RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 ABCB6Q9NP58 842 aa6.6□□□□□ -1.35
SOX2-OT-218ENST00000498731 SNRKQ9NRH2 765 aa6.6□□□□□ -1.35
SOX2-OT-218ENST00000498731 FAM169AQ9Y6X4 670 aa6.6□□□□□ -1.35
SOX2-OT-218ENST00000498731 A0A1B0GVG6 124 aa6.59□□□□□ -1.35
SOX2-OT-218ENST00000498731 PPP1R12BO60237 982 aaPredicted RBP6.59□□□□□ -1.35
SOX2-OT-218ENST00000498731 RPS6KA5O75582 802 aa6.59□□□□□ -1.35
SOX2-OT-218ENST00000498731 RPSAP08865 295 aaKnown RBP6.59□□□□□ -1.35
SOX2-OT-218ENST00000498731 AK2P54819 239 aa6.59□□□□□ -1.35
SOX2-OT-218ENST00000498731 TCEAL1Q15170 157 aa6.59□□□□□ -1.35
SOX2-OT-218ENST00000498731 DDB1Q16531 1140 aa6.59□□□□□ -1.35
SOX2-OT-218ENST00000498731 MYSM1Q5VVJ2 828 aa6.59□□□□□ -1.35
SOX2-OT-218ENST00000498731 LMBR1LQ6UX01 489 aa6.59□□□□□ -1.35
SOX2-OT-218ENST00000498731 RSRC2Q7L4I2 434 aaKnown RBP6.59□□□□□ -1.35
SOX2-OT-218ENST00000498731 ADAMTS19Q8TE59 1207 aa6.59□□□□□ -1.35
SOX2-OT-218ENST00000498731 ARFGAP3Q9NP61 516 aa6.59□□□□□ -1.35
SOX2-OT-218ENST00000498731 BABAM1Q9NWV8 329 aa6.59□□□□□ -1.35
SOX2-OT-218ENST00000498731 PUF60Q9UHX1 559 aaKnown RBP6.59□□□□□ -1.35
SOX2-OT-218ENST00000498731 WWC3Q9ULE0 1092 aa6.59□□□□□ -1.35
SOX2-OT-218ENST00000498731 PCDH11XQ9BZA7 1347 aa6.59□□□□□ -1.35
SOX2-OT-218ENST00000498731 PCDH11YQ9BZA8 1340 aa6.59□□□□□ -1.35
SOX2-OT-218ENST00000498731 IVLP07476 585 aa6.59□□□□□ -1.35
SOX2-OT-218ENST00000498731 FNTAP49354 379 aa6.59□□□□□ -1.35
SOX2-OT-218ENST00000498731 SPRED3Q2MJR0 410 aa6.59□□□□□ -1.35
SOX2-OT-218ENST00000498731 CCDC158Q5M9N0 1113 aa6.59□□□□□ -1.35
SOX2-OT-218ENST00000498731 CCDC181Q5TID7 509 aa6.59□□□□□ -1.35
SOX2-OT-218ENST00000498731 RPUSD2Q8IZ73 545 aaKnown RBP6.59□□□□□ -1.35
SOX2-OT-218ENST00000498731 DHX58Q96C10 678 aa6.59□□□□□ -1.35
SOX2-OT-218ENST00000498731 ETAA1Q9NY74 926 aa6.59□□□□□ -1.35
SOX2-OT-218ENST00000498731 CAPN7Q9Y6W3 813 aa6.59□□□□□ -1.35
SOX2-OT-218ENST00000498731 MAP3K13O43283 966 aa6.59□□□□□ -1.35
SOX2-OT-218ENST00000498731 GJB2P29033 226 aa6.59□□□□□ -1.35
SOX2-OT-218ENST00000498731 THEMIS2Q5TEJ8 643 aa6.59□□□□□ -1.35
SOX2-OT-218ENST00000498731 BICDL1Q6ZP65 573 aa6.59□□□□□ -1.35
SOX2-OT-218ENST00000498731 GIMAP7Q8NHV1 300 aa6.59□□□□□ -1.35
SOX2-OT-218ENST00000498731 DDX11Q96FC9 970 aa6.59□□□□□ -1.35
SOX2-OT-218ENST00000498731 ZNF594Q96JF6 807 aaPredicted RBP6.59□□□□□ -1.35
SOX2-OT-218ENST00000498731 TMEM165Q9HC07 324 aa6.59□□□□□ -1.35
SOX2-OT-218ENST00000498731 DDX20Q9UHI6 824 aaKnown RBP6.59□□□□□ -1.35
SOX2-OT-218ENST00000498731 CTDP1Q9Y5B0 961 aaPredicted RBP6.59□□□□□ -1.35
SOX2-OT-218ENST00000498731 MEGF6O75095 1541 aa6.59□□□□□ -1.36
SOX2-OT-218ENST00000498731 NWD1Q149M9 1564 aa6.59□□□□□ -1.36
SOX2-OT-218ENST00000498731 CEMIPQ8WUJ3 1361 aa6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 PPFIA3O75145 1194 aa6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 ETF1P62495 437 aaKnown RBP6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 CEBPZQ03701 1054 aaKnown RBP6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 TMEM62Q0P6H9 643 aa6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 R3HDM1Q15032 1099 aaKnown RBP6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 RAVER1Q8IY67 606 aaKnown RBP6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 CCDC26Q8TAB7 109 aa6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 EDC3Q96F86 508 aaKnown RBP6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 INTS4Q96HW7 963 aaKnown RBP6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 FSD1Q9BTV5 496 aa6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 REPIN1Q9BWE0 567 aaKnown RBP6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 TOPAZ1Q8N9V7 1692 aa6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 RGS12O14924 1447 aa6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 ADCY9O60503 1353 aa6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 VWA3AA6NCI4 1184 aa6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 SYF2O95926 243 aaKnown RBP6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 ABL1P00519 1130 aa6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 HOXB7P09629 217 aa6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 E2F5Q15329 346 aa6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 ACCSLQ4AC99 568 aa6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 KIF6Q6ZMV9 814 aa6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 TMC6Q7Z403 805 aa6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 NBPF5PQ86XG9 351 aaPredicted RBP6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 SDR16C5Q8N3Y7 309 aa6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 TTC30BQ8N4P2 665 aa6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 OTUD6BQ8N6M0 293 aa6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 DHX38Q92620 1227 aaKnown RBP6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 CCDC102AQ96A19 550 aa6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 FAM89AQ96GI7 184 aa6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 TCEANC2Q96MN5 208 aa6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 ARGLU1Q9NWB6 273 aaPredicted RBP6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 LMCD1Q9NZU5 365 aa6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 GOLGA6CA6NDK9 693 aa6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 GOLGA6BA6NDN3 693 aa6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 KIF2AO00139 706 aaPredicted RBP6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 SSBP05455 408 aaKnown RBP eCLIP6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 IGKV5-2P06315 115 aa6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 GOLGA6DP0CG33 693 aa6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 CHMLP26374 656 aa6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 PPP4CP60510 307 aa6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 EPHA10Q5JZY3 1008 aa6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 TEX11Q8IYF3 940 aa6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 CNTROBQ8N137 903 aa6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 AOPEPQ8N6M6 819 aa6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 DPF2Q92785 391 aa6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 ESYT1Q9BSJ8 1104 aa6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 KAT14Q9H8E8 782 aa6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 GOLGA6AQ9NYA3 693 aa6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.58□□□□□ -1.36
SOX2-OT-218ENST00000498731 COL16A1Q07092 1604 aaPredicted RBP6.57□□□□□ -1.36
SOX2-OT-218ENST00000498731 NEURL1BA8MQ27 555 aa6.57□□□□□ -1.36
SOX2-OT-218ENST00000498731 EFCAB8A8MWE9 144 aa6.57□□□□□ -1.36
SOX2-OT-218ENST00000498731 ALDH1L1O75891 902 aa6.57□□□□□ -1.36
SOX2-OT-218ENST00000498731 STARD3NLO95772 234 aa6.57□□□□□ -1.36
SOX2-OT-218ENST00000498731 RHOXF2BP0C7M4 288 aa6.57□□□□□ -1.36
SOX2-OT-218ENST00000498731 GCFC2P16383 781 aaKnown RBP6.57□□□□□ -1.36
SOX2-OT-218ENST00000498731 BAG6P46379 1132 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms