RNA–Protein interactions for RNA: ENST00000494467.1

ABCA1-204, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 3

Gene ABCA1, Length 807 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-204ENST00000494467 NBPF9Q3BBW0 867 aa10.95□□□□□ -0.66
ABCA1-204ENST00000494467 DHX32Q7L7V1 743 aaKnown RBP10.95□□□□□ -0.66
ABCA1-204ENST00000494467 SH3BP5LQ7L8J4 393 aa10.95□□□□□ -0.66
ABCA1-204ENST00000494467 APOBEC3FQ8IUX4 373 aaKnown RBP10.95□□□□□ -0.66
ABCA1-204ENST00000494467 MAPKAPK5Q8IW41 473 aa10.95□□□□□ -0.66
ABCA1-204ENST00000494467 NCOA7Q8NI08 942 aa10.95□□□□□ -0.66
ABCA1-204ENST00000494467 SWAP70Q9UH65 585 aa10.95□□□□□ -0.66
ABCA1-204ENST00000494467 HERC5Q9UII4 1024 aaKnown RBP10.95□□□□□ -0.66
ABCA1-204ENST00000494467 TACC3Q9Y6A5 838 aa10.95□□□□□ -0.66
ABCA1-204ENST00000494467 ATAD5Q96QE3 1844 aa10.95□□□□□ -0.66
ABCA1-204ENST00000494467 RPS6KB1P23443 525 aa10.94□□□□□ -0.66
ABCA1-204ENST00000494467 PLCD1P51178 756 aa10.94□□□□□ -0.66
ABCA1-204ENST00000494467 PDE4BQ07343 736 aa10.94□□□□□ -0.66
ABCA1-204ENST00000494467 TATDN1Q6P1N9 297 aa10.94□□□□□ -0.66
ABCA1-204ENST00000494467 BLOC1S2Q6QNY1 142 aa10.94□□□□□ -0.66
ABCA1-204ENST00000494467 MFSD6Q6ZSS7 791 aa10.94□□□□□ -0.66
ABCA1-204ENST00000494467 SAMD7Q7Z3H4 446 aa10.94□□□□□ -0.66
ABCA1-204ENST00000494467 JAKMIP1Q96N16 626 aaKnown RBP10.94□□□□□ -0.66
ABCA1-204ENST00000494467 TEPSINQ96N21 525 aa10.94□□□□□ -0.66
ABCA1-204ENST00000494467 TCP11L1Q9NUJ3 509 aa10.94□□□□□ -0.66
ABCA1-204ENST00000494467 SERPINB13Q9UIV8 391 aa10.94□□□□□ -0.66
ABCA1-204ENST00000494467 HACL1Q9UJ83 578 aa10.94□□□□□ -0.66
ABCA1-204ENST00000494467 CYP46A1Q9Y6A2 500 aa10.94□□□□□ -0.66
ABCA1-204ENST00000494467 POLR3DP05423 398 aaPredicted RBP10.93□□□□□ -0.66
ABCA1-204ENST00000494467 HLA-DOAP06340 250 aa10.93□□□□□ -0.66
ABCA1-204ENST00000494467 MCM5P33992 734 aa10.93□□□□□ -0.66
ABCA1-204ENST00000494467 HAND2P61296 217 aa10.93□□□□□ -0.66
ABCA1-204ENST00000494467 CTDSPL2Q05D32 466 aa10.93□□□□□ -0.66
ABCA1-204ENST00000494467 TRDNQ13061 729 aa10.93□□□□□ -0.66
ABCA1-204ENST00000494467 PNMA8AQ86V59 439 aaPredicted RBP10.93□□□□□ -0.66
ABCA1-204ENST00000494467 ZFPM1Q8IX07 1006 aa10.93□□□□□ -0.66
ABCA1-204ENST00000494467 TRPM4Q8TD43 1214 aa10.93□□□□□ -0.66
ABCA1-204ENST00000494467 ANKS1AQ92625 1134 aa10.93□□□□□ -0.66
ABCA1-204ENST00000494467 TMEM87BQ96K49 555 aa10.93□□□□□ -0.66
ABCA1-204ENST00000494467 CCDC17Q96LX7 622 aa10.93□□□□□ -0.66
ABCA1-204ENST00000494467 TAF1DQ9H5J8 278 aaPredicted RBP10.93□□□□□ -0.66
ABCA1-204ENST00000494467 MYH4Q9Y623 1939 aa10.93□□□□□ -0.66
ABCA1-204ENST00000494467 NEDD4P46934 1319 aa10.92□□□□□ -0.66
ABCA1-204ENST00000494467 DDTLA6NHG4 134 aaPredicted RBP10.92□□□□□ -0.66
ABCA1-204ENST00000494467 MINDY4BA8MYZ0 360 aa10.92□□□□□ -0.66
ABCA1-204ENST00000494467 ST18O60284 1047 aa10.92□□□□□ -0.66
ABCA1-204ENST00000494467 CYP2D6P10635 497 aa10.92□□□□□ -0.66
ABCA1-204ENST00000494467 CASTP20810 708 aaKnown RBP10.92□□□□□ -0.66
ABCA1-204ENST00000494467 EPHX2P34913 555 aa10.92□□□□□ -0.66
ABCA1-204ENST00000494467 LIFRP42702 1097 aa10.92□□□□□ -0.66
ABCA1-204ENST00000494467 CDK8P49336 464 aa10.92□□□□□ -0.66
ABCA1-204ENST00000494467 NEK4P51957 841 aa10.92□□□□□ -0.66
ABCA1-204ENST00000494467 RCAN1P53805 252 aa10.92□□□□□ -0.66
ABCA1-204ENST00000494467 ANTXR2P58335 489 aa10.92□□□□□ -0.66
ABCA1-204ENST00000494467 ANKRD1Q15327 319 aa10.92□□□□□ -0.66
ABCA1-204ENST00000494467 TBC1D10BQ4KMP7 808 aaPredicted RBP10.92□□□□□ -0.66
ABCA1-204ENST00000494467 CCDC178Q5BJE1 867 aa10.92□□□□□ -0.66
ABCA1-204ENST00000494467 SGMS1Q86VZ5 419 aa10.92□□□□□ -0.66
ABCA1-204ENST00000494467 ESR2Q92731 530 aa10.92□□□□□ -0.66
ABCA1-204ENST00000494467 HOOK2Q96ED9 719 aa10.92□□□□□ -0.66
ABCA1-204ENST00000494467 GINM1Q9NU53 330 aa10.92□□□□□ -0.66
ABCA1-204ENST00000494467 ZSWIM5Q9P217 1185 aa10.92□□□□□ -0.66
ABCA1-204ENST00000494467 DOCK1Q14185 1865 aa10.91□□□□□ -0.66
ABCA1-204ENST00000494467 CYP2D7A0A087X1C5 515 aa10.91□□□□□ -0.66
ABCA1-204ENST00000494467 CLRN2A0PK11 232 aa10.91□□□□□ -0.66
ABCA1-204ENST00000494467 RASA1P20936 1047 aa10.91□□□□□ -0.66
ABCA1-204ENST00000494467 SHMT1P34896 483 aa10.91□□□□□ -0.66
ABCA1-204ENST00000494467 CACNB3P54284 484 aa10.91□□□□□ -0.66
ABCA1-204ENST00000494467 PICALMQ13492 652 aa10.91□□□□□ -0.66
ABCA1-204ENST00000494467 RASA3Q14644 834 aa10.91□□□□□ -0.66
ABCA1-204ENST00000494467 SEC23AQ15436 765 aa10.91□□□□□ -0.66
ABCA1-204ENST00000494467 RALYLQ86SE5 291 aaKnown RBP10.91□□□□□ -0.66
ABCA1-204ENST00000494467 TMTC2Q8N394 836 aa10.91□□□□□ -0.66
ABCA1-204ENST00000494467 NEDD1Q8NHV4 660 aa10.91□□□□□ -0.66
ABCA1-204ENST00000494467 IGDCC4Q8TDY8 1250 aa10.91□□□□□ -0.66
ABCA1-204ENST00000494467 DNAJC18Q9H819 358 aa10.91□□□□□ -0.66
ABCA1-204ENST00000494467 TRPM7Q96QT4 1865 aa10.91□□□□□ -0.66
ABCA1-204ENST00000494467 PHIPQ8WWQ0 1821 aa10.91□□□□□ -0.66
ABCA1-204ENST00000494467 NID2Q14112 1375 aa10.9□□□□□ -0.66
ABCA1-204ENST00000494467 IGKV6D-41A0A0C4DH26 115 aa10.9□□□□□ -0.66
ABCA1-204ENST00000494467 B4E1Z4 1266 aa10.9□□□□□ -0.66
ABCA1-204ENST00000494467 TCP10L2B9ZVM9 353 aa10.9□□□□□ -0.66
ABCA1-204ENST00000494467 SMIM22K7EJ46 135 aa10.9□□□□□ -0.66
ABCA1-204ENST00000494467 VEGFAP15692 232 aaPredicted RBP10.9□□□□□ -0.66
ABCA1-204ENST00000494467 COL9A3Q14050 684 aaPredicted RBP10.9□□□□□ -0.66
ABCA1-204ENST00000494467 TOB2Q14106 344 aaPredicted RBP10.9□□□□□ -0.66
ABCA1-204ENST00000494467 PPP4R3BQ5MIZ7 849 aa10.9□□□□□ -0.66
ABCA1-204ENST00000494467 ANGEL2Q5VTE6 544 aaKnown RBP10.9□□□□□ -0.66
ABCA1-204ENST00000494467 CYB5R4Q7L1T6 521 aa10.9□□□□□ -0.66
ABCA1-204ENST00000494467 DGKHQ86XP1 1220 aa10.9□□□□□ -0.66
ABCA1-204ENST00000494467 UPF3BQ9BZI7 483 aaKnown RBP10.9□□□□□ -0.66
ABCA1-204ENST00000494467 DEFB129Q9H1M3 183 aa10.9□□□□□ -0.66
ABCA1-204ENST00000494467 PDRG1Q9NUG6 133 aa10.9□□□□□ -0.66
ABCA1-204ENST00000494467 SAP30BPQ9UHR5 308 aaKnown RBP10.9□□□□□ -0.66
ABCA1-204ENST00000494467 ZNF112Q9UJU3 913 aa10.9□□□□□ -0.66
ABCA1-204ENST00000494467 SYNPO2Q9UMS6 1093 aa10.9□□□□□ -0.66
ABCA1-204ENST00000494467 SH2B2O14492 632 aaPredicted RBP10.89□□□□□ -0.67
ABCA1-204ENST00000494467 PRC1O43663 620 aa10.89□□□□□ -0.67
ABCA1-204ENST00000494467 KDM4AO75164 1064 aa10.89□□□□□ -0.67
ABCA1-204ENST00000494467 ANP32AP39687 249 aaKnown RBP10.89□□□□□ -0.67
ABCA1-204ENST00000494467 AK2P54819 239 aa10.89□□□□□ -0.67
ABCA1-204ENST00000494467 EVX2Q03828 476 aa10.89□□□□□ -0.67
ABCA1-204ENST00000494467 TCP10Q12799 353 aa10.89□□□□□ -0.67
ABCA1-204ENST00000494467 RBM26Q5T8P6 1007 aaKnown RBP10.89□□□□□ -0.67
ABCA1-204ENST00000494467 NKX2-3Q8TAU0 364 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms