RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 PHF20L1A8MW92 1017 aa18.66■□□□□ 0.58
CPNE1-228ENST00000498814 FAM155AB1AL88 458 aaPredicted RBP18.66■□□□□ 0.58
CPNE1-228ENST00000498814 POLR3DP05423 398 aaPredicted RBP18.66■□□□□ 0.58
CPNE1-228ENST00000498814 RASAL3Q86YV0 1011 aa18.66■□□□□ 0.58
CPNE1-228ENST00000498814 SLC10A4Q96EP9 437 aa18.66■□□□□ 0.58
CPNE1-228ENST00000498814 CLMNQ96JQ2 1002 aa18.66■□□□□ 0.58
CPNE1-228ENST00000498814 EHD4Q9H223 541 aa18.66■□□□□ 0.58
CPNE1-228ENST00000498814 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.66■□□□□ 0.58
CPNE1-228ENST00000498814 DIAPH3Q9NSV4 1193 aa18.66■□□□□ 0.58
CPNE1-228ENST00000498814 CSADQ9Y600 493 aa18.66■□□□□ 0.58
CPNE1-228ENST00000498814 WDR33Q9C0J8 1336 aaKnown RBP18.66■□□□□ 0.58
CPNE1-228ENST00000498814 DOCK1Q14185 1865 aa18.65■□□□□ 0.58
CPNE1-228ENST00000498814 THSD7BQ9C0I4 1608 aa18.65■□□□□ 0.58
CPNE1-228ENST00000498814 PATL2C9JE40 543 aaKnown RBP18.65■□□□□ 0.58
CPNE1-228ENST00000498814 SLC10A3P09131 477 aa18.65■□□□□ 0.58
CPNE1-228ENST00000498814 SLURP2P0DP57 97 aa18.65■□□□□ 0.58
CPNE1-228ENST00000498814 VGLL4Q14135 290 aa18.65■□□□□ 0.58
CPNE1-228ENST00000498814 BMP2KLQ5H9B9 411 aa18.65■□□□□ 0.58
CPNE1-228ENST00000498814 SERPINB13Q9UIV8 391 aa18.65■□□□□ 0.58
CPNE1-228ENST00000498814 LAMB1P07942 1786 aa18.65■□□□□ 0.58
CPNE1-228ENST00000498814 ATAD5Q96QE3 1844 aa18.65■□□□□ 0.58
CPNE1-228ENST00000498814 INPP5BP32019 993 aa18.64■□□□□ 0.57
CPNE1-228ENST00000498814 PLCD1P51178 756 aa18.64■□□□□ 0.57
CPNE1-228ENST00000498814 SLC4A8Q2Y0W8 1093 aa18.64■□□□□ 0.57
CPNE1-228ENST00000498814 NOL9Q5SY16 702 aaKnown RBP18.64■□□□□ 0.57
CPNE1-228ENST00000498814 CCDC129Q6ZRS4 1044 aa18.64■□□□□ 0.57
CPNE1-228ENST00000498814 CRACR2BQ8N4Y2 399 aaPredicted RBP18.64■□□□□ 0.57
CPNE1-228ENST00000498814 ZKSCAN4Q969J2 545 aaPredicted RBP18.64■□□□□ 0.57
CPNE1-228ENST00000498814 TAOK2Q9UL54 1235 aa18.64■□□□□ 0.57
CPNE1-228ENST00000498814 MYH8P13535 1937 aa18.64■□□□□ 0.57
CPNE1-228ENST00000498814 FAM196BA6NMK8 535 aa18.63■□□□□ 0.57
CPNE1-228ENST00000498814 USP17L12C9JPN9 530 aa18.63■□□□□ 0.57
CPNE1-228ENST00000498814 USP17L21D6R901 530 aa18.63■□□□□ 0.57
CPNE1-228ENST00000498814 CTNND1O60716 968 aaKnown RBP18.63■□□□□ 0.57
CPNE1-228ENST00000498814 NOGQ13253 232 aa18.63■□□□□ 0.57
CPNE1-228ENST00000498814 GRM1Q13255 1194 aa18.63■□□□□ 0.57
CPNE1-228ENST00000498814 SBK1Q52WX2 424 aa18.63■□□□□ 0.57
CPNE1-228ENST00000498814 C12orf60Q5U649 245 aa18.63■□□□□ 0.57
CPNE1-228ENST00000498814 CWC27Q6UX04 472 aaKnown RBP18.63■□□□□ 0.57
CPNE1-228ENST00000498814 AMOTL1Q8IY63 956 aa18.63■□□□□ 0.57
CPNE1-228ENST00000498814 TRIM34Q9BYJ4 488 aa18.63■□□□□ 0.57
CPNE1-228ENST00000498814 NACAP1Q9BZK3 213 aa18.63■□□□□ 0.57
CPNE1-228ENST00000498814 DNAJC18Q9H819 358 aa18.63■□□□□ 0.57
CPNE1-228ENST00000498814 EPB41L4AQ9HCS5 686 aaPredicted RBP18.63■□□□□ 0.57
CPNE1-228ENST00000498814 ARPP21Q9UBL0 812 aaPredicted RBP18.63■□□□□ 0.57
CPNE1-228ENST00000498814 SNCAIPQ9Y6H5 919 aa18.63■□□□□ 0.57
CPNE1-228ENST00000498814 APPP05067 770 aa18.62■□□□□ 0.57
CPNE1-228ENST00000498814 CYP2D6P10635 497 aa18.62■□□□□ 0.57
CPNE1-228ENST00000498814 CHMLP26374 656 aa18.62■□□□□ 0.57
CPNE1-228ENST00000498814 MAP2K2P36507 400 aa18.62■□□□□ 0.57
CPNE1-228ENST00000498814 MFAP1P55081 439 aaKnown RBP18.62■□□□□ 0.57
CPNE1-228ENST00000498814 GABPAQ06546 454 aa18.62■□□□□ 0.57
CPNE1-228ENST00000498814 SPRYD7Q5W111 196 aa18.62■□□□□ 0.57
CPNE1-228ENST00000498814 CTR9Q6PD62 1173 aa18.62■□□□□ 0.57
CPNE1-228ENST00000498814 ZNF589Q86UQ0 364 aaPredicted RBP18.62■□□□□ 0.57
CPNE1-228ENST00000498814 IFNL3Q8IZI9 196 aa18.62■□□□□ 0.57
CPNE1-228ENST00000498814 WNK4Q96J92 1243 aa18.62■□□□□ 0.57
CPNE1-228ENST00000498814 ELP3Q9H9T3 547 aa18.62■□□□□ 0.57
CPNE1-228ENST00000498814 CCDC171Q6TFL3 1326 aa18.62■□□□□ 0.57
CPNE1-228ENST00000498814 SPDYE5A6NIY4 337 aa18.61■□□□□ 0.57
CPNE1-228ENST00000498814 FOXP2O15409 715 aa18.61■□□□□ 0.57
CPNE1-228ENST00000498814 AOC2O75106 756 aa18.61■□□□□ 0.57
CPNE1-228ENST00000498814 ZBTB48P10074 688 aaPredicted RBP18.61■□□□□ 0.57
CPNE1-228ENST00000498814 CAP2P40123 477 aa18.61■□□□□ 0.57
CPNE1-228ENST00000498814 TDO2P48775 406 aa18.61■□□□□ 0.57
CPNE1-228ENST00000498814 TATDN1Q6P1N9 297 aa18.61■□□□□ 0.57
CPNE1-228ENST00000498814 ERO1BQ86YB8 467 aa18.61■□□□□ 0.57
CPNE1-228ENST00000498814 SCYL3Q8IZE3 742 aa18.61■□□□□ 0.57
CPNE1-228ENST00000498814 JMYQ8N9B5 988 aa18.61■□□□□ 0.57
CPNE1-228ENST00000498814 PHIPQ8WWQ0 1821 aa18.6■□□□□ 0.57
CPNE1-228ENST00000498814 CYP2D7A0A087X1C5 515 aa18.6■□□□□ 0.57
CPNE1-228ENST00000498814 EVX2Q03828 476 aa18.6■□□□□ 0.57
CPNE1-228ENST00000498814 RRP1BQ14684 758 aaKnown RBP18.6■□□□□ 0.57
CPNE1-228ENST00000498814 ALX1Q15699 326 aa18.6■□□□□ 0.57
CPNE1-228ENST00000498814 VPS53Q5VIR6 699 aa18.6■□□□□ 0.57
CPNE1-228ENST00000498814 RUFY2Q8WXA3 655 aa18.6■□□□□ 0.57
CPNE1-228ENST00000498814 OPTNQ96CV9 577 aa18.6■□□□□ 0.57
CPNE1-228ENST00000498814 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.6■□□□□ 0.57
CPNE1-228ENST00000498814 RAD50Q92878 1312 aa18.59■□□□□ 0.57
CPNE1-228ENST00000498814 HSPD1P10809 573 aaKnown RBP18.59■□□□□ 0.57
CPNE1-228ENST00000498814 PPATQ06203 517 aa18.59■□□□□ 0.57
CPNE1-228ENST00000498814 ZIC5Q96T25 663 aa18.59■□□□□ 0.57
CPNE1-228ENST00000498814 NAPBQ9H115 298 aa18.59■□□□□ 0.57
CPNE1-228ENST00000498814 PICK1Q9NRD5 415 aa18.59■□□□□ 0.57
CPNE1-228ENST00000498814 SWAP70Q9UH65 585 aa18.59■□□□□ 0.57
CPNE1-228ENST00000498814 SHMT1P34896 483 aa18.58■□□□□ 0.56
CPNE1-228ENST00000498814 GJA5P36382 358 aa18.58■□□□□ 0.56
CPNE1-228ENST00000498814 KIF23Q02241 960 aaPredicted RBP18.58■□□□□ 0.56
CPNE1-228ENST00000498814 REM2Q8IYK8 340 aaPredicted RBP18.58■□□□□ 0.56
CPNE1-228ENST00000498814 CNKSR2Q8WXI2 1034 aa18.58■□□□□ 0.56
CPNE1-228ENST00000498814 DYNLL2Q96FJ2 89 aa18.58■□□□□ 0.56
CPNE1-228ENST00000498814 OTUD5Q96G74 571 aa18.58■□□□□ 0.56
CPNE1-228ENST00000498814 GINM1Q9NU53 330 aa18.58■□□□□ 0.56
CPNE1-228ENST00000498814 ROBO3Q96MS0 1386 aa18.57■□□□□ 0.56
CPNE1-228ENST00000498814 ZMYM6O95789 1325 aa18.57■□□□□ 0.56
CPNE1-228ENST00000498814 MINDY4BA8MYZ0 360 aa18.57■□□□□ 0.56
CPNE1-228ENST00000498814 SMIM22K7EJ46 135 aa18.57■□□□□ 0.56
CPNE1-228ENST00000498814 PTPRAP18433 802 aa18.57■□□□□ 0.56
CPNE1-228ENST00000498814 MKRN3Q13064 507 aaKnown RBP18.57■□□□□ 0.56
CPNE1-228ENST00000498814 PPIL2Q13356 520 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms