RNA–Protein interactions for RNA: ENST00000488196.5

STRADB-209, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 3

Gene STRADB, Length 424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-209ENST00000488196 GPR25O00155 361 aa28.27■■■□□ 2.12
STRADB-209ENST00000488196 CTNND1O60716 968 aaKnown RBP28.27■■■□□ 2.12
STRADB-209ENST00000488196 SNAPC2Q13487 334 aa28.27■■■□□ 2.12
STRADB-209ENST00000488196 ANKRD45Q5TZF3 282 aa28.27■■■□□ 2.12
STRADB-209ENST00000488196 PICK1Q9NRD5 415 aa28.27■■■□□ 2.12
STRADB-209ENST00000488196 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.27■■■□□ 2.12
STRADB-209ENST00000488196 DOCK1Q14185 1865 aa28.27■■■□□ 2.12
STRADB-209ENST00000488196 CETPP11597 493 aa28.26■■■□□ 2.11
STRADB-209ENST00000488196 PTPRAP18433 802 aa28.26■■■□□ 2.11
STRADB-209ENST00000488196 ADD2P35612 726 aa28.26■■■□□ 2.11
STRADB-209ENST00000488196 FAM43AQ8N2R8 423 aa28.26■■■□□ 2.11
STRADB-209ENST00000488196 ZNF296Q8WUU4 475 aaPredicted RBP28.26■■■□□ 2.11
STRADB-209ENST00000488196 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.26■■■□□ 2.11
STRADB-209ENST00000488196 RRP1BQ14684 758 aaKnown RBP28.25■■■□□ 2.11
STRADB-209ENST00000488196 GCC1Q96CN9 775 aa28.25■■■□□ 2.11
STRADB-209ENST00000488196 HERC5Q9UII4 1024 aaKnown RBP28.25■■■□□ 2.11
STRADB-209ENST00000488196 KCNH4Q9UQ05 1017 aa28.25■■■□□ 2.11
STRADB-209ENST00000488196 ZHX2Q9Y6X8 837 aa28.25■■■□□ 2.11
STRADB-209ENST00000488196 CRHR2Q13324 411 aa28.24■■■□□ 2.11
STRADB-209ENST00000488196 CCDC84Q86UT8 332 aaPredicted RBP28.24■■■□□ 2.11
STRADB-209ENST00000488196 LCORLQ8N3X6 602 aa28.24■■■□□ 2.11
STRADB-209ENST00000488196 IRX6P78412 446 aaPredicted RBP28.23■■■□□ 2.11
STRADB-209ENST00000488196 DNAJC18Q9H819 358 aa28.23■■■□□ 2.11
STRADB-209ENST00000488196 ARMT1Q9H993 441 aa28.23■■■□□ 2.11
STRADB-209ENST00000488196 ZBTB47Q9UFB7 747 aaPredicted RBP28.23■■■□□ 2.11
STRADB-209ENST00000488196 TTC41PQ6P2S7 1318 aa28.22■■■□□ 2.11
STRADB-209ENST00000488196 BTBD19C9JJ37 291 aa28.22■■■□□ 2.11
STRADB-209ENST00000488196 DGKZQ13574 1117 aa28.22■■■□□ 2.11
STRADB-209ENST00000488196 FOXP4Q8IVH2 680 aaPredicted RBP28.22■■■□□ 2.11
STRADB-209ENST00000488196 CRACR2BQ8N4Y2 399 aaPredicted RBP28.22■■■□□ 2.11
STRADB-209ENST00000488196 CRNKL1Q9BZJ0 848 aaKnown RBP28.22■■■□□ 2.11
STRADB-209ENST00000488196 PHIPQ8WWQ0 1821 aa28.22■■■□□ 2.11
STRADB-209ENST00000488196 ATAD5Q96QE3 1844 aa28.22■■■□□ 2.11
STRADB-209ENST00000488196 IGHDP01880 384 aa28.21■■■□□ 2.11
STRADB-209ENST00000488196 HLA-DOAP06340 250 aa28.21■■■□□ 2.11
STRADB-209ENST00000488196 CAP2P40123 477 aa28.21■■■□□ 2.11
STRADB-209ENST00000488196 NOM1Q5C9Z4 860 aaKnown RBP28.21■■■□□ 2.11
STRADB-209ENST00000488196 METTL16Q86W50 562 aaKnown RBP28.21■■■□□ 2.11
STRADB-209ENST00000488196 PI4K2BQ8TCG2 481 aa28.21■■■□□ 2.11
STRADB-209ENST00000488196 RWDD1Q9H446 243 aaPredicted RBP28.21■■■□□ 2.11
STRADB-209ENST00000488196 FKTNO75072 461 aa28.2■■■□□ 2.1
STRADB-209ENST00000488196 CAPN15O75808 1086 aa28.2■■■□□ 2.1
STRADB-209ENST00000488196 MBD4O95243 580 aa28.2■■■□□ 2.1
STRADB-209ENST00000488196 MX1P20591 662 aa28.2■■■□□ 2.1
STRADB-209ENST00000488196 UBE3CQ15386 1083 aa28.2■■■□□ 2.1
STRADB-209ENST00000488196 TAF1CQ15572 869 aaPredicted RBP28.2■■■□□ 2.1
STRADB-209ENST00000488196 KBTBD3Q8NAB2 608 aa28.2■■■□□ 2.1
STRADB-209ENST00000488196 SDR42E1Q8WUS8 393 aa28.2■■■□□ 2.1
STRADB-209ENST00000488196 TRIM34Q9BYJ4 488 aa28.2■■■□□ 2.1
STRADB-209ENST00000488196 MCOLN1Q9GZU1 580 aa28.2■■■□□ 2.1
STRADB-209ENST00000488196 AFG3L2Q9Y4W6 797 aa28.2■■■□□ 2.1
STRADB-209ENST00000488196 NAV1Q8NEY1 1877 aa28.19■■■□□ 2.1
STRADB-209ENST00000488196 CXCL11O14625 94 aa28.19■■■□□ 2.1
STRADB-209ENST00000488196 ERC2O15083 957 aa28.19■■■□□ 2.1
STRADB-209ENST00000488196 MOGSQ13724 837 aa28.19■■■□□ 2.1
STRADB-209ENST00000488196 ZSCAN25Q6NSZ9 544 aa28.19■■■□□ 2.1
STRADB-209ENST00000488196 SALL3Q9BXA9 1300 aa28.18■■■□□ 2.1
STRADB-209ENST00000488196 PTPRFP10586 1907 aa28.18■■■□□ 2.1
STRADB-209ENST00000488196 PRKAB2O43741 272 aa28.18■■■□□ 2.1
STRADB-209ENST00000488196 GLRX3O76003 335 aaKnown RBP28.17■■■□□ 2.1
STRADB-209ENST00000488196 JAG1P78504 1218 aa28.17■■■□□ 2.1
STRADB-209ENST00000488196 SHROOM1Q2M3G4 852 aaPredicted RBP28.17■■■□□ 2.1
STRADB-209ENST00000488196 B4GALNT3Q6L9W6 998 aa28.17■■■□□ 2.1
STRADB-209ENST00000488196 SMC5Q8IY18 1101 aa28.17■■■□□ 2.1
STRADB-209ENST00000488196 ABHD8Q96I13 439 aa28.17■■■□□ 2.1
STRADB-209ENST00000488196 PUS7LQ9H0K6 701 aaKnown RBP28.17■■■□□ 2.1
STRADB-209ENST00000488196 ZFYVE28Q9HCC9 887 aa28.17■■■□□ 2.1
STRADB-209ENST00000488196 DDX60LQ5H9U9 1706 aaKnown RBP28.17■■■□□ 2.1
STRADB-209ENST00000488196 TRIM75PA6NK02 468 aa28.16■■■□□ 2.1
STRADB-209ENST00000488196 POLR3DP05423 398 aaPredicted RBP28.16■■■□□ 2.1
STRADB-209ENST00000488196 PLCD1P51178 756 aa28.16■■■□□ 2.1
STRADB-209ENST00000488196 EVX2Q03828 476 aa28.16■■■□□ 2.1
STRADB-209ENST00000488196 CTU1Q7Z7A3 348 aaKnown RBP28.16■■■□□ 2.1
STRADB-209ENST00000488196 TTC6Q86TZ1 520 aa28.16■■■□□ 2.1
STRADB-209ENST00000488196 DCP1AQ9NPI6 582 aaPredicted RBP28.16■■■□□ 2.1
STRADB-209ENST00000488196 MCM9Q9NXL9 1143 aa28.16■■■□□ 2.1
STRADB-209ENST00000488196 A0A0G2JLL6 359 aaPredicted RBP28.15■■■□□ 2.1
STRADB-209ENST00000488196 GDF11O95390 407 aa28.15■■■□□ 2.1
STRADB-209ENST00000488196 PRRT2Q7Z6L0 340 aaPredicted RBP28.15■■■□□ 2.1
STRADB-209ENST00000488196 ANKRD23Q86SG2 305 aa28.15■■■□□ 2.1
STRADB-209ENST00000488196 LNPKQ9C0E8 428 aa28.15■■■□□ 2.1
STRADB-209ENST00000488196 ZCCHC17Q9NP64 241 aaKnown RBP28.15■■■□□ 2.1
STRADB-209ENST00000488196 SERPINB13Q9UIV8 391 aa28.15■■■□□ 2.1
STRADB-209ENST00000488196 BAZ2AQ9UIF9 1905 aaKnown RBP28.15■■■□□ 2.1
STRADB-209ENST00000488196 PDHXO00330 501 aa28.14■■■□□ 2.1
STRADB-209ENST00000488196 GPAT2Q6NUI2 795 aa28.14■■■□□ 2.1
STRADB-209ENST00000488196 EHD4Q9H223 541 aa28.14■■■□□ 2.1
STRADB-209ENST00000488196 USP17L5A8MUK1 530 aa28.13■■■□□ 2.09
STRADB-209ENST00000488196 RNF113AO15541 343 aaKnown RBP28.13■■■□□ 2.09
STRADB-209ENST00000488196 CYP2D6P10635 497 aa28.13■■■□□ 2.09
STRADB-209ENST00000488196 SPP2Q13103 211 aa28.13■■■□□ 2.09
STRADB-209ENST00000488196 GADL1Q6ZQY3 521 aa28.13■■■□□ 2.09
STRADB-209ENST00000488196 PDE1AP54750 535 aa28.12■■■□□ 2.09
STRADB-209ENST00000488196 ZNF280CQ8ND82 737 aa28.12■■■□□ 2.09
STRADB-209ENST00000488196 OSBP2Q969R2 916 aa28.12■■■□□ 2.09
STRADB-209ENST00000488196 STAP2Q9UGK3 403 aa28.12■■■□□ 2.09
STRADB-209ENST00000488196 SLC4A4Q9Y6R1 1079 aa28.12■■■□□ 2.09
STRADB-209ENST00000488196 ASNSP08243 561 aa28.11■■■□□ 2.09
STRADB-209ENST00000488196 SP3Q02447 781 aa28.11■■■□□ 2.09
STRADB-209ENST00000488196 TATDN1Q6P1N9 297 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms