RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 ERC2O15083 957 aa12.6□□□□□ -0.39
TRAPPC12-222ENST00000493792 MYCP01106 439 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC12-222ENST00000493792 IGHDP01880 384 aa12.6□□□□□ -0.39
TRAPPC12-222ENST00000493792 PDE6AP16499 860 aa12.6□□□□□ -0.39
TRAPPC12-222ENST00000493792 MAPKAPK5Q8IW41 473 aa12.6□□□□□ -0.39
TRAPPC12-222ENST00000493792 FAM43AQ8N2R8 423 aa12.6□□□□□ -0.39
TRAPPC12-222ENST00000493792 OTUD7AQ8TE49 926 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC12-222ENST00000493792 SH3TC2Q8TF17 1288 aa12.6□□□□□ -0.39
TRAPPC12-222ENST00000493792 TGFBRAP1Q8WUH2 860 aa12.6□□□□□ -0.39
TRAPPC12-222ENST00000493792 WRNIP1Q96S55 665 aa12.6□□□□□ -0.39
TRAPPC12-222ENST00000493792 ARHGAP39Q9C0H5 1083 aa12.6□□□□□ -0.39
TRAPPC12-222ENST00000493792 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.6□□□□□ -0.39
TRAPPC12-222ENST00000493792 ELP3Q9H9T3 547 aa12.6□□□□□ -0.39
TRAPPC12-222ENST00000493792 DDX4Q9NQI0 724 aaKnown RBP12.6□□□□□ -0.39
TRAPPC12-222ENST00000493792 CSADQ9Y600 493 aa12.6□□□□□ -0.39
TRAPPC12-222ENST00000493792 RBBP6Q7Z6E9 1792 aaKnown RBP12.59□□□□□ -0.39
TRAPPC12-222ENST00000493792 IGSF3O75054 1194 aa12.59□□□□□ -0.39
TRAPPC12-222ENST00000493792 MAP4K4O95819 1239 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC12-222ENST00000493792 MX1P20591 662 aa12.59□□□□□ -0.39
TRAPPC12-222ENST00000493792 USP5P45974 858 aa12.59□□□□□ -0.39
TRAPPC12-222ENST00000493792 MAP3K9P80192 1104 aa12.59□□□□□ -0.39
TRAPPC12-222ENST00000493792 ARHGEF6Q15052 776 aa12.59□□□□□ -0.39
TRAPPC12-222ENST00000493792 UBE2Q1Q7Z7E8 422 aa12.59□□□□□ -0.39
TRAPPC12-222ENST00000493792 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.59□□□□□ -0.39
TRAPPC12-222ENST00000493792 SHISA4Q96DD7 197 aa12.59□□□□□ -0.39
TRAPPC12-222ENST00000493792 ZNF341Q9BYN7 854 aa12.59□□□□□ -0.39
TRAPPC12-222ENST00000493792 LNPKQ9C0E8 428 aa12.59□□□□□ -0.39
TRAPPC12-222ENST00000493792 ZFYVE28Q9HCC9 887 aa12.59□□□□□ -0.39
TRAPPC12-222ENST00000493792 DOCK2Q92608 1830 aa12.59□□□□□ -0.39
TRAPPC12-222ENST00000493792 ZNF532Q9HCE3 1301 aa12.59□□□□□ -0.39
TRAPPC12-222ENST00000493792 MAGEB6P1A0A0J9YX57 407 aa12.58□□□□□ -0.4
TRAPPC12-222ENST00000493792 DDTLA6NHG4 134 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC12-222ENST00000493792 VGLL4Q14135 290 aa12.58□□□□□ -0.4
TRAPPC12-222ENST00000493792 MTFR1Q15390 333 aa12.58□□□□□ -0.4
TRAPPC12-222ENST00000493792 TAF1CQ15572 869 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC12-222ENST00000493792 ZSCAN25Q6NSZ9 544 aa12.58□□□□□ -0.4
TRAPPC12-222ENST00000493792 SH3BP5LQ7L8J4 393 aa12.58□□□□□ -0.4
TRAPPC12-222ENST00000493792 SLC17A8Q8NDX2 589 aa12.58□□□□□ -0.4
TRAPPC12-222ENST00000493792 ZKSCAN4Q969J2 545 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC12-222ENST00000493792 TRIM34Q9BYJ4 488 aa12.58□□□□□ -0.4
TRAPPC12-222ENST00000493792 OSBPL5Q9H0X9 879 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC12-222ENST00000493792 SAP30BPQ9UHR5 308 aaKnown RBP12.58□□□□□ -0.4
TRAPPC12-222ENST00000493792 TTC41PQ6P2S7 1318 aa12.58□□□□□ -0.4
TRAPPC12-222ENST00000493792 RFX7Q2KHR2 1363 aa12.57□□□□□ -0.4
TRAPPC12-222ENST00000493792 CCL15-CCL14A0A0B4J2E2 113 aa12.57□□□□□ -0.4
TRAPPC12-222ENST00000493792 TLR2O60603 784 aa12.57□□□□□ -0.4
TRAPPC12-222ENST00000493792 GLRX3O76003 335 aaKnown RBP12.57□□□□□ -0.4
TRAPPC12-222ENST00000493792 PPP4CP60510 307 aa12.57□□□□□ -0.4
TRAPPC12-222ENST00000493792 CCL15Q16663 113 aa12.57□□□□□ -0.4
TRAPPC12-222ENST00000493792 CERS3Q8IU89 383 aa12.57□□□□□ -0.4
TRAPPC12-222ENST00000493792 LAMA3Q16787 3333 aa12.57□□□□□ -0.4
TRAPPC12-222ENST00000493792 OTOFQ9HC10 1997 aa12.57□□□□□ -0.4
TRAPPC12-222ENST00000493792 FAM196BA6NMK8 535 aa12.56□□□□□ -0.4
TRAPPC12-222ENST00000493792 CTGFP29279 349 aa12.56□□□□□ -0.4
TRAPPC12-222ENST00000493792 INPP5BP32019 993 aa12.56□□□□□ -0.4
TRAPPC12-222ENST00000493792 ADD2P35612 726 aa12.56□□□□□ -0.4
TRAPPC12-222ENST00000493792 GTF2A2P52657 109 aa12.56□□□□□ -0.4
TRAPPC12-222ENST00000493792 LACTBP83111 547 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC12-222ENST00000493792 SLFNL1Q499Z3 407 aa12.56□□□□□ -0.4
TRAPPC12-222ENST00000493792 TMED8Q6PL24 325 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC12-222ENST00000493792 SMC5Q8IY18 1101 aa12.56□□□□□ -0.4
TRAPPC12-222ENST00000493792 DPF3Q92784 378 aa12.56□□□□□ -0.4
TRAPPC12-222ENST00000493792 CRNKL1Q9BZJ0 848 aaKnown RBP12.56□□□□□ -0.4
TRAPPC12-222ENST00000493792 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.56□□□□□ -0.4
TRAPPC12-222ENST00000493792 FLT1P17948 1338 aa12.56□□□□□ -0.4
TRAPPC12-222ENST00000493792 SPDYE5A6NIY4 337 aa12.55□□□□□ -0.4
TRAPPC12-222ENST00000493792 NPM3O75607 178 aaKnown RBP12.55□□□□□ -0.4
TRAPPC12-222ENST00000493792 HLA-DOAP06340 250 aa12.55□□□□□ -0.4
TRAPPC12-222ENST00000493792 SLURP2P0DP57 97 aa12.55□□□□□ -0.4
TRAPPC12-222ENST00000493792 CHD1LQ86WJ1 897 aa12.55□□□□□ -0.4
TRAPPC12-222ENST00000493792 ERO1BQ86YB8 467 aa12.55□□□□□ -0.4
TRAPPC12-222ENST00000493792 CRACR2BQ8N4Y2 399 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC12-222ENST00000493792 KBTBD3Q8NAB2 608 aa12.55□□□□□ -0.4
TRAPPC12-222ENST00000493792 FSD1Q9BTV5 496 aa12.55□□□□□ -0.4
TRAPPC12-222ENST00000493792 ARMT1Q9H993 441 aa12.55□□□□□ -0.4
TRAPPC12-222ENST00000493792 PALD1Q9ULE6 856 aa12.55□□□□□ -0.4
TRAPPC12-222ENST00000493792 SNCAIPQ9Y6H5 919 aa12.55□□□□□ -0.4
TRAPPC12-222ENST00000493792 LAMB1P07942 1786 aa12.54□□□□□ -0.4
TRAPPC12-222ENST00000493792 TCRBV5S4A2TA0A5A2 114 aa12.54□□□□□ -0.4
TRAPPC12-222ENST00000493792 BTBD19C9JJ37 291 aa12.54□□□□□ -0.4
TRAPPC12-222ENST00000493792 MBD4O95243 580 aa12.54□□□□□ -0.4
TRAPPC12-222ENST00000493792 GNRH1P01148 92 aa12.54□□□□□ -0.4
TRAPPC12-222ENST00000493792 CHGBP05060 677 aa12.54□□□□□ -0.4
TRAPPC12-222ENST00000493792 PDE1AP54750 535 aa12.54□□□□□ -0.4
TRAPPC12-222ENST00000493792 PRMT2P55345 433 aa12.54□□□□□ -0.4
TRAPPC12-222ENST00000493792 LRRFIP1Q32MZ4 808 aaKnown RBP12.54□□□□□ -0.4
TRAPPC12-222ENST00000493792 C17orf99Q6UX52 265 aa12.54□□□□□ -0.4
TRAPPC12-222ENST00000493792 LCORLQ8N3X6 602 aa12.54□□□□□ -0.4
TRAPPC12-222ENST00000493792 PI4K2BQ8TCG2 481 aa12.54□□□□□ -0.4
TRAPPC12-222ENST00000493792 DHX36Q9H2U1 1008 aaKnown RBP12.54□□□□□ -0.4
TRAPPC12-222ENST00000493792 PICK1Q9NRD5 415 aa12.54□□□□□ -0.4
TRAPPC12-222ENST00000493792 PI4KBQ9UBF8 816 aa12.54□□□□□ -0.4
TRAPPC12-222ENST00000493792 MYH7P12883 1935 aa12.54□□□□□ -0.4
TRAPPC12-222ENST00000493792 ATRNL1Q5VV63 1379 aa12.54□□□□□ -0.4
TRAPPC12-222ENST00000493792 CDK5RAP2Q96SN8 1893 aa12.53□□□□□ -0.4
TRAPPC12-222ENST00000493792 SOX1O00570 391 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC12-222ENST00000493792 RNF113AO15541 343 aaKnown RBP12.53□□□□□ -0.4
TRAPPC12-222ENST00000493792 POLR3DP05423 398 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC12-222ENST00000493792 NEFLP07196 543 aa12.53□□□□□ -0.4
TRAPPC12-222ENST00000493792 CETPP11597 493 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms