4-202ENST00000503682 A0A0G2JLL6 359 aaPredicted RBP12.39□□□□□ -0.43
COPS4-202ENST00000503682 CXCL11O14625 94 aa12.39□□□□□ -0.43
COPS4-202ENST00000503682 GDF11O95390 407 aa12.39□□□□□ -0.43
COPS4-202ENST00000503682 PDE6AP16499 860 aa12.39□□□□□ -0.43
COPS4-202ENST00000503682 CAP2P40123 477 aa12.39□□□□□ -0.43
COPS4-202ENST00000503682 USP5P45974 858 aa12.39□□□□□ -0.43
COPS4-202ENST00000503682 RRP1P56182 461 aaKnown RBP12.39□□□□□ -0.43
COPS4-202ENST00000503682 SPP2Q13103 211 aa12.39□□□□□ -0.43
COPS4-202ENST00000503682 SLC9C2Q5TAH2 1124 aa12.39□□□□□ -0.43
COPS4-202ENST00000503682 TSHZ3Q63HK5 1081 aa12.39□□□□□ -0.43
COPS4-202ENST00000503682 PRRT2Q7Z6L0 340 aaPredicted RBP12.39□□□□□ -0.43
COPS4-202ENST00000503682 RIOK1Q9BRS2 568 aaKnown RBP12.39□□□□□ -0.43
COPS4-202ENST00000503682 LRRCC1Q9C099 1032 aa12.39□□□□□ -0.43
COPS4-202ENST00000503682 PTPN22Q9Y2R2 807 aa12.39□□□□□ -0.43
COPS4-202ENST00000503682 DOCK3Q8IZD9 2030 aa12.38□□□□□ -0.43
COPS4-202ENST00000503682 ZNF532Q9HCE3 1301 aa12.38□□□□□ -0.43
COPS4-202ENST00000503682 TREML2Q5T2D2 321 aa12.38□□□□□ -0.43
COPS4-202ENST00000503682 C17orf99Q6UX52 265 aa12.38□□□□□ -0.43
COPS4-202ENST00000503682 CRACR2BQ8N4Y2 399 aaPredicted RBP12.38□□□□□ -0.43
COPS4-202ENST00000503682 CRBNQ96SW2 442 aa12.38□□□□□ -0.43
COPS4-202ENST00000503682 MYCP01106 439 aaPredicted RBP12.37□□□□□ -0.43
COPS4-202ENST00000503682 RGS19P49795 217 aa12.37□□□□□ -0.43
COPS4-202ENST00000503682 LACTBP83111 547 aaPredicted RBP12.37□□□□□ -0.43
COPS4-202ENST00000503682 MLLT1Q03111 559 aaPredicted RBP12.37□□□□□ -0.43
COPS4-202ENST00000503682 SDR42E1Q8WUS8 393 aa12.37□□□□□ -0.43
COPS4-202ENST00000503682 DHX36Q9H2U1 1008 aaKnown RBP12.37□□□□□ -0.43
COPS4-202ENST00000503682 PAG1Q9NWQ8 432 aa12.37□□□□□ -0.43
COPS4-202ENST00000503682 PTCH2Q9Y6C5 1203 aa12.37□□□□□ -0.43
COPS4-202ENST00000503682 DDX60LQ5H9U9 1706 aaKnown RBP12.37□□□□□ -0.43
COPS4-202ENST00000503682 ADGRA2Q96PE1 1338 aa12.37□□□□□ -0.43
COPS4-202ENST00000503682 MAGEB6P1A0A0J9YX57 407 aa12.37□□□□□ -0.43
COPS4-202ENST00000503682 TCRBV5S4A2TA0A5A2 114 aa12.37□□□□□ -0.43
COPS4-202ENST00000503682 ATP5JP18859 108 aa12.37□□□□□ -0.43
COPS4-202ENST00000503682 PLCD1P51178 756 aa12.37□□□□□ -0.43
COPS4-202ENST00000503682 TTF1Q15361 905 aaPredicted RBP12.37□□□□□ -0.43
COPS4-202ENST00000503682 LCORLQ8N3X6 602 aa12.37□□□□□ -0.43
COPS4-202ENST00000503682 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.37□□□□□ -0.43
COPS4-202ENST00000503682 DCTPP1Q9H773 170 aa12.37□□□□□ -0.43
COPS4-202ENST00000503682 ZCCHC17Q9NP64 241 aaKnown RBP12.37□□□□□ -0.43
COPS4-202ENST00000503682 HERC5Q9UII4 1024 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms