RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 ELP3Q9H9T3 547 aa17.3■□□□□ 0.36
HLA-F-229ENST00000489502 AOC2O75106 756 aa17.29■□□□□ 0.36
HLA-F-229ENST00000489502 POLR3DP05423 398 aaPredicted RBP17.29■□□□□ 0.36
HLA-F-229ENST00000489502 SLC10A3P09131 477 aa17.29■□□□□ 0.36
HLA-F-229ENST00000489502 ANKRD13AQ8IZ07 590 aa17.29■□□□□ 0.36
HLA-F-229ENST00000489502 CRACR2BQ8N4Y2 399 aaPredicted RBP17.29■□□□□ 0.36
HLA-F-229ENST00000489502 ZKSCAN4Q969J2 545 aaPredicted RBP17.29■□□□□ 0.36
HLA-F-229ENST00000489502 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.29■□□□□ 0.36
HLA-F-229ENST00000489502 ATP8A2Q9NTI2 1148 aa17.29■□□□□ 0.36
HLA-F-229ENST00000489502 PI4KBQ9UBF8 816 aa17.29■□□□□ 0.36
HLA-F-229ENST00000489502 MYH8P13535 1937 aa17.29■□□□□ 0.36
HLA-F-229ENST00000489502 WDR33Q9C0J8 1336 aaKnown RBP17.28■□□□□ 0.36
HLA-F-229ENST00000489502 GSG1L2A8MUP6 293 aa17.28■□□□□ 0.36
HLA-F-229ENST00000489502 FAM155AB1AL88 458 aaPredicted RBP17.28■□□□□ 0.36
HLA-F-229ENST00000489502 SMIM22K7EJ46 135 aa17.28■□□□□ 0.36
HLA-F-229ENST00000489502 FOXP2O15409 715 aa17.28■□□□□ 0.36
HLA-F-229ENST00000489502 PLCD1P51178 756 aa17.28■□□□□ 0.36
HLA-F-229ENST00000489502 MAP3K9P80192 1104 aa17.28■□□□□ 0.36
HLA-F-229ENST00000489502 CWC27Q6UX04 472 aaKnown RBP17.28■□□□□ 0.36
HLA-F-229ENST00000489502 CNKSR2Q8WXI2 1034 aa17.28■□□□□ 0.36
HLA-F-229ENST00000489502 HELLSQ9NRZ9 838 aa17.28■□□□□ 0.36
HLA-F-229ENST00000489502 CSADQ9Y600 493 aa17.28■□□□□ 0.36
HLA-F-229ENST00000489502 SNCAIPQ9Y6H5 919 aa17.28■□□□□ 0.36
HLA-F-229ENST00000489502 CCDC171Q6TFL3 1326 aa17.27■□□□□ 0.36
HLA-F-229ENST00000489502 PHF20L1A8MW92 1017 aa17.27■□□□□ 0.36
HLA-F-229ENST00000489502 APPP05067 770 aa17.27■□□□□ 0.36
HLA-F-229ENST00000489502 ECE1P42892 770 aa17.27■□□□□ 0.36
HLA-F-229ENST00000489502 TDO2P48775 406 aa17.27■□□□□ 0.36
HLA-F-229ENST00000489502 RRP1BQ14684 758 aaKnown RBP17.27■□□□□ 0.36
HLA-F-229ENST00000489502 VPS53Q5VIR6 699 aa17.27■□□□□ 0.36
HLA-F-229ENST00000489502 DDRGK1Q96HY6 314 aa17.27■□□□□ 0.36
HLA-F-229ENST00000489502 ZIC5Q96T25 663 aa17.27■□□□□ 0.36
HLA-F-229ENST00000489502 TRIM34Q9BYJ4 488 aa17.27■□□□□ 0.36
HLA-F-229ENST00000489502 IL25Q9H293 177 aa17.27■□□□□ 0.36
HLA-F-229ENST00000489502 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.27■□□□□ 0.36
HLA-F-229ENST00000489502 HERC5Q9UII4 1024 aaKnown RBP17.27■□□□□ 0.36
HLA-F-229ENST00000489502 ZNF112Q9UJU3 913 aa17.27■□□□□ 0.36
HLA-F-229ENST00000489502 USP17L12C9JPN9 530 aa17.26■□□□□ 0.35
HLA-F-229ENST00000489502 USP17L21D6R901 530 aa17.26■□□□□ 0.35
HLA-F-229ENST00000489502 HIP1O00291 1037 aa17.26■□□□□ 0.35
HLA-F-229ENST00000489502 TBC1D12O60347 775 aa17.26■□□□□ 0.35
HLA-F-229ENST00000489502 GNAT2P19087 354 aa17.26■□□□□ 0.35
HLA-F-229ENST00000489502 GJA5P36382 358 aa17.26■□□□□ 0.35
HLA-F-229ENST00000489502 MAP3K10Q02779 954 aa17.26■□□□□ 0.35
HLA-F-229ENST00000489502 SHROOM1Q2M3G4 852 aaPredicted RBP17.26■□□□□ 0.35
HLA-F-229ENST00000489502 MCMDC2Q4G0Z9 681 aa17.26■□□□□ 0.35
HLA-F-229ENST00000489502 BMP2KLQ5H9B9 411 aa17.26■□□□□ 0.35
HLA-F-229ENST00000489502 TTC6Q86TZ1 520 aa17.26■□□□□ 0.35
HLA-F-229ENST00000489502 TICAM2Q86XR7 235 aa17.26■□□□□ 0.35
HLA-F-229ENST00000489502 SLC44A5Q8NCS7 719 aa17.26■□□□□ 0.35
HLA-F-229ENST00000489502 SLC10A4Q96EP9 437 aa17.26■□□□□ 0.35
HLA-F-229ENST00000489502 DYNLL2Q96FJ2 89 aa17.26■□□□□ 0.35
HLA-F-229ENST00000489502 WNK4Q96J92 1243 aa17.26■□□□□ 0.35
HLA-F-229ENST00000489502 EHD4Q9H223 541 aa17.26■□□□□ 0.35
HLA-F-229ENST00000489502 SERPINB13Q9UIV8 391 aa17.26■□□□□ 0.35
HLA-F-229ENST00000489502 PCNTO95613 3336 aa17.26■□□□□ 0.35
HLA-F-229ENST00000489502 CTR9Q6PD62 1173 aa17.25■□□□□ 0.35
HLA-F-229ENST00000489502 CCDC84Q86UT8 332 aaPredicted RBP17.25■□□□□ 0.35
HLA-F-229ENST00000489502 CCDC102AQ96A19 550 aa17.25■□□□□ 0.35
HLA-F-229ENST00000489502 OTUD5Q96G74 571 aa17.25■□□□□ 0.35
HLA-F-229ENST00000489502 ARPP21Q9UBL0 812 aaPredicted RBP17.25■□□□□ 0.35
HLA-F-229ENST00000489502 PHIPQ8WWQ0 1821 aa17.24■□□□□ 0.35
HLA-F-229ENST00000489502 GDF11O95390 407 aa17.24■□□□□ 0.35
HLA-F-229ENST00000489502 CHMLP26374 656 aa17.24■□□□□ 0.35
HLA-F-229ENST00000489502 NOL9Q5SY16 702 aaKnown RBP17.24■□□□□ 0.35
HLA-F-229ENST00000489502 C12orf60Q5U649 245 aa17.24■□□□□ 0.35
HLA-F-229ENST00000489502 SPRYD7Q5W111 196 aa17.24■□□□□ 0.35
HLA-F-229ENST00000489502 METTL16Q86W50 562 aaKnown RBP17.24■□□□□ 0.35
HLA-F-229ENST00000489502 AMOTL1Q8IY63 956 aa17.24■□□□□ 0.35
HLA-F-229ENST00000489502 SCYL3Q8IZE3 742 aa17.24■□□□□ 0.35
HLA-F-229ENST00000489502 IFNL3Q8IZI9 196 aa17.24■□□□□ 0.35
HLA-F-229ENST00000489502 OPTNQ96CV9 577 aa17.24■□□□□ 0.35
HLA-F-229ENST00000489502 LAMA4Q16363 1823 aa17.24■□□□□ 0.35
HLA-F-229ENST00000489502 SPDYE5A6NIY4 337 aa17.23■□□□□ 0.35
HLA-F-229ENST00000489502 PATL2C9JE40 543 aaKnown RBP17.23■□□□□ 0.35
HLA-F-229ENST00000489502 SHMT1P34896 483 aa17.23■□□□□ 0.35
HLA-F-229ENST00000489502 GABPAQ06546 454 aa17.23■□□□□ 0.35
HLA-F-229ENST00000489502 NOGQ13253 232 aa17.23■□□□□ 0.35
HLA-F-229ENST00000489502 GIMAP6Q6P9H5 292 aa17.23■□□□□ 0.35
HLA-F-229ENST00000489502 FOXP4Q8IVH2 680 aaPredicted RBP17.23■□□□□ 0.35
HLA-F-229ENST00000489502 STK11IPQ8N1F8 1099 aa17.23■□□□□ 0.35
HLA-F-229ENST00000489502 NACAP1Q9BZK3 213 aa17.23■□□□□ 0.35
HLA-F-229ENST00000489502 NAPBQ9H115 298 aa17.23■□□□□ 0.35
HLA-F-229ENST00000489502 ROBO3Q96MS0 1386 aa17.23■□□□□ 0.35
HLA-F-229ENST00000489502 UNCXA6NJT0 531 aa17.22■□□□□ 0.35
HLA-F-229ENST00000489502 MINDY4BA8MYZ0 360 aa17.22■□□□□ 0.35
HLA-F-229ENST00000489502 JAG1P78504 1218 aa17.22■□□□□ 0.35
HLA-F-229ENST00000489502 KIF23Q02241 960 aaPredicted RBP17.22■□□□□ 0.35
HLA-F-229ENST00000489502 ERO1BQ86YB8 467 aa17.22■□□□□ 0.35
HLA-F-229ENST00000489502 PICK1Q9NRD5 415 aa17.22■□□□□ 0.35
HLA-F-229ENST00000489502 RAD50Q92878 1312 aa17.21■□□□□ 0.35
HLA-F-229ENST00000489502 PTPRFP10586 1907 aa17.21■□□□□ 0.35
HLA-F-229ENST00000489502 CTNND1O60716 968 aaKnown RBP17.21■□□□□ 0.35
HLA-F-229ENST00000489502 HSPD1P10809 573 aaKnown RBP17.21■□□□□ 0.35
HLA-F-229ENST00000489502 CAP2P40123 477 aa17.21■□□□□ 0.35
HLA-F-229ENST00000489502 SBK1Q52WX2 424 aa17.21■□□□□ 0.35
HLA-F-229ENST00000489502 ZBTB21Q9ULJ3 1066 aa17.21■□□□□ 0.35
HLA-F-229ENST00000489502 ZBTB48P10074 688 aaPredicted RBP17.2■□□□□ 0.34
HLA-F-229ENST00000489502 MFAP1P55081 439 aaKnown RBP17.2■□□□□ 0.34
HLA-F-229ENST00000489502 TATDN1Q6P1N9 297 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 222 ms