RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.47■□□□□ 0.71
HDAC6-236ENST00000498808 FAM163AQ96GL9 167 aaPredicted RBP19.47■□□□□ 0.71
HDAC6-236ENST00000498808 SIL1Q9H173 461 aa19.47■□□□□ 0.71
HDAC6-236ENST00000498808 ASCC2Q9H1I8 757 aaPredicted RBP19.47■□□□□ 0.71
HDAC6-236ENST00000498808 ZBTB22O15209 634 aa19.46■□□□□ 0.71
HDAC6-236ENST00000498808 COL6A1P12109 1028 aa19.46■□□□□ 0.71
HDAC6-236ENST00000498808 DZIP1Q86YF9 867 aaKnown RBP19.46■□□□□ 0.71
HDAC6-236ENST00000498808 ZGPATQ8N5A5 531 aaKnown RBP19.46■□□□□ 0.71
HDAC6-236ENST00000498808 ZNF280CQ8ND82 737 aa19.46■□□□□ 0.71
HDAC6-236ENST00000498808 GUCD1Q96NT3 240 aa19.46■□□□□ 0.71
HDAC6-236ENST00000498808 MORF4L1Q9UBU8 362 aa19.46■□□□□ 0.71
HDAC6-236ENST00000498808 PRKAR2AP13861 404 aaKnown RBP19.45■□□□□ 0.7
HDAC6-236ENST00000498808 CYP2B6P20813 491 aa19.45■□□□□ 0.7
HDAC6-236ENST00000498808 ADORA1P30542 326 aa19.45■□□□□ 0.7
HDAC6-236ENST00000498808 RHBDL3P58872 404 aa19.45■□□□□ 0.7
HDAC6-236ENST00000498808 CCDC102BQ68D86 513 aa19.45■□□□□ 0.7
HDAC6-236ENST00000498808 OSBPL5Q9H0X9 879 aaPredicted RBP19.45■□□□□ 0.7
HDAC6-236ENST00000498808 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.45■□□□□ 0.7
HDAC6-236ENST00000498808 MRS2Q9HD23 443 aa19.45■□□□□ 0.7
HDAC6-236ENST00000498808 CEP126Q9P2H0 1117 aa19.45■□□□□ 0.7
HDAC6-236ENST00000498808 ABCF2Q9UG63 623 aa19.45■□□□□ 0.7
HDAC6-236ENST00000498808 COL2A1P02458 1487 aaPredicted RBP19.45■□□□□ 0.7
HDAC6-236ENST00000498808 MROH7-TTC4A0A0A0MT08 1334 aa19.45■□□□□ 0.7
HDAC6-236ENST00000498808 PTPRCP08575 1304 aa19.45■□□□□ 0.7
HDAC6-236ENST00000498808 POTEB2H3BUK9 544 aa19.44■□□□□ 0.7
HDAC6-236ENST00000498808 CIAO1O76071 339 aa19.44■□□□□ 0.7
HDAC6-236ENST00000498808 PABPC4Q13310 644 aaKnown RBP eCLIP19.44■□□□□ 0.7
HDAC6-236ENST00000498808 RASGRF1Q13972 1273 aa19.44■□□□□ 0.7
HDAC6-236ENST00000498808 RRP1BQ14684 758 aaKnown RBP19.44■□□□□ 0.7
HDAC6-236ENST00000498808 LRRC26Q2I0M4 334 aa19.44■□□□□ 0.7
HDAC6-236ENST00000498808 SH3D19Q5HYK7 790 aa19.44■□□□□ 0.7
HDAC6-236ENST00000498808 FBXO3Q9UK99 471 aa19.44■□□□□ 0.7
HDAC6-236ENST00000498808 VCANP13611 3396 aa19.44■□□□□ 0.7
HDAC6-236ENST00000498808 PEX10O60683 326 aa19.43■□□□□ 0.7
HDAC6-236ENST00000498808 MDM2Q00987 491 aaPredicted RBP19.43■□□□□ 0.7
HDAC6-236ENST00000498808 SLF2Q8IX21 1173 aa19.43■□□□□ 0.7
HDAC6-236ENST00000498808 ZNF384Q8TF68 577 aa19.43■□□□□ 0.7
HDAC6-236ENST00000498808 GPR75-ASB3A0A0A6YYF3 556 aa19.42■□□□□ 0.7
HDAC6-236ENST00000498808 NPM3O75607 178 aaKnown RBP19.42■□□□□ 0.7
HDAC6-236ENST00000498808 CAP2P40123 477 aa19.42■□□□□ 0.7
HDAC6-236ENST00000498808 FAM109BQ6ICB4 259 aaPredicted RBP19.42■□□□□ 0.7
HDAC6-236ENST00000498808 TBC1D2Q9BYX2 928 aa19.42■□□□□ 0.7
HDAC6-236ENST00000498808 PDS5AQ29RF7 1337 aaKnown RBP19.42■□□□□ 0.7
HDAC6-236ENST00000498808 XRCC5P13010 732 aaKnown RBP19.41■□□□□ 0.7
HDAC6-236ENST00000498808 MECOMQ03112 1051 aa19.41■□□□□ 0.7
HDAC6-236ENST00000498808 CACNB2Q08289 660 aaPredicted RBP19.41■□□□□ 0.7
HDAC6-236ENST00000498808 LHX8Q68G74 356 aa19.41■□□□□ 0.7
HDAC6-236ENST00000498808 NUDT12Q9BQG2 462 aa19.41■□□□□ 0.7
HDAC6-236ENST00000498808 TXNRD2Q9NNW7 524 aa19.41■□□□□ 0.7
HDAC6-236ENST00000498808 USP17L5A8MUK1 530 aa19.4■□□□□ 0.7
HDAC6-236ENST00000498808 CCND3P30281 292 aaPredicted RBP19.4■□□□□ 0.7
HDAC6-236ENST00000498808 IL15P40933 162 aaPredicted RBP19.4■□□□□ 0.7
HDAC6-236ENST00000498808 SOCS4Q8WXH5 440 aa19.4■□□□□ 0.7
HDAC6-236ENST00000498808 FAM161BQ96MY7 647 aa19.4■□□□□ 0.7
HDAC6-236ENST00000498808 P2RX7Q99572 595 aaKnown RBP19.4■□□□□ 0.7
HDAC6-236ENST00000498808 PA2G4Q9UQ80 394 aaKnown RBP19.4■□□□□ 0.7
HDAC6-236ENST00000498808 MAST2Q6P0Q8 1798 aa19.39■□□□□ 0.7
HDAC6-236ENST00000498808 FRMPD3Q5JV73 1810 aa19.39■□□□□ 0.7
HDAC6-236ENST00000498808 IRX3P78415 501 aaPredicted RBP19.39■□□□□ 0.69
HDAC6-236ENST00000498808 CCL14Q16627 93 aa19.39■□□□□ 0.69
HDAC6-236ENST00000498808 SPTY2D1Q68D10 685 aaPredicted RBP19.39■□□□□ 0.69
HDAC6-236ENST00000498808 SSH1Q8WYL5 1049 aa19.39■□□□□ 0.69
HDAC6-236ENST00000498808 USP6NLQ92738 828 aa19.39■□□□□ 0.69
HDAC6-236ENST00000498808 SIPA1L1O43166 1804 aa19.39■□□□□ 0.69
HDAC6-236ENST00000498808 ZKSCAN1P17029 563 aaPredicted RBP19.38■□□□□ 0.69
HDAC6-236ENST00000498808 HOXA7P31268 230 aaPredicted RBP19.38■□□□□ 0.69
HDAC6-236ENST00000498808 MTMR2Q13614 643 aa19.38■□□□□ 0.69
HDAC6-236ENST00000498808 AS3MTQ9HBK9 375 aa19.38■□□□□ 0.69
HDAC6-236ENST00000498808 LAMA2P24043 3122 aaKnown RBP19.38■□□□□ 0.69
HDAC6-236ENST00000498808 SPTBN5Q9NRC6 3674 aaKnown RBP19.37■□□□□ 0.69
HDAC6-236ENST00000498808 BACE1P56817 501 aa19.37■□□□□ 0.69
HDAC6-236ENST00000498808 TIMM10P62072 90 aa19.37■□□□□ 0.69
HDAC6-236ENST00000498808 HERVK_113P62684 666 aa19.37■□□□□ 0.69
HDAC6-236ENST00000498808 ERICH6Q7L0X2 663 aa19.37■□□□□ 0.69
HDAC6-236ENST00000498808 TRMT44Q8IYL2 757 aaKnown RBP19.37■□□□□ 0.69
HDAC6-236ENST00000498808 GPRC5AQ8NFJ5 357 aa19.37■□□□□ 0.69
HDAC6-236ENST00000498808 WDR18Q9BV38 432 aa19.37■□□□□ 0.69
HDAC6-236ENST00000498808 PORCNQ9H237 461 aa19.37■□□□□ 0.69
HDAC6-236ENST00000498808 RBPJLQ9UBG7 517 aa19.37■□□□□ 0.69
HDAC6-236ENST00000498808 EYSQ5T1H1 3165 aa19.37■□□□□ 0.69
HDAC6-236ENST00000498808 ZNF521Q96K83 1311 aa19.36■□□□□ 0.69
HDAC6-236ENST00000498808 UBTFL1P0CB47 393 aaPredicted RBP19.36■□□□□ 0.69
HDAC6-236ENST00000498808 JAG1P78504 1218 aa19.36■□□□□ 0.69
HDAC6-236ENST00000498808 Q3C1V9 767 aa19.36■□□□□ 0.69
HDAC6-236ENST00000498808 MAPK4P31152 587 aa19.35■□□□□ 0.69
HDAC6-236ENST00000498808 PDE3AQ14432 1141 aa19.35■□□□□ 0.69
HDAC6-236ENST00000498808 MORN1Q5T089 497 aa19.35■□□□□ 0.69
HDAC6-236ENST00000498808 POTEEQ6S8J3 1075 aa19.35■□□□□ 0.69
HDAC6-236ENST00000498808 GPR142Q7Z601 462 aa19.35■□□□□ 0.69
HDAC6-236ENST00000498808 NSUN4Q96CB9 384 aaKnown RBP19.35■□□□□ 0.69
HDAC6-236ENST00000498808 COPRSQ9NQ92 184 aa19.35■□□□□ 0.69
HDAC6-236ENST00000498808 HERC5Q9UII4 1024 aaKnown RBP19.35■□□□□ 0.69
HDAC6-236ENST00000498808 MAP4K4O95819 1239 aaPredicted RBP19.34■□□□□ 0.69
HDAC6-236ENST00000498808 RGS2P41220 211 aa19.34■□□□□ 0.69
HDAC6-236ENST00000498808 ERVK-9P63128 1117 aa19.34■□□□□ 0.69
HDAC6-236ENST00000498808 ERVK-24P63145 666 aa19.34■□□□□ 0.69
HDAC6-236ENST00000498808 SHROOM1Q2M3G4 852 aaPredicted RBP19.34■□□□□ 0.69
HDAC6-236ENST00000498808 PI16Q6UXB8 463 aa19.34■□□□□ 0.69
HDAC6-236ENST00000498808 XAGE2Q96GT9 111 aa19.34■□□□□ 0.69
HDAC6-236ENST00000498808 APBA2Q99767 749 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms