RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 SEPT6Q14141 434 aa7.15□□□□□ -1.26
ITGB1-214ENST00000488427 CWF19L2Q2TBE0 894 aaKnown RBP7.15□□□□□ -1.26
ITGB1-214ENST00000488427 CYP27C1Q4G0S4 372 aa7.15□□□□□ -1.26
ITGB1-214ENST00000488427 GATAD2BQ8WXI9 593 aa7.15□□□□□ -1.26
ITGB1-214ENST00000488427 JARID2Q92833 1246 aaPredicted RBP7.15□□□□□ -1.26
ITGB1-214ENST00000488427 RHOVQ96L33 236 aa7.15□□□□□ -1.26
ITGB1-214ENST00000488427 KBTBD4Q9NVX7 518 aa7.15□□□□□ -1.26
ITGB1-214ENST00000488427 PRAMEF27A3QJZ7 478 aa7.14□□□□□ -1.27
ITGB1-214ENST00000488427 MINDY4BA8MYZ0 360 aa7.14□□□□□ -1.27
ITGB1-214ENST00000488427 RECKO95980 971 aa7.14□□□□□ -1.27
ITGB1-214ENST00000488427 PF4P02776 101 aa7.14□□□□□ -1.27
ITGB1-214ENST00000488427 HCLS1P14317 486 aaPredicted RBP7.14□□□□□ -1.27
ITGB1-214ENST00000488427 ZBTB37Q5TC79 503 aa7.14□□□□□ -1.27
ITGB1-214ENST00000488427 PLPPR2Q96GM1 343 aa7.14□□□□□ -1.27
ITGB1-214ENST00000488427 SPATA32Q96LK8 384 aa7.14□□□□□ -1.27
ITGB1-214ENST00000488427 TBC1D32Q96NH3 1257 aa7.14□□□□□ -1.27
ITGB1-214ENST00000488427 OSBPL1AQ9BXW6 950 aa7.14□□□□□ -1.27
ITGB1-214ENST00000488427 TLR6Q9Y2C9 796 aa7.14□□□□□ -1.27
ITGB1-214ENST00000488427 KIAA1324LA8MWY0 1029 aaPredicted RBP7.13□□□□□ -1.27
ITGB1-214ENST00000488427 E9PSI1 815 aa7.13□□□□□ -1.27
ITGB1-214ENST00000488427 TGFB1P01137 390 aa7.13□□□□□ -1.27
ITGB1-214ENST00000488427 RBM25P49756 843 aaKnown RBP7.13□□□□□ -1.27
ITGB1-214ENST00000488427 FANCCQ00597 558 aa7.13□□□□□ -1.27
ITGB1-214ENST00000488427 MPP2Q14168 576 aa7.13□□□□□ -1.27
ITGB1-214ENST00000488427 PPM1JQ5JR12 505 aa7.13□□□□□ -1.27
ITGB1-214ENST00000488427 RASIP1Q5U651 963 aa7.13□□□□□ -1.27
ITGB1-214ENST00000488427 INTS5Q6P9B9 1019 aaKnown RBP7.13□□□□□ -1.27
ITGB1-214ENST00000488427 LRFN4Q6PJG9 635 aa7.13□□□□□ -1.27
ITGB1-214ENST00000488427 CYFIP1Q7L576 1253 aa7.13□□□□□ -1.27
ITGB1-214ENST00000488427 ZAR1Q86SH2 424 aa7.13□□□□□ -1.27
ITGB1-214ENST00000488427 USP48Q86UV5 1035 aa7.13□□□□□ -1.27
ITGB1-214ENST00000488427 C12orf40Q86WS4 652 aa7.13□□□□□ -1.27
ITGB1-214ENST00000488427 HID1Q8IV36 788 aa7.13□□□□□ -1.27
ITGB1-214ENST00000488427 GOLM1Q8NBJ4 401 aa7.13□□□□□ -1.27
ITGB1-214ENST00000488427 WNT10AQ9GZT5 417 aa7.13□□□□□ -1.27
ITGB1-214ENST00000488427 PRKAG2Q9UGJ0 569 aa7.13□□□□□ -1.27
ITGB1-214ENST00000488427 PCDHB5Q9Y5E4 795 aa7.13□□□□□ -1.27
ITGB1-214ENST00000488427 CILPO75339 1184 aa7.12□□□□□ -1.27
ITGB1-214ENST00000488427 YBX3P16989 372 aaKnown RBP eCLIP7.12□□□□□ -1.27
ITGB1-214ENST00000488427 GP2P55259 537 aaKnown RBP7.12□□□□□ -1.27
ITGB1-214ENST00000488427 ZNF746Q6NUN9 644 aaPredicted RBP7.12□□□□□ -1.27
ITGB1-214ENST00000488427 FAM196AQ6ZSG2 479 aa7.12□□□□□ -1.27
ITGB1-214ENST00000488427 KIAA0825Q8IV33 1275 aa7.12□□□□□ -1.27
ITGB1-214ENST00000488427 ZNF654Q8IZM8 581 aa7.12□□□□□ -1.27
ITGB1-214ENST00000488427 ISL2Q96A47 359 aa7.12□□□□□ -1.27
ITGB1-214ENST00000488427 FMNL2Q96PY5 1086 aa7.12□□□□□ -1.27
ITGB1-214ENST00000488427 ADAM30Q9UKF2 790 aa7.12□□□□□ -1.27
ITGB1-214ENST00000488427 LEMD3Q9Y2U8 911 aa7.12□□□□□ -1.27
ITGB1-214ENST00000488427 CSADQ9Y600 493 aa7.12□□□□□ -1.27
ITGB1-214ENST00000488427 RING1Q06587 406 aa7.11□□□□□ -1.27
ITGB1-214ENST00000488427 MPRIPQ6WCQ1 1025 aa7.11□□□□□ -1.27
ITGB1-214ENST00000488427 FBXL6Q8N531 539 aa7.11□□□□□ -1.27
ITGB1-214ENST00000488427 MFSD14AQ96MC6 490 aa7.11□□□□□ -1.27
ITGB1-214ENST00000488427 SPON2Q9BUD6 331 aa7.11□□□□□ -1.27
ITGB1-214ENST00000488427 KCNQ5Q9NR82 932 aa7.11□□□□□ -1.27
ITGB1-214ENST00000488427 OAS3Q9Y6K5 1087 aaKnown RBP7.11□□□□□ -1.27
ITGB1-214ENST00000488427 WDR64B1ANS9 1081 aa7.1□□□□□ -1.27
ITGB1-214ENST00000488427 LRIG2O94898 1065 aa7.1□□□□□ -1.27
ITGB1-214ENST00000488427 MED26O95402 600 aa7.1□□□□□ -1.27
ITGB1-214ENST00000488427 F13A1P00488 732 aa7.1□□□□□ -1.27
ITGB1-214ENST00000488427 TAL1P17542 331 aaPredicted RBP7.1□□□□□ -1.27
ITGB1-214ENST00000488427 CAP2P40123 477 aa7.1□□□□□ -1.27
ITGB1-214ENST00000488427 YARSP54577 528 aaKnown RBP7.1□□□□□ -1.27
ITGB1-214ENST00000488427 FAM160A1Q05DH4 1040 aa7.1□□□□□ -1.27
ITGB1-214ENST00000488427 PTPN11Q06124 597 aaPredicted RBP7.1□□□□□ -1.27
ITGB1-214ENST00000488427 APOBRQ0VD83 1088 aa7.1□□□□□ -1.27
ITGB1-214ENST00000488427 INPP5AQ14642 412 aa7.1□□□□□ -1.27
ITGB1-214ENST00000488427 MFSD2AQ8NA29 543 aa7.1□□□□□ -1.27
ITGB1-214ENST00000488427 ZNF296Q8WUU4 475 aaPredicted RBP7.1□□□□□ -1.27
ITGB1-214ENST00000488427 LRRC3Q9BY71 257 aa7.1□□□□□ -1.27
ITGB1-214ENST00000488427 KRTAP4-8A0A0G2JLE6 195 aa7.09□□□□□ -1.27
ITGB1-214ENST00000488427 FAM221AA4D161 298 aa7.09□□□□□ -1.27
ITGB1-214ENST00000488427 PGRP06401 933 aa7.09□□□□□ -1.27
ITGB1-214ENST00000488427 NEFMP07197 916 aa7.09□□□□□ -1.27
ITGB1-214ENST00000488427 GRK4P32298 578 aa7.09□□□□□ -1.27
ITGB1-214ENST00000488427 OGFOD3Q6PK18 319 aa7.09□□□□□ -1.27
ITGB1-214ENST00000488427 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.09□□□□□ -1.27
ITGB1-214ENST00000488427 BNC2Q6ZN30 1099 aaPredicted RBP7.09□□□□□ -1.27
ITGB1-214ENST00000488427 ARHGAP27Q6ZUM4 889 aa7.09□□□□□ -1.27
ITGB1-214ENST00000488427 REC114Q7Z4M0 266 aa7.09□□□□□ -1.27
ITGB1-214ENST00000488427 SHKBP1Q8TBC3 707 aa7.09□□□□□ -1.27
ITGB1-214ENST00000488427 COX4I2Q96KJ9 171 aa7.09□□□□□ -1.27
ITGB1-214ENST00000488427 PIM2Q9P1W9 311 aa7.09□□□□□ -1.27
ITGB1-214ENST00000488427 KIAA1522Q9P206 1035 aaPredicted RBP7.09□□□□□ -1.27
ITGB1-214ENST00000488427 GTF2IRD1Q9UHL9 959 aa7.09□□□□□ -1.27
ITGB1-214ENST00000488427 UNCXA6NJT0 531 aa7.08□□□□□ -1.28
ITGB1-214ENST00000488427 GFRA2O00451 464 aa7.08□□□□□ -1.28
ITGB1-214ENST00000488427 TCF3P15923 654 aa7.08□□□□□ -1.28
ITGB1-214ENST00000488427 ZNF165P49910 485 aa7.08□□□□□ -1.28
ITGB1-214ENST00000488427 CHMP4BP1P59074 171 aa7.08□□□□□ -1.28
ITGB1-214ENST00000488427 SLC6A19Q695T7 634 aa7.08□□□□□ -1.28
ITGB1-214ENST00000488427 ZDHHC13Q8IUH4 622 aa7.08□□□□□ -1.28
ITGB1-214ENST00000488427 NT5C1AQ9BXI3 368 aa7.08□□□□□ -1.28
ITGB1-214ENST00000488427 FOXQ1Q9C009 403 aa7.08□□□□□ -1.28
ITGB1-214ENST00000488427 COPRSQ9NQ92 184 aa7.08□□□□□ -1.28
ITGB1-214ENST00000488427 F6X3S4 739 aa7.07□□□□□ -1.28
ITGB1-214ENST00000488427 GREM1O60565 184 aa7.07□□□□□ -1.28
ITGB1-214ENST00000488427 IMPDH2P12268 514 aa7.07□□□□□ -1.28
ITGB1-214ENST00000488427 PLCG1P19174 1290 aa7.07□□□□□ -1.28
ITGB1-214ENST00000488427 CYP7A1P22680 504 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms