RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 NOSTRINQ8IVI9 506 aa15.37■□□□□ 0.05
GPC1-209ENST00000495100 NOC3LQ8WTT2 800 aaKnown RBP15.37■□□□□ 0.05
GPC1-209ENST00000495100 SRP68Q9UHB9 627 aaKnown RBP15.37■□□□□ 0.05
GPC1-209ENST00000495100 SH2B2O14492 632 aaPredicted RBP15.36■□□□□ 0.05
GPC1-209ENST00000495100 TPM1P09493 284 aa15.36■□□□□ 0.05
GPC1-209ENST00000495100 ESR2Q92731 530 aa15.36■□□□□ 0.05
GPC1-209ENST00000495100 PPP1R13BQ96KQ4 1090 aa15.36■□□□□ 0.05
GPC1-209ENST00000495100 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.36■□□□□ 0.05
GPC1-209ENST00000495100 RIPOR2Q9Y4F9 1068 aa15.36■□□□□ 0.05
GPC1-209ENST00000495100 PATL2C9JE40 543 aaKnown RBP15.36■□□□□ 0.05
GPC1-209ENST00000495100 PDIA4P13667 645 aaKnown RBP15.36■□□□□ 0.05
GPC1-209ENST00000495100 MRPS25P82663 173 aaKnown RBP15.36■□□□□ 0.05
GPC1-209ENST00000495100 PICALMQ13492 652 aa15.36■□□□□ 0.05
GPC1-209ENST00000495100 POSTNQ15063 836 aa15.36■□□□□ 0.05
GPC1-209ENST00000495100 LRP10Q7Z4F1 713 aa15.36■□□□□ 0.05
GPC1-209ENST00000495100 KCNB2Q92953 911 aa15.36■□□□□ 0.05
GPC1-209ENST00000495100 RABEP2Q9H5N1 569 aa15.36■□□□□ 0.05
GPC1-209ENST00000495100 EPB41L4AQ9HCS5 686 aaPredicted RBP15.36■□□□□ 0.05
GPC1-209ENST00000495100 CTNND2Q9UQB3 1225 aa15.36■□□□□ 0.05
GPC1-209ENST00000495100 FBXO38Q6PIJ6 1188 aa15.35■□□□□ 0.05
GPC1-209ENST00000495100 FANCBQ8NB91 859 aa15.35■□□□□ 0.05
GPC1-209ENST00000495100 CAPZA3Q96KX2 299 aa15.35■□□□□ 0.05
GPC1-209ENST00000495100 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.35■□□□□ 0.05
GPC1-209ENST00000495100 TAB2Q9NYJ8 693 aa15.35■□□□□ 0.05
GPC1-209ENST00000495100 UBN2Q6ZU65 1347 aa15.35■□□□□ 0.05
GPC1-209ENST00000495100 IDEP14735 1019 aa15.35■□□□□ 0.05
GPC1-209ENST00000495100 PPARAQ07869 468 aa15.35■□□□□ 0.05
GPC1-209ENST00000495100 DYNLL2Q96FJ2 89 aa15.35■□□□□ 0.05
GPC1-209ENST00000495100 NGLY1Q96IV0 654 aa15.35■□□□□ 0.05
GPC1-209ENST00000495100 BAG1Q99933 345 aaPredicted RBP15.35■□□□□ 0.05
GPC1-209ENST00000495100 SPTLC3Q9NUV7 552 aa15.35■□□□□ 0.05
GPC1-209ENST00000495100 SOS2Q07890 1332 aaPredicted RBP15.35■□□□□ 0.05
GPC1-209ENST00000495100 CMA1P23946 247 aa15.35■□□□□ 0.05
GPC1-209ENST00000495100 KLRK1P26718 216 aa15.35■□□□□ 0.05
GPC1-209ENST00000495100 RAD51AP2Q09MP3 1159 aa15.35■□□□□ 0.05
GPC1-209ENST00000495100 TSR1Q2NL82 804 aaKnown RBP15.35■□□□□ 0.05
GPC1-209ENST00000495100 TMCO3Q6UWJ1 677 aa15.35■□□□□ 0.05
GPC1-209ENST00000495100 ISCA1Q9BUE6 129 aa15.35■□□□□ 0.05
GPC1-209ENST00000495100 ZMYM6O95789 1325 aa15.35■□□□□ 0.05
GPC1-209ENST00000495100 UBR1Q8IWV7 1749 aa15.35■□□□□ 0.05
GPC1-209ENST00000495100 CBFA2T2O43439 604 aa15.34■□□□□ 0.05
GPC1-209ENST00000495100 YEATS4O95619 227 aa15.34■□□□□ 0.05
GPC1-209ENST00000495100 TSGA10IPQ3SY00 556 aa15.34■□□□□ 0.05
GPC1-209ENST00000495100 ENGASEQ8NFI3 743 aa15.34■□□□□ 0.05
GPC1-209ENST00000495100 ZCCHC17Q9NP64 241 aaKnown RBP15.34■□□□□ 0.05
GPC1-209ENST00000495100 DIXDC1Q155Q3 683 aa15.34■□□□□ 0.05
GPC1-209ENST00000495100 ERFEQ4G0M1 354 aa15.34■□□□□ 0.05
GPC1-209ENST00000495100 KRBA2Q6ZNG9 492 aa15.34■□□□□ 0.05
GPC1-209ENST00000495100 MRFAP1L1Q96HT8 127 aa15.34■□□□□ 0.05
GPC1-209ENST00000495100 SLC4A9Q96Q91 983 aa15.34■□□□□ 0.05
GPC1-209ENST00000495100 TEX13AQ9BXU3 409 aaPredicted RBP15.34■□□□□ 0.05
GPC1-209ENST00000495100 KRT23Q9C075 422 aa15.34■□□□□ 0.05
GPC1-209ENST00000495100 FILIP1LQ4L180 1135 aa15.34■□□□□ 0.05
GPC1-209ENST00000495100 SLC44A5Q8NCS7 719 aa15.34■□□□□ 0.05
GPC1-209ENST00000495100 GUCA1BQ9UMX6 200 aa15.34■□□□□ 0.05
GPC1-209ENST00000495100 CLSTN1O94985 981 aa15.33■□□□□ 0.05
GPC1-209ENST00000495100 PRDX5P30044 214 aa15.33■□□□□ 0.05
GPC1-209ENST00000495100 EVCP57679 992 aa15.33■□□□□ 0.05
GPC1-209ENST00000495100 PTPROQ16827 1216 aa15.33■□□□□ 0.05
GPC1-209ENST00000495100 ZNF569Q5MCW4 686 aa15.33■□□□□ 0.05
GPC1-209ENST00000495100 E4F1Q66K89 784 aaPredicted RBP15.33■□□□□ 0.05
GPC1-209ENST00000495100 DHX37Q8IY37 1157 aaKnown RBP15.33■□□□□ 0.05
GPC1-209ENST00000495100 CARD10Q9BWT7 1032 aa15.33■□□□□ 0.05
GPC1-209ENST00000495100 TANGO6Q9C0B7 1094 aa15.33■□□□□ 0.05
GPC1-209ENST00000495100 RIMBP2O15034 1052 aa15.33■□□□□ 0.04
GPC1-209ENST00000495100 TEX33O43247 280 aa15.33■□□□□ 0.04
GPC1-209ENST00000495100 TNNT3P45378 269 aaPredicted RBP15.33■□□□□ 0.04
GPC1-209ENST00000495100 EIF5P55010 431 aaKnown RBP15.33■□□□□ 0.04
GPC1-209ENST00000495100 CCZ1BP86790 482 aa15.33■□□□□ 0.04
GPC1-209ENST00000495100 CCZ1P86791 482 aaPredicted RBP15.33■□□□□ 0.04
GPC1-209ENST00000495100 CCDC178Q5BJE1 867 aa15.33■□□□□ 0.04
GPC1-209ENST00000495100 LY9Q9HBG7 655 aa15.33■□□□□ 0.04
GPC1-209ENST00000495100 TFR2Q9UP52 801 aa15.33■□□□□ 0.04
GPC1-209ENST00000495100 PXDNLA1KZ92 1463 aa15.33■□□□□ 0.04
GPC1-209ENST00000495100 CCDC196A0A1B0GTZ2 297 aa15.33■□□□□ 0.04
GPC1-209ENST00000495100 SOWAHDA6NJG2 315 aa15.33■□□□□ 0.04
GPC1-209ENST00000495100 GSG1L2A8MUP6 293 aa15.33■□□□□ 0.04
GPC1-209ENST00000495100 ZPR1O75312 459 aa15.33■□□□□ 0.04
GPC1-209ENST00000495100 FMR1Q06787 632 aaKnown RBP eCLIP15.33■□□□□ 0.04
GPC1-209ENST00000495100 KMT5BQ4FZB7 885 aa15.33■□□□□ 0.04
GPC1-209ENST00000495100 METTL16Q86W50 562 aaKnown RBP15.33■□□□□ 0.04
GPC1-209ENST00000495100 MAPKAPK5Q8IW41 473 aa15.33■□□□□ 0.04
GPC1-209ENST00000495100 IGSF22Q8N9C0 903 aa15.33■□□□□ 0.04
GPC1-209ENST00000495100 WASF1Q92558 559 aa15.33■□□□□ 0.04
GPC1-209ENST00000495100 NOL10Q9BSC4 688 aaKnown RBP15.33■□□□□ 0.04
GPC1-209ENST00000495100 POLR3EQ9NVU0 708 aa15.33■□□□□ 0.04
GPC1-209ENST00000495100 PP2D1A8MPX8 630 aa15.32■□□□□ 0.04
GPC1-209ENST00000495100 GNPATO15228 680 aa15.32■□□□□ 0.04
GPC1-209ENST00000495100 FOXP2O15409 715 aa15.32■□□□□ 0.04
GPC1-209ENST00000495100 VEGFAP15692 232 aaPredicted RBP15.32■□□□□ 0.04
GPC1-209ENST00000495100 TERF1P54274 439 aa15.32■□□□□ 0.04
GPC1-209ENST00000495100 IKQ13123 557 aaPredicted RBP15.32■□□□□ 0.04
GPC1-209ENST00000495100 KCTD19Q17RG1 926 aaPredicted RBP15.32■□□□□ 0.04
GPC1-209ENST00000495100 RASGRP2Q7LDG7 609 aa15.32■□□□□ 0.04
GPC1-209ENST00000495100 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.32■□□□□ 0.04
GPC1-209ENST00000495100 FOXP4Q8IVH2 680 aaPredicted RBP15.32■□□□□ 0.04
GPC1-209ENST00000495100 CCDC150Q8NCX0 1101 aa15.32■□□□□ 0.04
GPC1-209ENST00000495100 CAGE1Q8TC20 777 aa15.32■□□□□ 0.04
GPC1-209ENST00000495100 SYMPKQ92797 1274 aaKnown RBP15.32■□□□□ 0.04
GPC1-209ENST00000495100 CELF1Q92879 486 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms