RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 DYNLL2Q96FJ2 89 aa8.14□□□□□ -1.11
PDAP1-203ENST00000488214 INTS4Q96HW7 963 aaKnown RBP8.14□□□□□ -1.11
PDAP1-203ENST00000488214 ZKSCAN3Q9BRR0 538 aa8.14□□□□□ -1.11
PDAP1-203ENST00000488214 UBAC1Q9BSL1 405 aa8.14□□□□□ -1.11
PDAP1-203ENST00000488214 OSBPL5Q9H0X9 879 aaPredicted RBP8.14□□□□□ -1.11
PDAP1-203ENST00000488214 DDX4Q9NQI0 724 aaKnown RBP8.14□□□□□ -1.11
PDAP1-203ENST00000488214 TMOD2Q9NZR1 351 aa8.14□□□□□ -1.11
PDAP1-203ENST00000488214 CHMP5Q9NZZ3 219 aa8.14□□□□□ -1.11
PDAP1-203ENST00000488214 MKRN1Q9UHC7 482 aaKnown RBP8.14□□□□□ -1.11
PDAP1-203ENST00000488214 CIZ1Q9ULV3 898 aaPredicted RBP8.14□□□□□ -1.11
PDAP1-203ENST00000488214 ANGEL1Q9UNK9 670 aaKnown RBP8.14□□□□□ -1.11
PDAP1-203ENST00000488214 SMC3Q9UQE7 1217 aa8.14□□□□□ -1.11
PDAP1-203ENST00000488214 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.14□□□□□ -1.11
PDAP1-203ENST00000488214 COL2A1P02458 1487 aaPredicted RBP8.13□□□□□ -1.11
PDAP1-203ENST00000488214 TNKSO95271 1327 aa8.13□□□□□ -1.11
PDAP1-203ENST00000488214 ERICH2A1L162 156 aa8.13□□□□□ -1.11
PDAP1-203ENST00000488214 ORC4O43929 436 aa8.13□□□□□ -1.11
PDAP1-203ENST00000488214 HLA-DOAP06340 250 aa8.13□□□□□ -1.11
PDAP1-203ENST00000488214 PCP11498 1178 aaKnown RBP8.13□□□□□ -1.11
PDAP1-203ENST00000488214 DDIT3P35638 169 aa8.13□□□□□ -1.11
PDAP1-203ENST00000488214 NFIAQ12857 509 aa8.13□□□□□ -1.11
PDAP1-203ENST00000488214 TNIP1Q15025 636 aa8.13□□□□□ -1.11
PDAP1-203ENST00000488214 MICU3Q86XE3 530 aa8.13□□□□□ -1.11
PDAP1-203ENST00000488214 OGFOD1Q8N543 542 aa8.13□□□□□ -1.11
PDAP1-203ENST00000488214 SLC44A5Q8NCS7 719 aa8.13□□□□□ -1.11
PDAP1-203ENST00000488214 AGBL3Q8NEM8 1001 aa8.13□□□□□ -1.11
PDAP1-203ENST00000488214 TMEM87BQ96K49 555 aa8.13□□□□□ -1.11
PDAP1-203ENST00000488214 SYT17Q9BSW7 474 aa8.13□□□□□ -1.11
PDAP1-203ENST00000488214 AGXT2Q9BYV1 514 aa8.13□□□□□ -1.11
PDAP1-203ENST00000488214 LY9Q9HBG7 655 aa8.13□□□□□ -1.11
PDAP1-203ENST00000488214 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.13□□□□□ -1.11
PDAP1-203ENST00000488214 GJA3Q9Y6H8 435 aa8.13□□□□□ -1.11
PDAP1-203ENST00000488214 SHTN1A0MZ66 631 aa8.12□□□□□ -1.11
PDAP1-203ENST00000488214 CLRN2A0PK11 232 aa8.12□□□□□ -1.11
PDAP1-203ENST00000488214 SPDYE2BA6NHP3 402 aa8.12□□□□□ -1.11
PDAP1-203ENST00000488214 CCDC69A6NI79 296 aa8.12□□□□□ -1.11
PDAP1-203ENST00000488214 TSPY2A6NKD2 308 aa8.12□□□□□ -1.11
PDAP1-203ENST00000488214 GOLGA8AA7E2F4 631 aa8.12□□□□□ -1.11
PDAP1-203ENST00000488214 PFKFB2O60825 505 aa8.12□□□□□ -1.11
PDAP1-203ENST00000488214 DTNBO60941 627 aa8.12□□□□□ -1.11
PDAP1-203ENST00000488214 SPDYE6P0CI01 402 aa8.12□□□□□ -1.11
PDAP1-203ENST00000488214 YBX3P16989 372 aaKnown RBP eCLIP8.12□□□□□ -1.11
PDAP1-203ENST00000488214 RXRAP19793 462 aa8.12□□□□□ -1.11
PDAP1-203ENST00000488214 LMNB1P20700 586 aa8.12□□□□□ -1.11
PDAP1-203ENST00000488214 GJB2P29033 226 aa8.12□□□□□ -1.11
PDAP1-203ENST00000488214 METAP2P50579 478 aaKnown RBP eCLIP8.12□□□□□ -1.11
PDAP1-203ENST00000488214 PLCD1P51178 756 aa8.12□□□□□ -1.11
PDAP1-203ENST00000488214 SCRN1Q12765 414 aa8.12□□□□□ -1.11
PDAP1-203ENST00000488214 TCP10Q12799 353 aa8.12□□□□□ -1.11
PDAP1-203ENST00000488214 WTAPQ15007 396 aa8.12□□□□□ -1.11
PDAP1-203ENST00000488214 DLGAP5Q15398 846 aa8.12□□□□□ -1.11
PDAP1-203ENST00000488214 FAM47AQ5JRC9 791 aa8.12□□□□□ -1.11
PDAP1-203ENST00000488214 C16orf86Q6ZW13 317 aa8.12□□□□□ -1.11
PDAP1-203ENST00000488214 IQCA1Q86XH1 822 aa8.12□□□□□ -1.11
PDAP1-203ENST00000488214 GMLQ99445 158 aa8.12□□□□□ -1.11
PDAP1-203ENST00000488214 MYL10Q9BUA6 226 aa8.12□□□□□ -1.11
PDAP1-203ENST00000488214 TDRD3Q9H7E2 651 aaKnown RBP8.12□□□□□ -1.11
PDAP1-203ENST00000488214 MKNK2Q9HBH9 465 aa8.12□□□□□ -1.11
PDAP1-203ENST00000488214 VEZTQ9HBM0 779 aa8.12□□□□□ -1.11
PDAP1-203ENST00000488214 SENP2Q9HC62 589 aa8.12□□□□□ -1.11
PDAP1-203ENST00000488214 NCOA5Q9HCD5 579 aaKnown RBP8.12□□□□□ -1.11
PDAP1-203ENST00000488214 CWC22Q9HCG8 908 aaKnown RBP8.12□□□□□ -1.11
PDAP1-203ENST00000488214 ZSWIM5Q9P217 1185 aa8.12□□□□□ -1.11
PDAP1-203ENST00000488214 BRPF3Q9ULD4 1205 aa8.12□□□□□ -1.11
PDAP1-203ENST00000488214 DOCK1Q14185 1865 aa8.11□□□□□ -1.11
PDAP1-203ENST00000488214 PTPDC1A2A3K4 754 aa8.11□□□□□ -1.11
PDAP1-203ENST00000488214 JAK2O60674 1132 aa8.11□□□□□ -1.11
PDAP1-203ENST00000488214 FGRP09769 529 aa8.11□□□□□ -1.11
PDAP1-203ENST00000488214 TSPY3P0CV98 308 aa8.11□□□□□ -1.11
PDAP1-203ENST00000488214 TSPY8P0CW00 308 aa8.11□□□□□ -1.11
PDAP1-203ENST00000488214 RPS12P25398 132 aaKnown RBP8.11□□□□□ -1.11
PDAP1-203ENST00000488214 PDIA3P30101 505 aaKnown RBP8.11□□□□□ -1.11
PDAP1-203ENST00000488214 CDK8P49336 464 aa8.11□□□□□ -1.11
PDAP1-203ENST00000488214 GMPSP49915 693 aaPredicted RBP8.11□□□□□ -1.11
PDAP1-203ENST00000488214 CCT2P78371 535 aaKnown RBP8.11□□□□□ -1.11
PDAP1-203ENST00000488214 MAPK8IP2Q13387 824 aaPredicted RBP8.11□□□□□ -1.11
PDAP1-203ENST00000488214 APOA5Q6Q788 366 aa8.11□□□□□ -1.11
PDAP1-203ENST00000488214 TTC6Q86TZ1 520 aa8.11□□□□□ -1.11
PDAP1-203ENST00000488214 ZSCAN29Q8IWY8 852 aaPredicted RBP8.11□□□□□ -1.11
PDAP1-203ENST00000488214 CCDC144CPQ8IYA2 1237 aa8.11□□□□□ -1.11
PDAP1-203ENST00000488214 FBXL16Q8N461 479 aa8.11□□□□□ -1.11
PDAP1-203ENST00000488214 CRACR2BQ8N4Y2 399 aaPredicted RBP8.11□□□□□ -1.11
PDAP1-203ENST00000488214 IGDCC4Q8TDY8 1250 aa8.11□□□□□ -1.11
PDAP1-203ENST00000488214 PRMT6Q96LA8 375 aaPredicted RBP8.11□□□□□ -1.11
PDAP1-203ENST00000488214 ZSCAN10Q96SZ4 725 aaPredicted RBP8.11□□□□□ -1.11
PDAP1-203ENST00000488214 MRIQ9BWK5 157 aa8.11□□□□□ -1.11
PDAP1-203ENST00000488214 IDI2Q9BXS1 227 aa8.11□□□□□ -1.11
PDAP1-203ENST00000488214 TRIM34Q9BYJ4 488 aa8.11□□□□□ -1.11
PDAP1-203ENST00000488214 ZNF287Q9HBT7 754 aa8.11□□□□□ -1.11
PDAP1-203ENST00000488214 FAM198AQ9UFP1 575 aa8.11□□□□□ -1.11
PDAP1-203ENST00000488214 SLC12A7Q9Y666 1083 aa8.11□□□□□ -1.11
PDAP1-203ENST00000488214 NID2Q14112 1375 aa8.1□□□□□ -1.11
PDAP1-203ENST00000488214 ATRNL1Q5VV63 1379 aa8.1□□□□□ -1.11
PDAP1-203ENST00000488214 PLIN4Q96Q06 1357 aa8.1□□□□□ -1.11
PDAP1-203ENST00000488214 TCHHQ07283 1943 aa8.1□□□□□ -1.11
PDAP1-203ENST00000488214 TCP10L2B9ZVM9 353 aa8.1□□□□□ -1.11
PDAP1-203ENST00000488214 FZD9O00144 591 aa8.1□□□□□ -1.11
PDAP1-203ENST00000488214 CPLX1O14810 134 aa8.1□□□□□ -1.11
PDAP1-203ENST00000488214 ZBTB43O43298 467 aa8.1□□□□□ -1.11
PDAP1-203ENST00000488214 MYO1BO43795 1136 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms