RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 SLC5A1P13866 664 aa9.96□□□□□ -0.82
VTI1A-207ENST00000489357 FGFR2P21802 821 aa9.96□□□□□ -0.82
VTI1A-207ENST00000489357 DNAJB2P25686 324 aa9.96□□□□□ -0.82
VTI1A-207ENST00000489357 EXOSC10Q01780 885 aaKnown RBP9.96□□□□□ -0.82
VTI1A-207ENST00000489357 AMHR2Q16671 573 aa9.96□□□□□ -0.82
VTI1A-207ENST00000489357 SOGA3Q5TF21 947 aa9.96□□□□□ -0.82
VTI1A-207ENST00000489357 LRSAM1Q6UWE0 723 aa9.96□□□□□ -0.82
VTI1A-207ENST00000489357 GPT2Q8TD30 523 aa9.96□□□□□ -0.82
VTI1A-207ENST00000489357 CELF1Q92879 486 aaKnown RBP9.96□□□□□ -0.82
VTI1A-207ENST00000489357 CDC5LQ99459 802 aaKnown RBP9.96□□□□□ -0.82
VTI1A-207ENST00000489357 SCAND2PQ9GZW5 306 aaPredicted RBP9.96□□□□□ -0.82
VTI1A-207ENST00000489357 ZSCAN16Q9H4T2 348 aaPredicted RBP9.96□□□□□ -0.82
VTI1A-207ENST00000489357 ATP6V0A2Q9Y487 856 aa9.96□□□□□ -0.82
VTI1A-207ENST00000489357 PFKFB2O60825 505 aa9.95□□□□□ -0.82
VTI1A-207ENST00000489357 LARGE1O95461 756 aa9.95□□□□□ -0.82
VTI1A-207ENST00000489357 NASPP49321 788 aaPredicted RBP9.95□□□□□ -0.82
VTI1A-207ENST00000489357 RPS8P62241 208 aaKnown RBP9.95□□□□□ -0.82
VTI1A-207ENST00000489357 KRT85P78386 507 aa9.95□□□□□ -0.82
VTI1A-207ENST00000489357 FKBP4Q02790 459 aaKnown RBP eCLIP9.95□□□□□ -0.82
VTI1A-207ENST00000489357 PDE4DQ08499 809 aa9.95□□□□□ -0.82
VTI1A-207ENST00000489357 HS1BP3Q53T59 392 aa9.95□□□□□ -0.82
VTI1A-207ENST00000489357 LARP1BQ659C4 914 aaKnown RBP9.95□□□□□ -0.82
VTI1A-207ENST00000489357 OLFM4Q6UX06 510 aa9.95□□□□□ -0.82
VTI1A-207ENST00000489357 TMC4Q7Z404 712 aa9.95□□□□□ -0.82
VTI1A-207ENST00000489357 SLC51AQ86UW1 340 aa9.95□□□□□ -0.82
VTI1A-207ENST00000489357 SMARCC2Q8TAQ2 1214 aa9.95□□□□□ -0.82
VTI1A-207ENST00000489357 PPP1R9BQ96SB3 815 aa9.95□□□□□ -0.82
VTI1A-207ENST00000489357 PSMD1Q99460 953 aa9.95□□□□□ -0.82
VTI1A-207ENST00000489357 RTFDC1Q9BY42 306 aaPredicted RBP9.95□□□□□ -0.82
VTI1A-207ENST00000489357 SEC31BQ9NQW1 1179 aa9.95□□□□□ -0.82
VTI1A-207ENST00000489357 E7EWF7 191 aa9.94□□□□□ -0.82
VTI1A-207ENST00000489357 CPA1P15085 419 aa9.94□□□□□ -0.82
VTI1A-207ENST00000489357 ADD2P35612 726 aa9.94□□□□□ -0.82
VTI1A-207ENST00000489357 IGHMBP2P38935 993 aaKnown RBP9.94□□□□□ -0.82
VTI1A-207ENST00000489357 FGD1P98174 961 aa9.94□□□□□ -0.82
VTI1A-207ENST00000489357 RASSF7Q02833 373 aa9.94□□□□□ -0.82
VTI1A-207ENST00000489357 ST3GAL1Q11201 340 aa9.94□□□□□ -0.82
VTI1A-207ENST00000489357 ALX1Q15699 326 aa9.94□□□□□ -0.82
VTI1A-207ENST00000489357 CCDC183Q5T5S1 534 aa9.94□□□□□ -0.82
VTI1A-207ENST00000489357 NAA16Q6N069 864 aaPredicted RBP9.94□□□□□ -0.82
VTI1A-207ENST00000489357 RTKN2Q8IZC4 609 aa9.94□□□□□ -0.82
VTI1A-207ENST00000489357 MPHOSPH8Q99549 860 aa9.94□□□□□ -0.82
VTI1A-207ENST00000489357 MTA3Q9BTC8 594 aa9.94□□□□□ -0.82
VTI1A-207ENST00000489357 BRPF3Q9ULD4 1205 aa9.94□□□□□ -0.82
VTI1A-207ENST00000489357 A0A1B0GUL6 1792 aa9.93□□□□□ -0.82
VTI1A-207ENST00000489357 DUOX1Q9NRD9 1551 aa9.93□□□□□ -0.82
VTI1A-207ENST00000489357 ZC3H4Q9UPT8 1303 aaKnown RBP9.93□□□□□ -0.82
VTI1A-207ENST00000489357 GOLGA8CPA6NN73 597 aa9.93□□□□□ -0.82
VTI1A-207ENST00000489357 PPEF1O14829 653 aaPredicted RBP9.93□□□□□ -0.82
VTI1A-207ENST00000489357 GNAT2P19087 354 aa9.93□□□□□ -0.82
VTI1A-207ENST00000489357 ADORA1P30542 326 aa9.93□□□□□ -0.82
VTI1A-207ENST00000489357 MCM5P33992 734 aa9.93□□□□□ -0.82
VTI1A-207ENST00000489357 MCAMP43121 646 aa9.93□□□□□ -0.82
VTI1A-207ENST00000489357 ZAP70P43403 619 aa9.93□□□□□ -0.82
VTI1A-207ENST00000489357 CCDC93Q567U6 631 aa9.93□□□□□ -0.82
VTI1A-207ENST00000489357 C9orf131Q5VYM1 1079 aa9.93□□□□□ -0.82
VTI1A-207ENST00000489357 CCDC102BQ68D86 513 aa9.93□□□□□ -0.82
VTI1A-207ENST00000489357 Q6ZUG5 572 aa9.93□□□□□ -0.82
VTI1A-207ENST00000489357 USP48Q86UV5 1035 aa9.93□□□□□ -0.82
VTI1A-207ENST00000489357 GAS2L3Q86XJ1 694 aa9.93□□□□□ -0.82
VTI1A-207ENST00000489357 NCOA7Q8NI08 942 aa9.93□□□□□ -0.82
VTI1A-207ENST00000489357 ZNF526Q8TF50 670 aaPredicted RBP9.93□□□□□ -0.82
VTI1A-207ENST00000489357 NLRP7Q8WX94 980 aa9.93□□□□□ -0.82
VTI1A-207ENST00000489357 OSBP2Q969R2 916 aa9.93□□□□□ -0.82
VTI1A-207ENST00000489357 SEC62Q99442 399 aaKnown RBP9.93□□□□□ -0.82
VTI1A-207ENST00000489357 VPS33BQ9H267 617 aa9.93□□□□□ -0.82
VTI1A-207ENST00000489357 BSDC1Q9NW68 430 aaPredicted RBP9.93□□□□□ -0.82
VTI1A-207ENST00000489357 PODXL2Q9NZ53 605 aa9.93□□□□□ -0.82
VTI1A-207ENST00000489357 TMEM63CQ9P1W3 806 aa9.93□□□□□ -0.82
VTI1A-207ENST00000489357 PDS5AQ29RF7 1337 aaKnown RBP9.92□□□□□ -0.82
VTI1A-207ENST00000489357 ZNF213O14771 459 aa9.92□□□□□ -0.82
VTI1A-207ENST00000489357 LMNB1P20700 586 aa9.92□□□□□ -0.82
VTI1A-207ENST00000489357 CLCN1P35523 988 aa9.92□□□□□ -0.82
VTI1A-207ENST00000489357 NT5C2P49902 561 aa9.92□□□□□ -0.82
VTI1A-207ENST00000489357 MDM2Q00987 491 aaPredicted RBP9.92□□□□□ -0.82
VTI1A-207ENST00000489357 MAP3K12Q12852 859 aa9.92□□□□□ -0.82
VTI1A-207ENST00000489357 WASHC4Q2M389 1173 aa9.92□□□□□ -0.82
VTI1A-207ENST00000489357 UVSSAQ2YD98 709 aa9.92□□□□□ -0.82
VTI1A-207ENST00000489357 CCDC129Q6ZRS4 1044 aa9.92□□□□□ -0.82
VTI1A-207ENST00000489357 RALYLQ86SE5 291 aaKnown RBP9.92□□□□□ -0.82
VTI1A-207ENST00000489357 TRIM44Q96DX7 344 aaPredicted RBP9.92□□□□□ -0.82
VTI1A-207ENST00000489357 ZFRQ96KR1 1074 aaKnown RBP9.92□□□□□ -0.82
VTI1A-207ENST00000489357 TMEM134Q9H6X4 195 aa9.92□□□□□ -0.82
VTI1A-207ENST00000489357 CFAP45Q9UL16 551 aa9.92□□□□□ -0.82
VTI1A-207ENST00000489357 TIAM2Q8IVF5 1701 aa9.91□□□□□ -0.82
VTI1A-207ENST00000489357 SALL1Q9NSC2 1324 aa9.91□□□□□ -0.82
VTI1A-207ENST00000489357 COL4A5P29400 1685 aa9.91□□□□□ -0.82
VTI1A-207ENST00000489357 VPS37CA5D8V6 355 aaPredicted RBP9.91□□□□□ -0.82
VTI1A-207ENST00000489357 M0R2C6 588 aa9.91□□□□□ -0.82
VTI1A-207ENST00000489357 GPAA1O43292 621 aa9.91□□□□□ -0.82
VTI1A-207ENST00000489357 TRDNQ13061 729 aa9.91□□□□□ -0.82
VTI1A-207ENST00000489357 SCARF1Q14162 830 aa9.91□□□□□ -0.82
VTI1A-207ENST00000489357 TTLL12Q14166 644 aaPredicted RBP9.91□□□□□ -0.82
VTI1A-207ENST00000489357 SLC9C2Q5TAH2 1124 aa9.91□□□□□ -0.82
VTI1A-207ENST00000489357 STOX1Q6ZVD7 989 aa9.91□□□□□ -0.82
VTI1A-207ENST00000489357 NECAB1Q8N987 351 aa9.91□□□□□ -0.82
VTI1A-207ENST00000489357 SPATA5Q8NB90 893 aa9.91□□□□□ -0.82
VTI1A-207ENST00000489357 BRF1Q92994 677 aa9.91□□□□□ -0.82
VTI1A-207ENST00000489357 TAOK3Q9H2K8 898 aa9.91□□□□□ -0.82
VTI1A-207ENST00000489357 TSPY26PQ9H489 355 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 165.5 ms