RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 GRIN1Q05586 938 aa12.11□□□□□ -0.47
SAMM50-206ENST00000494795 SEC23AQ15436 765 aa12.11□□□□□ -0.47
SAMM50-206ENST00000494795 TXNRD1Q16881 649 aa12.11□□□□□ -0.47
SAMM50-206ENST00000494795 CSPP1Q1MSJ5 1256 aa12.11□□□□□ -0.47
SAMM50-206ENST00000494795 SH3RF3Q8TEJ3 882 aaPredicted RBP12.11□□□□□ -0.47
SAMM50-206ENST00000494795 TMEM87BQ96K49 555 aa12.11□□□□□ -0.47
SAMM50-206ENST00000494795 CLSTN2Q9H4D0 955 aa12.11□□□□□ -0.47
SAMM50-206ENST00000494795 POLLQ9UGP5 575 aa12.11□□□□□ -0.47
SAMM50-206ENST00000494795 MROH7-TTC4A0A0A0MT08 1334 aa12.11□□□□□ -0.47
SAMM50-206ENST00000494795 IARSP41252 1262 aaKnown RBP12.1□□□□□ -0.47
SAMM50-206ENST00000494795 C11orf57Q6ZUT1 292 aaPredicted RBP12.1□□□□□ -0.47
SAMM50-206ENST00000494795 NBPF11Q86T75 865 aa12.1□□□□□ -0.47
SAMM50-206ENST00000494795 FSIP1Q8NA03 581 aa12.1□□□□□ -0.47
SAMM50-206ENST00000494795 CFAP45Q9UL16 551 aa12.1□□□□□ -0.47
SAMM50-206ENST00000494795 MTMR7Q9Y216 660 aa12.1□□□□□ -0.47
SAMM50-206ENST00000494795 EARS2Q5JPH6 523 aaKnown RBP12.1□□□□□ -0.47
SAMM50-206ENST00000494795 UBR3Q6ZT12 1888 aa12.1□□□□□ -0.47
SAMM50-206ENST00000494795 ZNF654Q8IZM8 581 aa12.1□□□□□ -0.47
SAMM50-206ENST00000494795 ENGASEQ8NFI3 743 aa12.1□□□□□ -0.47
SAMM50-206ENST00000494795 ANP32BQ92688 251 aaKnown RBP12.1□□□□□ -0.47
SAMM50-206ENST00000494795 WDR19Q8NEZ3 1342 aa12.09□□□□□ -0.47
SAMM50-206ENST00000494795 WNT7AO00755 349 aa12.09□□□□□ -0.47
SAMM50-206ENST00000494795 ATP2B1P20020 1258 aa12.09□□□□□ -0.47
SAMM50-206ENST00000494795 LIFRP42702 1097 aa12.09□□□□□ -0.47
SAMM50-206ENST00000494795 SF3A1Q15459 793 aaKnown RBP12.09□□□□□ -0.47
SAMM50-206ENST00000494795 ISM2Q6H9L7 571 aa12.09□□□□□ -0.47
SAMM50-206ENST00000494795 RIMBP2O15034 1052 aa12.09□□□□□ -0.47
SAMM50-206ENST00000494795 UFL1O94874 794 aa12.09□□□□□ -0.47
SAMM50-206ENST00000494795 GNAT2P19087 354 aa12.09□□□□□ -0.47
SAMM50-206ENST00000494795 SPC24Q8NBT2 197 aa12.09□□□□□ -0.47
SAMM50-206ENST00000494795 TTC12Q9H892 705 aaPredicted RBP12.09□□□□□ -0.47
SAMM50-206ENST00000494795 CBX8Q9HC52 389 aa12.09□□□□□ -0.47
SAMM50-206ENST00000494795 SAP30BPQ9UHR5 308 aaKnown RBP12.09□□□□□ -0.47
SAMM50-206ENST00000494795 POLRMTO00411 1230 aaKnown RBP12.09□□□□□ -0.47
SAMM50-206ENST00000494795 RPGRQ92834 1020 aaKnown RBP12.09□□□□□ -0.47
SAMM50-206ENST00000494795 KRT23Q9C075 422 aa12.09□□□□□ -0.47
SAMM50-206ENST00000494795 DHX16O60231 1041 aaKnown RBP12.08□□□□□ -0.48
SAMM50-206ENST00000494795 ANKRD2Q9GZV1 360 aa12.08□□□□□ -0.48
SAMM50-206ENST00000494795 MCM9Q9NXL9 1143 aa12.08□□□□□ -0.48
SAMM50-206ENST00000494795 RTEL1Q9NZ71 1219 aa12.08□□□□□ -0.48
SAMM50-206ENST00000494795 TIAM2Q8IVF5 1701 aa12.08□□□□□ -0.48
SAMM50-206ENST00000494795 PLCD1P51178 756 aa12.08□□□□□ -0.48
SAMM50-206ENST00000494795 STK38Q15208 465 aa12.08□□□□□ -0.48
SAMM50-206ENST00000494795 RTN1Q16799 776 aa12.08□□□□□ -0.48
SAMM50-206ENST00000494795 COL23A1Q86Y22 540 aaPredicted RBP12.08□□□□□ -0.48
SAMM50-206ENST00000494795 DZIP1Q86YF9 867 aaKnown RBP12.08□□□□□ -0.48
SAMM50-206ENST00000494795 FANCBQ8NB91 859 aa12.08□□□□□ -0.48
SAMM50-206ENST00000494795 UBAC1Q9BSL1 405 aa12.08□□□□□ -0.48
SAMM50-206ENST00000494795 TOB1P50616 345 aaPredicted RBP12.07□□□□□ -0.48
SAMM50-206ENST00000494795 AXDND1Q5T1B0 1012 aaPredicted RBP12.07□□□□□ -0.48
SAMM50-206ENST00000494795 ZSCAN10Q96SZ4 725 aaPredicted RBP12.07□□□□□ -0.48
SAMM50-206ENST00000494795 CNNM2Q9H8M5 875 aa12.07□□□□□ -0.48
SAMM50-206ENST00000494795 VPS54Q9P1Q0 977 aa12.07□□□□□ -0.48
SAMM50-206ENST00000494795 F8W031 263 aaPredicted RBP12.07□□□□□ -0.48
SAMM50-206ENST00000494795 BIN1O00499 593 aa12.07□□□□□ -0.48
SAMM50-206ENST00000494795 CCDC192P0DO97 292 aa12.07□□□□□ -0.48
SAMM50-206ENST00000494795 CLCN1P35523 988 aa12.07□□□□□ -0.48
SAMM50-206ENST00000494795 CRY2Q49AN0 593 aa12.07□□□□□ -0.48
SAMM50-206ENST00000494795 ANO1Q5XXA6 986 aa12.07□□□□□ -0.48
SAMM50-206ENST00000494795 MAPKAPK5Q8IW41 473 aa12.07□□□□□ -0.48
SAMM50-206ENST00000494795 CRACR2BQ8N4Y2 399 aaPredicted RBP12.07□□□□□ -0.48
SAMM50-206ENST00000494795 TDRD7Q8NHU6 1098 aaKnown RBP12.07□□□□□ -0.48
SAMM50-206ENST00000494795 TGFBRAP1Q8WUH2 860 aa12.07□□□□□ -0.48
SAMM50-206ENST00000494795 KCNQ5Q9NR82 932 aa12.07□□□□□ -0.48
SAMM50-206ENST00000494795 USP17L3A6NCW0 530 aa12.07□□□□□ -0.48
SAMM50-206ENST00000494795 USP17L4A6NCW7 530 aa12.07□□□□□ -0.48
SAMM50-206ENST00000494795 SPTLC2O15270 562 aa12.07□□□□□ -0.48
SAMM50-206ENST00000494795 FMNL1O95466 1100 aaPredicted RBP12.07□□□□□ -0.48
SAMM50-206ENST00000494795 SSRP1Q08945 709 aaKnown RBP12.07□□□□□ -0.48
SAMM50-206ENST00000494795 RBM43Q6ZSC3 357 aaKnown RBP12.07□□□□□ -0.48
SAMM50-206ENST00000494795 USP17L1Q7RTZ2 530 aa12.07□□□□□ -0.48
SAMM50-206ENST00000494795 FMR1NBQ8N0W7 255 aaPredicted RBP12.07□□□□□ -0.48
SAMM50-206ENST00000494795 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.07□□□□□ -0.48
SAMM50-206ENST00000494795 CPVLQ9H3G5 476 aa12.07□□□□□ -0.48
SAMM50-206ENST00000494795 DUOX1Q9NRD9 1551 aa12.06□□□□□ -0.48
SAMM50-206ENST00000494795 PKN1Q16512 942 aa12.06□□□□□ -0.48
SAMM50-206ENST00000494795 ZNF396Q96N95 335 aaPredicted RBP12.06□□□□□ -0.48
SAMM50-206ENST00000494795 MAP3K14Q99558 947 aa12.06□□□□□ -0.48
SAMM50-206ENST00000494795 CD209Q9NNX6 404 aa12.06□□□□□ -0.48
SAMM50-206ENST00000494795 ANAPC4Q9UJX5 808 aa12.06□□□□□ -0.48
SAMM50-206ENST00000494795 KIF3AQ9Y496 699 aa12.06□□□□□ -0.48
SAMM50-206ENST00000494795 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.06□□□□□ -0.48
SAMM50-206ENST00000494795 XDHP47989 1333 aa12.06□□□□□ -0.48
SAMM50-206ENST00000494795 PTPAQ15257 358 aa12.06□□□□□ -0.48
SAMM50-206ENST00000494795 ZSCAN30Q86W11 494 aa12.06□□□□□ -0.48
SAMM50-206ENST00000494795 ESR2Q92731 530 aa12.06□□□□□ -0.48
SAMM50-206ENST00000494795 BRIP1Q9BX63 1249 aa12.06□□□□□ -0.48
SAMM50-206ENST00000494795 IL17RBQ9NRM6 502 aa12.06□□□□□ -0.48
SAMM50-206ENST00000494795 DDX19AQ9NUU7 478 aaKnown RBP12.06□□□□□ -0.48
SAMM50-206ENST00000494795 ZNF219Q9P2Y4 722 aaPredicted RBP12.06□□□□□ -0.48
SAMM50-206ENST00000494795 NRBP1Q9UHY1 535 aa12.06□□□□□ -0.48
SAMM50-206ENST00000494795 V9GY48 417 aaPredicted RBP12.06□□□□□ -0.48
SAMM50-206ENST00000494795 FOXN1O15353 648 aa12.05□□□□□ -0.48
SAMM50-206ENST00000494795 LDHBP07195 334 aaKnown RBP12.05□□□□□ -0.48
SAMM50-206ENST00000494795 IFNAR1P17181 557 aa12.05□□□□□ -0.48
SAMM50-206ENST00000494795 FUT2Q10981 343 aa12.05□□□□□ -0.48
SAMM50-206ENST00000494795 TROAPQ12815 778 aa12.05□□□□□ -0.48
SAMM50-206ENST00000494795 SHC4Q6S5L8 630 aa12.05□□□□□ -0.48
SAMM50-206ENST00000494795 MKRN1Q9UHC7 482 aaKnown RBP12.05□□□□□ -0.48
SAMM50-206ENST00000494795 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 216.2 ms