RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 EVX2Q03828 476 aa16.59■□□□□ 0.25
PDZRN3-210ENST00000492909 CYB5R4Q7L1T6 521 aa16.59■□□□□ 0.25
PDZRN3-210ENST00000492909 PRMT6Q96LA8 375 aaPredicted RBP16.59■□□□□ 0.25
PDZRN3-210ENST00000492909 IDI2Q9BXS1 227 aa16.59■□□□□ 0.25
PDZRN3-210ENST00000492909 TDRD3Q9H7E2 651 aaKnown RBP16.59■□□□□ 0.25
PDZRN3-210ENST00000492909 ZSWIM5Q9P217 1185 aa16.59■□□□□ 0.25
PDZRN3-210ENST00000492909 TPCN1Q9ULQ1 816 aa16.59■□□□□ 0.25
PDZRN3-210ENST00000492909 ORC4O43929 436 aa16.59■□□□□ 0.25
PDZRN3-210ENST00000492909 NPM3O75607 178 aaKnown RBP16.59■□□□□ 0.25
PDZRN3-210ENST00000492909 CUL4AQ13619 759 aa16.59■□□□□ 0.25
PDZRN3-210ENST00000492909 DPY19L2Q6NUT2 758 aa16.59■□□□□ 0.25
PDZRN3-210ENST00000492909 MTMR14Q8NCE2 650 aa16.59■□□□□ 0.25
PDZRN3-210ENST00000492909 DPF2Q92785 391 aa16.59■□□□□ 0.25
PDZRN3-210ENST00000492909 OSBPL5Q9H0X9 879 aaPredicted RBP16.59■□□□□ 0.25
PDZRN3-210ENST00000492909 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.59■□□□□ 0.25
PDZRN3-210ENST00000492909 PLCD1P51178 756 aa16.58■□□□□ 0.24
PDZRN3-210ENST00000492909 NFIAQ12857 509 aa16.58■□□□□ 0.24
PDZRN3-210ENST00000492909 TTC6Q86TZ1 520 aa16.58■□□□□ 0.24
PDZRN3-210ENST00000492909 NKX2-3Q8TAU0 364 aa16.58■□□□□ 0.24
PDZRN3-210ENST00000492909 TMEM87BQ96K49 555 aa16.58■□□□□ 0.24
PDZRN3-210ENST00000492909 TMOD2Q9NZR1 351 aa16.58■□□□□ 0.24
PDZRN3-210ENST00000492909 PRDM1O75626 825 aa16.57■□□□□ 0.24
PDZRN3-210ENST00000492909 NT5C2P49902 561 aa16.57■□□□□ 0.24
PDZRN3-210ENST00000492909 GMPSP49915 693 aaPredicted RBP16.57■□□□□ 0.24
PDZRN3-210ENST00000492909 CACNB3P54284 484 aa16.57■□□□□ 0.24
PDZRN3-210ENST00000492909 ME3Q16798 604 aa16.57■□□□□ 0.24
PDZRN3-210ENST00000492909 GPC2Q8N158 579 aa16.57■□□□□ 0.24
PDZRN3-210ENST00000492909 ZNF784Q8NCA9 323 aaPredicted RBP16.57■□□□□ 0.24
PDZRN3-210ENST00000492909 ZNF287Q9HBT7 754 aa16.57■□□□□ 0.24
PDZRN3-210ENST00000492909 NMRK2Q9NPI5 230 aa16.57■□□□□ 0.24
PDZRN3-210ENST00000492909 FOXD4L1Q9NU39 408 aa16.57■□□□□ 0.24
PDZRN3-210ENST00000492909 MYH8P13535 1937 aa16.57■□□□□ 0.24
PDZRN3-210ENST00000492909 RANBP6O60518 1105 aaKnown RBP16.56■□□□□ 0.24
PDZRN3-210ENST00000492909 LARGE1O95461 756 aa16.56■□□□□ 0.24
PDZRN3-210ENST00000492909 ZNF280AP59817 542 aaPredicted RBP16.56■□□□□ 0.24
PDZRN3-210ENST00000492909 SART3Q15020 963 aaKnown RBP16.56■□□□□ 0.24
PDZRN3-210ENST00000492909 DYNLL2Q96FJ2 89 aa16.56■□□□□ 0.24
PDZRN3-210ENST00000492909 INTS4Q96HW7 963 aaKnown RBP16.56■□□□□ 0.24
PDZRN3-210ENST00000492909 MTA3Q9BTC8 594 aa16.56■□□□□ 0.24
PDZRN3-210ENST00000492909 MYOZ2Q9NPC6 264 aa16.56■□□□□ 0.24
PDZRN3-210ENST00000492909 ANGEL1Q9UNK9 670 aaKnown RBP16.56■□□□□ 0.24
PDZRN3-210ENST00000492909 SHTN1A0MZ66 631 aa16.56■□□□□ 0.24
PDZRN3-210ENST00000492909 MYO1BO43795 1136 aa16.56■□□□□ 0.24
PDZRN3-210ENST00000492909 APOBRQ0VD83 1088 aa16.56■□□□□ 0.24
PDZRN3-210ENST00000492909 C16orf86Q6ZW13 317 aa16.56■□□□□ 0.24
PDZRN3-210ENST00000492909 DHX36Q9H2U1 1008 aaKnown RBP16.56■□□□□ 0.24
PDZRN3-210ENST00000492909 RRAGCQ9HB90 399 aa16.56■□□□□ 0.24
PDZRN3-210ENST00000492909 MKNK2Q9HBH9 465 aa16.56■□□□□ 0.24
PDZRN3-210ENST00000492909 FAM198AQ9UFP1 575 aa16.56■□□□□ 0.24
PDZRN3-210ENST00000492909 POTECB2RU33 542 aa16.55■□□□□ 0.24
PDZRN3-210ENST00000492909 SH2B2O14492 632 aaPredicted RBP16.55■□□□□ 0.24
PDZRN3-210ENST00000492909 IFIT3O14879 490 aaKnown RBP16.55■□□□□ 0.24
PDZRN3-210ENST00000492909 ENTPD3O75355 529 aa16.55■□□□□ 0.24
PDZRN3-210ENST00000492909 HLA-DOAP06340 250 aa16.55■□□□□ 0.24
PDZRN3-210ENST00000492909 EVCP57679 992 aa16.55■□□□□ 0.24
PDZRN3-210ENST00000492909 TCP10Q12799 353 aa16.55■□□□□ 0.24
PDZRN3-210ENST00000492909 TMEM67Q5HYA8 995 aa16.55■□□□□ 0.24
PDZRN3-210ENST00000492909 MICALL2Q8IY33 904 aa16.55■□□□□ 0.24
PDZRN3-210ENST00000492909 IGDCC4Q8TDY8 1250 aa16.55■□□□□ 0.24
PDZRN3-210ENST00000492909 ZBED3Q96IU2 234 aaPredicted RBP16.55■□□□□ 0.24
PDZRN3-210ENST00000492909 UBAC1Q9BSL1 405 aa16.55■□□□□ 0.24
PDZRN3-210ENST00000492909 GPHNQ9NQX3 736 aaPredicted RBP16.55■□□□□ 0.24
PDZRN3-210ENST00000492909 ZNF70Q9UC06 446 aaPredicted RBP16.55■□□□□ 0.24
PDZRN3-210ENST00000492909 ERICH2A1L162 156 aa16.54■□□□□ 0.24
PDZRN3-210ENST00000492909 SPDYE2Q495Y8 402 aa16.54■□□□□ 0.24
PDZRN3-210ENST00000492909 IQCA1Q86XH1 822 aa16.54■□□□□ 0.24
PDZRN3-210ENST00000492909 GPBP1L1Q9HC44 474 aaPredicted RBP16.54■□□□□ 0.24
PDZRN3-210ENST00000492909 CNOT7Q9UIV1 285 aaKnown RBP16.54■□□□□ 0.24
PDZRN3-210ENST00000492909 CLRN2A0PK11 232 aa16.54■□□□□ 0.24
PDZRN3-210ENST00000492909 WNT10BO00744 389 aa16.54■□□□□ 0.24
PDZRN3-210ENST00000492909 LIFRP42702 1097 aa16.54■□□□□ 0.24
PDZRN3-210ENST00000492909 CDK8P49336 464 aa16.54■□□□□ 0.24
PDZRN3-210ENST00000492909 CCDC83Q8IWF9 413 aa16.54■□□□□ 0.24
PDZRN3-210ENST00000492909 ZFPM1Q8IX07 1006 aa16.54■□□□□ 0.24
PDZRN3-210ENST00000492909 SLC44A5Q8NCS7 719 aa16.54■□□□□ 0.24
PDZRN3-210ENST00000492909 ZNF274Q96GC6 653 aaPredicted RBP16.54■□□□□ 0.24
PDZRN3-210ENST00000492909 ZKSCAN3Q9BRR0 538 aa16.54■□□□□ 0.24
PDZRN3-210ENST00000492909 CWC22Q9HCG8 908 aaKnown RBP16.54■□□□□ 0.24
PDZRN3-210ENST00000492909 CHMP5Q9NZZ3 219 aa16.54■□□□□ 0.24
PDZRN3-210ENST00000492909 SERPINB13Q9UIV8 391 aa16.54■□□□□ 0.24
PDZRN3-210ENST00000492909 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.54■□□□□ 0.24
PDZRN3-210ENST00000492909 COL2A1P02458 1487 aaPredicted RBP16.53■□□□□ 0.24
PDZRN3-210ENST00000492909 TSPY2A6NKD2 308 aa16.53■□□□□ 0.24
PDZRN3-210ENST00000492909 EPS15P42566 896 aa16.53■□□□□ 0.24
PDZRN3-210ENST00000492909 STK3Q13188 491 aa16.53■□□□□ 0.24
PDZRN3-210ENST00000492909 FKBP1CQ5VVH2 108 aa16.53■□□□□ 0.24
PDZRN3-210ENST00000492909 SGMS1Q86VZ5 419 aa16.53■□□□□ 0.24
PDZRN3-210ENST00000492909 ZSCAN29Q8IWY8 852 aaPredicted RBP16.53■□□□□ 0.24
PDZRN3-210ENST00000492909 ZNF444Q8N0Y2 327 aaPredicted RBP16.53■□□□□ 0.24
PDZRN3-210ENST00000492909 TMTC2Q8N394 836 aa16.53■□□□□ 0.24
PDZRN3-210ENST00000492909 NECAB1Q8N987 351 aa16.53■□□□□ 0.24
PDZRN3-210ENST00000492909 L3MBTL3Q96JM7 780 aaPredicted RBP16.53■□□□□ 0.24
PDZRN3-210ENST00000492909 EHD4Q9H223 541 aa16.53■□□□□ 0.24
PDZRN3-210ENST00000492909 LY9Q9HBG7 655 aa16.53■□□□□ 0.24
PDZRN3-210ENST00000492909 NAP1L2Q9ULW6 460 aaPredicted RBP16.53■□□□□ 0.24
PDZRN3-210ENST00000492909 SIPA1L1O43166 1804 aa16.53■□□□□ 0.24
PDZRN3-210ENST00000492909 ATRNL1Q5VV63 1379 aa16.53■□□□□ 0.24
PDZRN3-210ENST00000492909 KLF18A0A0U1RQI7 1052 aa16.52■□□□□ 0.24
PDZRN3-210ENST00000492909 PDIA3P30101 505 aaKnown RBP16.52■□□□□ 0.24
PDZRN3-210ENST00000492909 GABPAQ06546 454 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms