RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-222ENST00000498658 INPP5BP32019 993 aa12.72□□□□□ -0.37
FXR1-222ENST00000498658 GJA5P36382 358 aa12.72□□□□□ -0.37
FXR1-222ENST00000498658 USP5P45974 858 aa12.72□□□□□ -0.37
FXR1-222ENST00000498658 MIGA1Q8NAN2 632 aa12.72□□□□□ -0.37
FXR1-222ENST00000498658 ZCCHC17Q9NP64 241 aaKnown RBP12.72□□□□□ -0.37
FXR1-222ENST00000498658 SUPT16HQ9Y5B9 1047 aaKnown RBP12.72□□□□□ -0.37
FXR1-222ENST00000498658 ZNF532Q9HCE3 1301 aa12.71□□□□□ -0.37
FXR1-222ENST00000498658 CCL15-CCL14A0A0B4J2E2 113 aa12.71□□□□□ -0.37
FXR1-222ENST00000498658 UBE3CQ15386 1083 aa12.71□□□□□ -0.37
FXR1-222ENST00000498658 CCL15Q16663 113 aa12.71□□□□□ -0.37
FXR1-222ENST00000498658 MAPKAPK5Q8IW41 473 aa12.71□□□□□ -0.37
FXR1-222ENST00000498658 SCYL3Q8IZE3 742 aa12.71□□□□□ -0.37
FXR1-222ENST00000498658 MS4A4AQ96JQ5 239 aa12.71□□□□□ -0.37
FXR1-222ENST00000498658 TBC1D2Q9BYX2 928 aa12.71□□□□□ -0.37
FXR1-222ENST00000498658 CRNKL1Q9BZJ0 848 aaKnown RBP12.71□□□□□ -0.37
FXR1-222ENST00000498658 FOCADQ5VW36 1801 aa12.71□□□□□ -0.38
FXR1-222ENST00000498658 CXCL11O14625 94 aa12.7□□□□□ -0.38
FXR1-222ENST00000498658 IRF6O14896 467 aa12.7□□□□□ -0.38
FXR1-222ENST00000498658 GLRX3O76003 335 aaKnown RBP12.7□□□□□ -0.38
FXR1-222ENST00000498658 TBC1D8O95759 1140 aa12.7□□□□□ -0.38
FXR1-222ENST00000498658 ADD2P35612 726 aa12.7□□□□□ -0.38
FXR1-222ENST00000498658 DYNLL1P63167 89 aaKnown RBP12.7□□□□□ -0.38
FXR1-222ENST00000498658 ANKRD45Q5TZF3 282 aa12.7□□□□□ -0.38
FXR1-222ENST00000498658 TTC6Q86TZ1 520 aa12.7□□□□□ -0.38
FXR1-222ENST00000498658 CRACR2BQ8N4Y2 399 aaPredicted RBP12.7□□□□□ -0.38
FXR1-222ENST00000498658 RIOK1Q9BRS2 568 aaKnown RBP12.7□□□□□ -0.38
FXR1-222ENST00000498658 GINM1Q9NU53 330 aa12.7□□□□□ -0.38
FXR1-222ENST00000498658 TAOK2Q9UL54 1235 aa12.7□□□□□ -0.38
FXR1-222ENST00000498658 TCRBV5S4A2TA0A5A2 114 aa12.69□□□□□ -0.38
FXR1-222ENST00000498658 GPR25O00155 361 aa12.69□□□□□ -0.38
FXR1-222ENST00000498658 IGF2BP3O00425 579 aaKnown RBP eCLIP12.69□□□□□ -0.38
FXR1-222ENST00000498658 ZFYP08048 801 aaPredicted RBP12.69□□□□□ -0.38
FXR1-222ENST00000498658 MX1P20591 662 aa12.69□□□□□ -0.38
FXR1-222ENST00000498658 IFFO2Q5TF58 517 aa12.69□□□□□ -0.38
FXR1-222ENST00000498658 METTL16Q86W50 562 aaKnown RBP12.69□□□□□ -0.38
FXR1-222ENST00000498658 KBTBD3Q8NAB2 608 aa12.69□□□□□ -0.38
FXR1-222ENST00000498658 EDC3Q96F86 508 aaKnown RBP12.69□□□□□ -0.38
FXR1-222ENST00000498658 DDRGK1Q96HY6 314 aa12.69□□□□□ -0.38
FXR1-222ENST00000498658 PALD1Q9ULE6 856 aa12.69□□□□□ -0.38
FXR1-222ENST00000498658 KCNH4Q9UQ05 1017 aa12.69□□□□□ -0.38
FXR1-222ENST00000498658 ZHX2Q9Y6X8 837 aa12.69□□□□□ -0.38
FXR1-222ENST00000498658 CASP8AP2Q9UKL3 1982 aa12.69□□□□□ -0.38
FXR1-222ENST00000498658 CDK5RAP2Q96SN8 1893 aa12.68□□□□□ -0.38
FXR1-222ENST00000498658 PTPRAP18433 802 aa12.68□□□□□ -0.38
FXR1-222ENST00000498658 CAP2P40123 477 aa12.68□□□□□ -0.38
FXR1-222ENST00000498658 FASTKD5Q7L8L6 764 aaKnown RBP12.68□□□□□ -0.38
FXR1-222ENST00000498658 EXOC6Q8TAG9 804 aa12.68□□□□□ -0.38
FXR1-222ENST00000498658 BRI3BPQ8WY22 251 aa12.68□□□□□ -0.38
FXR1-222ENST00000498658 PTPN18Q99952 460 aa12.68□□□□□ -0.38
FXR1-222ENST00000498658 EHD4Q9H223 541 aa12.68□□□□□ -0.38
FXR1-222ENST00000498658 ZFYVE28Q9HCC9 887 aa12.68□□□□□ -0.38
FXR1-222ENST00000498658 ATP8A2Q9NTI2 1148 aa12.68□□□□□ -0.38
FXR1-222ENST00000498658 DOCK1Q14185 1865 aa12.68□□□□□ -0.38
FXR1-222ENST00000498658 MYH7P12883 1935 aa12.67□□□□□ -0.38
FXR1-222ENST00000498658 FKTNO75072 461 aa12.67□□□□□ -0.38
FXR1-222ENST00000498658 ASNSP08243 561 aa12.67□□□□□ -0.38
FXR1-222ENST00000498658 TAF1CQ15572 869 aaPredicted RBP12.67□□□□□ -0.38
FXR1-222ENST00000498658 PKN2Q16513 984 aaKnown RBP12.67□□□□□ -0.38
FXR1-222ENST00000498658 ANKRD23Q86SG2 305 aa12.67□□□□□ -0.38
FXR1-222ENST00000498658 SMC5Q8IY18 1101 aa12.67□□□□□ -0.38
FXR1-222ENST00000498658 AMOTL1Q8IY63 956 aa12.67□□□□□ -0.38
FXR1-222ENST00000498658 ZNF296Q8WUU4 475 aaPredicted RBP12.67□□□□□ -0.38
FXR1-222ENST00000498658 AS3MTQ9HBK9 375 aa12.67□□□□□ -0.38
FXR1-222ENST00000498658 SAP30BPQ9UHR5 308 aaKnown RBP12.67□□□□□ -0.38
FXR1-222ENST00000498658 SERPINB13Q9UIV8 391 aa12.67□□□□□ -0.38
FXR1-222ENST00000498658 AFG3L2Q9Y4W6 797 aa12.67□□□□□ -0.38
FXR1-222ENST00000498658 MYH1P12882 1939 aa12.66□□□□□ -0.38
FXR1-222ENST00000498658 A0A0G2JLL6 359 aaPredicted RBP12.66□□□□□ -0.38
FXR1-222ENST00000498658 USP17L5A8MUK1 530 aa12.66□□□□□ -0.38
FXR1-222ENST00000498658 POLR3DP05423 398 aaPredicted RBP12.66□□□□□ -0.38
FXR1-222ENST00000498658 CRHR2Q13324 411 aa12.66□□□□□ -0.38
FXR1-222ENST00000498658 ARHGEF6Q15052 776 aa12.66□□□□□ -0.38
FXR1-222ENST00000498658 PRRT2Q7Z6L0 340 aaPredicted RBP12.66□□□□□ -0.38
FXR1-222ENST00000498658 CTU1Q7Z7A3 348 aaKnown RBP12.66□□□□□ -0.38
FXR1-222ENST00000498658 TICAM2Q86XR7 235 aa12.66□□□□□ -0.38
FXR1-222ENST00000498658 PI4K2BQ8TCG2 481 aa12.66□□□□□ -0.38
FXR1-222ENST00000498658 MCM9Q9NXL9 1143 aa12.66□□□□□ -0.38
FXR1-222ENST00000498658 BTBD19C9JJ37 291 aa12.65□□□□□ -0.38
FXR1-222ENST00000498658 RNF113AO15541 343 aaKnown RBP12.65□□□□□ -0.38
FXR1-222ENST00000498658 MBD4O95243 580 aa12.65□□□□□ -0.38
FXR1-222ENST00000498658 DGKZQ13574 1117 aa12.65□□□□□ -0.38
FXR1-222ENST00000498658 FAM43AQ8N2R8 423 aa12.65□□□□□ -0.38
FXR1-222ENST00000498658 LCORLQ8N3X6 602 aa12.65□□□□□ -0.38
FXR1-222ENST00000498658 ZNF280CQ8ND82 737 aa12.65□□□□□ -0.38
FXR1-222ENST00000498658 APPBP2Q92624 585 aa12.65□□□□□ -0.38
FXR1-222ENST00000498658 ERO1AQ96HE7 468 aa12.65□□□□□ -0.38
FXR1-222ENST00000498658 ARMT1Q9H993 441 aa12.65□□□□□ -0.38
FXR1-222ENST00000498658 DCP1AQ9NPI6 582 aaPredicted RBP12.65□□□□□ -0.38
FXR1-222ENST00000498658 STAP2Q9UGK3 403 aa12.65□□□□□ -0.38
FXR1-222ENST00000498658 SLC45A1Q9Y2W3 748 aa12.65□□□□□ -0.38
FXR1-222ENST00000498658 FAM196BA6NMK8 535 aa12.64□□□□□ -0.39
FXR1-222ENST00000498658 TLR2O60603 784 aa12.64□□□□□ -0.39
FXR1-222ENST00000498658 GNAT2P19087 354 aa12.64□□□□□ -0.39
FXR1-222ENST00000498658 SP3Q02447 781 aa12.64□□□□□ -0.39
FXR1-222ENST00000498658 TSHZ3Q63HK5 1081 aa12.64□□□□□ -0.39
FXR1-222ENST00000498658 TATDN1Q6P1N9 297 aa12.64□□□□□ -0.39
FXR1-222ENST00000498658 CHD1LQ86WJ1 897 aa12.64□□□□□ -0.39
FXR1-222ENST00000498658 PARK7Q99497 189 aaKnown RBP12.64□□□□□ -0.39
FXR1-222ENST00000498658 SWAP70Q9UH65 585 aa12.64□□□□□ -0.39
FXR1-222ENST00000498658 SALL3Q9BXA9 1300 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms