RNA–Protein interactions for RNA: ENST00000498641.1

GPATCH4-209, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-209ENST00000498641 ZBTB12Q9Y330 459 aaPredicted RBP8.35□□□□□ -1.07
GPATCH4-209ENST00000498641 TSPY2A6NKD2 308 aa8.34□□□□□ -1.07
GPATCH4-209ENST00000498641 CPLX1O14810 134 aa8.34□□□□□ -1.07
GPATCH4-209ENST00000498641 DHX16O60231 1041 aaKnown RBP8.34□□□□□ -1.07
GPATCH4-209ENST00000498641 WDHD1O75717 1129 aaPredicted RBP8.34□□□□□ -1.07
GPATCH4-209ENST00000498641 HLA-DOAP06340 250 aa8.34□□□□□ -1.07
GPATCH4-209ENST00000498641 FGRP09769 529 aa8.34□□□□□ -1.07
GPATCH4-209ENST00000498641 GJB2P29033 226 aa8.34□□□□□ -1.07
GPATCH4-209ENST00000498641 LIFRP42702 1097 aa8.34□□□□□ -1.07
GPATCH4-209ENST00000498641 PLCD1P51178 756 aa8.34□□□□□ -1.07
GPATCH4-209ENST00000498641 EVCP57679 992 aa8.34□□□□□ -1.07
GPATCH4-209ENST00000498641 FAM47AQ5JRC9 791 aa8.34□□□□□ -1.07
GPATCH4-209ENST00000498641 RAB11FIP4Q86YS3 637 aa8.34□□□□□ -1.07
GPATCH4-209ENST00000498641 ZSCAN29Q8IWY8 852 aaPredicted RBP8.34□□□□□ -1.07
GPATCH4-209ENST00000498641 NKX2-3Q8TAU0 364 aa8.34□□□□□ -1.07
GPATCH4-209ENST00000498641 IGDCC4Q8TDY8 1250 aa8.34□□□□□ -1.07
GPATCH4-209ENST00000498641 ZSCAN10Q96SZ4 725 aaPredicted RBP8.34□□□□□ -1.07
GPATCH4-209ENST00000498641 GMLQ99445 158 aa8.34□□□□□ -1.07
GPATCH4-209ENST00000498641 SYT17Q9BSW7 474 aa8.34□□□□□ -1.07
GPATCH4-209ENST00000498641 MTA3Q9BTC8 594 aa8.34□□□□□ -1.07
GPATCH4-209ENST00000498641 TDRD3Q9H7E2 651 aaKnown RBP8.34□□□□□ -1.07
GPATCH4-209ENST00000498641 LY9Q9HBG7 655 aa8.34□□□□□ -1.07
GPATCH4-209ENST00000498641 TMOD2Q9NZR1 351 aa8.34□□□□□ -1.07
GPATCH4-209ENST00000498641 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.34□□□□□ -1.07
GPATCH4-209ENST00000498641 PCDHAC2Q9Y5I4 1007 aa8.34□□□□□ -1.07
GPATCH4-209ENST00000498641 SLC12A7Q9Y666 1083 aa8.34□□□□□ -1.07
GPATCH4-209ENST00000498641 GJA3Q9Y6H8 435 aa8.34□□□□□ -1.07
GPATCH4-209ENST00000498641 ZBTB43O43298 467 aa8.33□□□□□ -1.08
GPATCH4-209ENST00000498641 TSPY3P0CV98 308 aa8.33□□□□□ -1.08
GPATCH4-209ENST00000498641 TSPY8P0CW00 308 aa8.33□□□□□ -1.08
GPATCH4-209ENST00000498641 CDK8P49336 464 aa8.33□□□□□ -1.08
GPATCH4-209ENST00000498641 NT5C2P49902 561 aa8.33□□□□□ -1.08
GPATCH4-209ENST00000498641 METAP2P50579 478 aaKnown RBP eCLIP8.33□□□□□ -1.08
GPATCH4-209ENST00000498641 CACNB3P54284 484 aa8.33□□□□□ -1.08
GPATCH4-209ENST00000498641 TFAP4Q01664 338 aa8.33□□□□□ -1.08
GPATCH4-209ENST00000498641 ST3GAL1Q11201 340 aa8.33□□□□□ -1.08
GPATCH4-209ENST00000498641 SCRN1Q12765 414 aa8.33□□□□□ -1.08
GPATCH4-209ENST00000498641 TCP10Q12799 353 aa8.33□□□□□ -1.08
GPATCH4-209ENST00000498641 RAB3GAP1Q15042 981 aa8.33□□□□□ -1.08
GPATCH4-209ENST00000498641 CCDC178Q5BJE1 867 aa8.33□□□□□ -1.08
GPATCH4-209ENST00000498641 IFIT1BQ5T764 474 aaKnown RBP8.33□□□□□ -1.08
GPATCH4-209ENST00000498641 FOXD4L5Q5VV16 416 aaPredicted RBP8.33□□□□□ -1.08
GPATCH4-209ENST00000498641 FAM184AQ8NB25 1140 aa8.33□□□□□ -1.08
GPATCH4-209ENST00000498641 FOXD4L4Q8WXT5 416 aaPredicted RBP8.33□□□□□ -1.08
GPATCH4-209ENST00000498641 DDX11Q96FC9 970 aa8.33□□□□□ -1.08
GPATCH4-209ENST00000498641 PRMT6Q96LA8 375 aaPredicted RBP8.33□□□□□ -1.08
GPATCH4-209ENST00000498641 LLPHQ9BRT6 129 aaKnown RBP8.33□□□□□ -1.08
GPATCH4-209ENST00000498641 TRIM34Q9BYJ4 488 aa8.33□□□□□ -1.08
GPATCH4-209ENST00000498641 OSBPL5Q9H0X9 879 aaPredicted RBP8.33□□□□□ -1.08
GPATCH4-209ENST00000498641 SENP2Q9HC62 589 aa8.33□□□□□ -1.08
GPATCH4-209ENST00000498641 NCOA5Q9HCD5 579 aaKnown RBP8.33□□□□□ -1.08
GPATCH4-209ENST00000498641 KIAA1551Q9HCM1 1747 aa8.33□□□□□ -1.08
GPATCH4-209ENST00000498641 DDX4Q9NQI0 724 aaKnown RBP8.33□□□□□ -1.08
GPATCH4-209ENST00000498641 TNKSO95271 1327 aa8.32□□□□□ -1.08
GPATCH4-209ENST00000498641 CCDC88AQ3V6T2 1871 aa8.32□□□□□ -1.08
GPATCH4-209ENST00000498641 SPDYE2BA6NHP3 402 aa8.32□□□□□ -1.08
GPATCH4-209ENST00000498641 GOLGA8AA7E2F4 631 aa8.32□□□□□ -1.08
GPATCH4-209ENST00000498641 MYO1BO43795 1136 aa8.32□□□□□ -1.08
GPATCH4-209ENST00000498641 DTNBO60941 627 aa8.32□□□□□ -1.08
GPATCH4-209ENST00000498641 SPDYE6P0CI01 402 aa8.32□□□□□ -1.08
GPATCH4-209ENST00000498641 LMNB1P20700 586 aa8.32□□□□□ -1.08
GPATCH4-209ENST00000498641 PDCP20941 246 aa8.32□□□□□ -1.08
GPATCH4-209ENST00000498641 RPS12P25398 132 aaKnown RBP8.32□□□□□ -1.08
GPATCH4-209ENST00000498641 NFIAQ12857 509 aa8.32□□□□□ -1.08
GPATCH4-209ENST00000498641 NBR1Q14596 966 aa8.32□□□□□ -1.08
GPATCH4-209ENST00000498641 RBM26Q5T8P6 1007 aaKnown RBP8.32□□□□□ -1.08
GPATCH4-209ENST00000498641 LARP1BQ659C4 914 aaKnown RBP8.32□□□□□ -1.08
GPATCH4-209ENST00000498641 CPLX2Q6PUV4 134 aaKnown RBP8.32□□□□□ -1.08
GPATCH4-209ENST00000498641 APOA5Q6Q788 366 aa8.32□□□□□ -1.08
GPATCH4-209ENST00000498641 C16orf86Q6ZW13 317 aa8.32□□□□□ -1.08
GPATCH4-209ENST00000498641 CATIPQ7Z7H3 387 aa8.32□□□□□ -1.08
GPATCH4-209ENST00000498641 SGMS1Q86VZ5 419 aa8.32□□□□□ -1.08
GPATCH4-209ENST00000498641 MICU3Q86XE3 530 aa8.32□□□□□ -1.08
GPATCH4-209ENST00000498641 CCDC144CPQ8IYA2 1237 aa8.32□□□□□ -1.08
GPATCH4-209ENST00000498641 CRACR2BQ8N4Y2 399 aaPredicted RBP8.32□□□□□ -1.08
GPATCH4-209ENST00000498641 SLC44A5Q8NCS7 719 aa8.32□□□□□ -1.08
GPATCH4-209ENST00000498641 NUP133Q8WUM0 1156 aa8.32□□□□□ -1.08
GPATCH4-209ENST00000498641 TNPO1Q92973 898 aaKnown RBP8.32□□□□□ -1.08
GPATCH4-209ENST00000498641 GBP4Q96PP9 640 aa8.32□□□□□ -1.08
GPATCH4-209ENST00000498641 IDI2Q9BXS1 227 aa8.32□□□□□ -1.08
GPATCH4-209ENST00000498641 DHX36Q9H2U1 1008 aaKnown RBP8.32□□□□□ -1.08
GPATCH4-209ENST00000498641 ZNF70Q9UC06 446 aaPredicted RBP8.32□□□□□ -1.08
GPATCH4-209ENST00000498641 KIF3AQ9Y496 699 aa8.32□□□□□ -1.08
GPATCH4-209ENST00000498641 COL4A5P29400 1685 aa8.32□□□□□ -1.08
GPATCH4-209ENST00000498641 ROBO3Q96MS0 1386 aa8.32□□□□□ -1.08
GPATCH4-209ENST00000498641 TIAM2Q8IVF5 1701 aa8.32□□□□□ -1.08
GPATCH4-209ENST00000498641 WDR33Q9C0J8 1336 aaKnown RBP8.31□□□□□ -1.08
GPATCH4-209ENST00000498641 CLRN2A0PK11 232 aa8.31□□□□□ -1.08
GPATCH4-209ENST00000498641 PTPDC1A2A3K4 754 aa8.31□□□□□ -1.08
GPATCH4-209ENST00000498641 TCP10L2B9ZVM9 353 aa8.31□□□□□ -1.08
GPATCH4-209ENST00000498641 FZD9O00144 591 aa8.31□□□□□ -1.08
GPATCH4-209ENST00000498641 STX6O43752 255 aa8.31□□□□□ -1.08
GPATCH4-209ENST00000498641 NMT2O60551 498 aa8.31□□□□□ -1.08
GPATCH4-209ENST00000498641 JAK2O60674 1132 aa8.31□□□□□ -1.08
GPATCH4-209ENST00000498641 ENTPD3O75355 529 aa8.31□□□□□ -1.08
GPATCH4-209ENST00000498641 NPM3O75607 178 aaKnown RBP8.31□□□□□ -1.08
GPATCH4-209ENST00000498641 CDKL5O76039 1030 aa8.31□□□□□ -1.08
GPATCH4-209ENST00000498641 PDIA4P13667 645 aaKnown RBP8.31□□□□□ -1.08
GPATCH4-209ENST00000498641 RXRAP19793 462 aa8.31□□□□□ -1.08
GPATCH4-209ENST00000498641 RASA1P20936 1047 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms