RNA–Protein interactions for RNA: ENST00000499732.2

NEAT1-201, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 1,811 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-201ENST00000499732 ARHGAP27Q6ZUM4 889 aa16.82■□□□□ 0.28
NEAT1-201ENST00000499732 C15orf52Q6ZUT6 534 aaKnown RBP16.82■□□□□ 0.28
NEAT1-201ENST00000499732 FBXO33Q7Z6M2 555 aa16.82■□□□□ 0.28
NEAT1-201ENST00000499732 FBXL16Q8N461 479 aa16.82■□□□□ 0.28
NEAT1-201ENST00000499732 ZNF274Q96GC6 653 aaPredicted RBP16.82■□□□□ 0.28
NEAT1-201ENST00000499732 GOLPH3LQ9H4A5 285 aa16.82■□□□□ 0.28
NEAT1-201ENST00000499732 ATP6V0A2Q9Y487 856 aa16.82■□□□□ 0.28
NEAT1-201ENST00000499732 CACNA1SQ13698 1873 aa16.82■□□□□ 0.28
NEAT1-201ENST00000499732 U2AF2P26368 475 aaKnown RBP eCLIP16.82■□□□□ 0.281e-323■□□□□ 11
NEAT1-201ENST00000499732 GPSM2P81274 684 aa16.82■□□□□ 0.28
NEAT1-201ENST00000499732 VPS37DQ86XT2 251 aa16.82■□□□□ 0.28
NEAT1-201ENST00000499732 DHX40Q8IX18 779 aaKnown RBP16.82■□□□□ 0.28
NEAT1-201ENST00000499732 CEP57L1Q8IYX8 460 aa16.82■□□□□ 0.28
NEAT1-201ENST00000499732 USP28Q96RU2 1077 aa16.82■□□□□ 0.28
NEAT1-201ENST00000499732 NAT10Q9H0A0 1025 aaKnown RBP16.82■□□□□ 0.28
NEAT1-201ENST00000499732 OGFRQ9NZT2 677 aa16.82■□□□□ 0.28
NEAT1-201ENST00000499732 IRS2Q9Y4H2 1338 aa16.81■□□□□ 0.28
NEAT1-201ENST00000499732 KIF13BQ9NQT8 1826 aa16.81■□□□□ 0.28
NEAT1-201ENST00000499732 SEMA3EO15041 775 aa16.81■□□□□ 0.28
NEAT1-201ENST00000499732 KIF20AO95235 890 aa16.81■□□□□ 0.28
NEAT1-201ENST00000499732 GSDMDP57764 484 aa16.81■□□□□ 0.28
NEAT1-201ENST00000499732 DALRD3Q5D0E6 543 aaKnown RBP16.81■□□□□ 0.28
NEAT1-201ENST00000499732 NYAP1Q6ZVC0 841 aa16.81■□□□□ 0.28
NEAT1-201ENST00000499732 ZNF622Q969S3 477 aaKnown RBP eCLIP16.81■□□□□ 0.28
NEAT1-201ENST00000499732 STRBPQ96SI9 672 aaKnown RBP16.81■□□□□ 0.28
NEAT1-201ENST00000499732 DLEC1Q9Y238 1755 aa16.81■□□□□ 0.28
NEAT1-201ENST00000499732 KIF2AO00139 706 aaPredicted RBP16.8■□□□□ 0.28
NEAT1-201ENST00000499732 CHRNA5P30532 468 aa16.8■□□□□ 0.28
NEAT1-201ENST00000499732 HIBADHP31937 336 aaKnown RBP16.8■□□□□ 0.28
NEAT1-201ENST00000499732 IMMTQ16891 758 aaKnown RBP16.8■□□□□ 0.28
NEAT1-201ENST00000499732 CNKSR1Q969H4 720 aa16.8■□□□□ 0.28
NEAT1-201ENST00000499732 LRRC2Q9BYS8 371 aa16.8■□□□□ 0.28
NEAT1-201ENST00000499732 TMX4Q9H1E5 349 aaPredicted RBP16.8■□□□□ 0.28
NEAT1-201ENST00000499732 GGA1Q9UJY5 639 aa16.8■□□□□ 0.28
NEAT1-201ENST00000499732 A0A1W2PQ27 194 aa16.8■□□□□ 0.28
NEAT1-201ENST00000499732 A0A1W2PQ64 194 aa16.8■□□□□ 0.28
NEAT1-201ENST00000499732 A0A1W2PQD8 194 aa16.8■□□□□ 0.28
NEAT1-201ENST00000499732 CEBPZQ03701 1054 aaKnown RBP16.8■□□□□ 0.28
NEAT1-201ENST00000499732 APOBRQ0VD83 1088 aa16.8■□□□□ 0.28
NEAT1-201ENST00000499732 DHX8Q14562 1220 aaKnown RBP16.8■□□□□ 0.28
NEAT1-201ENST00000499732 AIDAQ96BJ3 306 aa16.8■□□□□ 0.28
NEAT1-201ENST00000499732 BPIFA3Q9BQP9 254 aa16.8■□□□□ 0.28
NEAT1-201ENST00000499732 IMPACTQ9P2X3 320 aa16.8■□□□□ 0.28
NEAT1-201ENST00000499732 DENND2AQ9ULE3 1009 aa16.8■□□□□ 0.28
NEAT1-201ENST00000499732 MBD4O95243 580 aa16.79■□□□□ 0.28
NEAT1-201ENST00000499732 EVCP57679 992 aa16.79■□□□□ 0.28
NEAT1-201ENST00000499732 HAND2P61296 217 aa16.79■□□□□ 0.28
NEAT1-201ENST00000499732 CCZ1BP86790 482 aa16.79■□□□□ 0.28
NEAT1-201ENST00000499732 CCZ1P86791 482 aaPredicted RBP16.79■□□□□ 0.28
NEAT1-201ENST00000499732 PTPN14Q15678 1187 aa16.79■□□□□ 0.28
NEAT1-201ENST00000499732 FSIP1Q8NA03 581 aa16.79■□□□□ 0.28
NEAT1-201ENST00000499732 MRPS27Q92552 414 aaKnown RBP16.79■□□□□ 0.28
NEAT1-201ENST00000499732 LRP2BPQ9P2M1 347 aa16.79■□□□□ 0.28
NEAT1-201ENST00000499732 LTBP1Q14766 1721 aa16.79■□□□□ 0.28
NEAT1-201ENST00000499732 PDS5AQ29RF7 1337 aaKnown RBP16.79■□□□□ 0.28
NEAT1-201ENST00000499732 MAST2Q6P0Q8 1798 aa16.78■□□□□ 0.28
NEAT1-201ENST00000499732 CCDC69A6NI79 296 aa16.78■□□□□ 0.28
NEAT1-201ENST00000499732 UFL1O94874 794 aa16.78■□□□□ 0.28
NEAT1-201ENST00000499732 SKILP12757 684 aa16.78■□□□□ 0.28
NEAT1-201ENST00000499732 KCNA3P22001 575 aa16.78■□□□□ 0.28
NEAT1-201ENST00000499732 ADALQ6DHV7 355 aa16.78■□□□□ 0.28
NEAT1-201ENST00000499732 OSBPL5Q9H0X9 879 aaPredicted RBP16.78■□□□□ 0.28
NEAT1-201ENST00000499732 RTEL1Q9NZ71 1219 aa16.78■□□□□ 0.28
NEAT1-201ENST00000499732 SPDYE4A6NLX3 237 aa16.77■□□□□ 0.28
NEAT1-201ENST00000499732 PDIA3P30101 505 aaKnown RBP16.77■□□□□ 0.28
NEAT1-201ENST00000499732 ME1P48163 572 aa16.77■□□□□ 0.28
NEAT1-201ENST00000499732 TXNRD3Q86VQ6 643 aa16.77■□□□□ 0.28
NEAT1-201ENST00000499732 FMR1NBQ8N0W7 255 aaPredicted RBP16.77■□□□□ 0.28
NEAT1-201ENST00000499732 RGS22Q8NE09 1264 aa16.77■□□□□ 0.28
NEAT1-201ENST00000499732 TBC1D16Q8TBP0 767 aa16.77■□□□□ 0.28
NEAT1-201ENST00000499732 FTOQ9C0B1 505 aaKnown RBP eCLIP16.77■□□□□ 0.28
NEAT1-201ENST00000499732 NBPF3Q9H094 633 aa16.77■□□□□ 0.28
NEAT1-201ENST00000499732 ZMYM6O95789 1325 aa16.77■□□□□ 0.28
NEAT1-201ENST00000499732 ALX1Q15699 326 aa16.77■□□□□ 0.27
NEAT1-201ENST00000499732 ZNF804AQ7Z570 1209 aa16.77■□□□□ 0.27
NEAT1-201ENST00000499732 ARMT1Q9H993 441 aa16.77■□□□□ 0.27
NEAT1-201ENST00000499732 EPB41L4AQ9HCS5 686 aaPredicted RBP16.77■□□□□ 0.27
NEAT1-201ENST00000499732 ABCF2Q9UG63 623 aa16.77■□□□□ 0.27
NEAT1-201ENST00000499732 SLX4Q8IY92 1834 aa16.77■□□□□ 0.27
NEAT1-201ENST00000499732 CCDC88AQ3V6T2 1871 aa16.77■□□□□ 0.27
NEAT1-201ENST00000499732 TIAM2Q8IVF5 1701 aa16.76■□□□□ 0.27
NEAT1-201ENST00000499732 KIAA1551Q9HCM1 1747 aa16.76■□□□□ 0.27
NEAT1-201ENST00000499732 ZNF213O14771 459 aa16.76■□□□□ 0.27
NEAT1-201ENST00000499732 HSPA6P17066 643 aa16.76■□□□□ 0.27
NEAT1-201ENST00000499732 KCNJ6P48051 423 aa16.76■□□□□ 0.27
NEAT1-201ENST00000499732 ADGRA1Q86SQ6 560 aa16.76■□□□□ 0.27
NEAT1-201ENST00000499732 CCAR2Q8N163 923 aaKnown RBP16.76■□□□□ 0.27
NEAT1-201ENST00000499732 LCORLQ8N3X6 602 aa16.76■□□□□ 0.27
NEAT1-201ENST00000499732 KCNG4Q8TDN1 519 aa16.76■□□□□ 0.27
NEAT1-201ENST00000499732 POLLQ9UGP5 575 aa16.76■□□□□ 0.27
NEAT1-201ENST00000499732 DDX41Q9UJV9 622 aaKnown RBP16.76■□□□□ 0.27
NEAT1-201ENST00000499732 PATL2C9JE40 543 aaKnown RBP16.75■□□□□ 0.27
NEAT1-201ENST00000499732 YEATS4O95619 227 aa16.75■□□□□ 0.27
NEAT1-201ENST00000499732 APPP05067 770 aa16.75■□□□□ 0.27
NEAT1-201ENST00000499732 CYP7A1P22680 504 aa16.75■□□□□ 0.27
NEAT1-201ENST00000499732 CCT2P78371 535 aaKnown RBP16.75■□□□□ 0.27
NEAT1-201ENST00000499732 GABPB1Q06547 395 aaPredicted RBP16.75■□□□□ 0.27
NEAT1-201ENST00000499732 MB21D2Q8IYB1 491 aaPredicted RBP16.75■□□□□ 0.27
NEAT1-201ENST00000499732 AOPEPQ8N6M6 819 aa16.75■□□□□ 0.27
NEAT1-201ENST00000499732 CCDC150Q8NCX0 1101 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms