RNA–Protein interactions for RNA: ENST00000487913.5

NR1H3-224, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 852 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-224ENST00000487913 TTYH1Q9H313 450 aaPredicted RBP16.86■□□□□ 0.29
NR1H3-224ENST00000487913 HMGCS2P54868 508 aa16.85■□□□□ 0.29
NR1H3-224ENST00000487913 CCDC27Q2M243 656 aa16.85■□□□□ 0.29
NR1H3-224ENST00000487913 SRCIN1Q9C0H9 1055 aa16.85■□□□□ 0.29
NR1H3-224ENST00000487913 DDX4Q9NQI0 724 aaKnown RBP16.85■□□□□ 0.29
NR1H3-224ENST00000487913 MORF4L1Q9UBU8 362 aa16.85■□□□□ 0.29
NR1H3-224ENST00000487913 FAM196BA6NMK8 535 aa16.84■□□□□ 0.29
NR1H3-224ENST00000487913 XRCC5P13010 732 aaKnown RBP16.84■□□□□ 0.29
NR1H3-224ENST00000487913 ZKSCAN1P17029 563 aaPredicted RBP16.84■□□□□ 0.29
NR1H3-224ENST00000487913 SHHQ15465 462 aa16.84■□□□□ 0.29
NR1H3-224ENST00000487913 CCL14Q16627 93 aa16.84■□□□□ 0.29
NR1H3-224ENST00000487913 C9orf50Q5SZB4 431 aa16.84■□□□□ 0.29
NR1H3-224ENST00000487913 NUDT12Q9BQG2 462 aa16.84■□□□□ 0.29
NR1H3-224ENST00000487913 SENP6Q9GZR1 1112 aaPredicted RBP16.84■□□□□ 0.29
NR1H3-224ENST00000487913 IL16Q14005 1332 aa16.84■□□□□ 0.29
NR1H3-224ENST00000487913 LOC285556D6RIA3 1793 aa16.83■□□□□ 0.28
NR1H3-224ENST00000487913 FOSL2P15408 326 aa16.83■□□□□ 0.28
NR1H3-224ENST00000487913 ATN1P54259 1190 aaPredicted RBP16.83■□□□□ 0.28
NR1H3-224ENST00000487913 EXOSC9Q06265 439 aaKnown RBP16.83■□□□□ 0.28
NR1H3-224ENST00000487913 PABPC4Q13310 644 aaKnown RBP eCLIP16.83■□□□□ 0.28
NR1H3-224ENST00000487913 PICALMQ13492 652 aa16.83■□□□□ 0.28
NR1H3-224ENST00000487913 ZNF280CQ8ND82 737 aa16.83■□□□□ 0.28
NR1H3-224ENST00000487913 SOCS4Q8WXH5 440 aa16.83■□□□□ 0.28
NR1H3-224ENST00000487913 UTYO14607 1347 aa16.82■□□□□ 0.28
NR1H3-224ENST00000487913 GAKO14976 1311 aa16.82■□□□□ 0.28
NR1H3-224ENST00000487913 TNFRSF10AO00220 468 aa16.82■□□□□ 0.28
NR1H3-224ENST00000487913 SLC5A1P13866 664 aa16.82■□□□□ 0.28
NR1H3-224ENST00000487913 LPIN2Q92539 896 aa16.82■□□□□ 0.28
NR1H3-224ENST00000487913 TXNRD2Q9NNW7 524 aa16.82■□□□□ 0.28
NR1H3-224ENST00000487913 MAST2Q6P0Q8 1798 aa16.82■□□□□ 0.28
NR1H3-224ENST00000487913 SALL1Q9NSC2 1324 aa16.81■□□□□ 0.28
NR1H3-224ENST00000487913 USP6NLQ92738 828 aa16.81■□□□□ 0.28
NR1H3-224ENST00000487913 PRKRIP1Q9H875 184 aaPredicted RBP16.81■□□□□ 0.28
NR1H3-224ENST00000487913 RRP1BQ14684 758 aaKnown RBP16.8■□□□□ 0.28
NR1H3-224ENST00000487913 TJAP1Q5JTD0 557 aa16.8■□□□□ 0.28
NR1H3-224ENST00000487913 TRMT44Q8IYL2 757 aaKnown RBP16.8■□□□□ 0.28
NR1H3-224ENST00000487913 USP38Q8NB14 1042 aa16.8■□□□□ 0.28
NR1H3-224ENST00000487913 P2RX7Q99572 595 aaKnown RBP16.8■□□□□ 0.28
NR1H3-224ENST00000487913 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.8■□□□□ 0.28
NR1H3-224ENST00000487913 CACNA1FO60840 1977 aa16.8■□□□□ 0.28
NR1H3-224ENST00000487913 MYH13Q9UKX3 1938 aa16.79■□□□□ 0.28
NR1H3-224ENST00000487913 TBC1D12O60347 775 aa16.79■□□□□ 0.28
NR1H3-224ENST00000487913 PLA2G5P39877 138 aa16.79■□□□□ 0.28
NR1H3-224ENST00000487913 RTP1P59025 263 aa16.79■□□□□ 0.28
NR1H3-224ENST00000487913 IRX3P78415 501 aaPredicted RBP16.79■□□□□ 0.28
NR1H3-224ENST00000487913 SMAD3P84022 425 aaKnown RBP16.79■□□□□ 0.28
NR1H3-224ENST00000487913 PDE3AQ14432 1141 aa16.79■□□□□ 0.28
NR1H3-224ENST00000487913 SH3D19Q5HYK7 790 aa16.79■□□□□ 0.28
NR1H3-224ENST00000487913 GPRC5AQ8NFJ5 357 aa16.79■□□□□ 0.28
NR1H3-224ENST00000487913 OSBPL5Q9H0X9 879 aaPredicted RBP16.79■□□□□ 0.28
NR1H3-224ENST00000487913 PORCNQ9H237 461 aa16.79■□□□□ 0.28
NR1H3-224ENST00000487913 PRKAG2Q9UGJ0 569 aa16.79■□□□□ 0.28
NR1H3-224ENST00000487913 LTBP2Q14767 1821 aa16.78■□□□□ 0.28
NR1H3-224ENST00000487913 EYA2O00167 538 aa16.78■□□□□ 0.28
NR1H3-224ENST00000487913 RGS2P41220 211 aa16.78■□□□□ 0.28
NR1H3-224ENST00000487913 MORN1Q5T089 497 aa16.78■□□□□ 0.28
NR1H3-224ENST00000487913 MAPK4P31152 587 aa16.77■□□□□ 0.28
NR1H3-224ENST00000487913 CAP2P40123 477 aa16.77■□□□□ 0.28
NR1H3-224ENST00000487913 BTDP43251 543 aa16.77■□□□□ 0.28
NR1H3-224ENST00000487913 PHKA1P46020 1223 aa16.77■□□□□ 0.28
NR1H3-224ENST00000487913 HERVK_113P62684 666 aa16.77■□□□□ 0.28
NR1H3-224ENST00000487913 MTMR2Q13614 643 aa16.77■□□□□ 0.28
NR1H3-224ENST00000487913 Q3C1V9 767 aa16.77■□□□□ 0.28
NR1H3-224ENST00000487913 GPR142Q7Z601 462 aa16.77■□□□□ 0.28
NR1H3-224ENST00000487913 APBA2Q99767 749 aa16.77■□□□□ 0.28
NR1H3-224ENST00000487913 GNL3LQ9NVN8 582 aaKnown RBP16.77■□□□□ 0.28
NR1H3-224ENST00000487913 RBPJLQ9UBG7 517 aa16.77■□□□□ 0.28
NR1H3-224ENST00000487913 DENND2AQ9ULE3 1009 aa16.77■□□□□ 0.28
NR1H3-224ENST00000487913 ATP11BQ9Y2G3 1177 aa16.77■□□□□ 0.28
NR1H3-224ENST00000487913 USP17L5A8MUK1 530 aa16.76■□□□□ 0.27
NR1H3-224ENST00000487913 RFX5P48382 616 aaPredicted RBP16.76■□□□□ 0.27
NR1H3-224ENST00000487913 POTEEQ6S8J3 1075 aa16.76■□□□□ 0.27
NR1H3-224ENST00000487913 ATG9AQ7Z3C6 839 aa16.76■□□□□ 0.27
NR1H3-224ENST00000487913 DZIP1Q86YF9 867 aaKnown RBP16.76■□□□□ 0.27
NR1H3-224ENST00000487913 BADQ92934 168 aa16.76■□□□□ 0.27
NR1H3-224ENST00000487913 TBC1D2Q9BYX2 928 aa16.76■□□□□ 0.27
NR1H3-224ENST00000487913 PRDM5Q9NQX1 630 aaPredicted RBP16.76■□□□□ 0.27
NR1H3-224ENST00000487913 TMEM265A0A087WTH1 108 aa16.75■□□□□ 0.27
NR1H3-224ENST00000487913 HOXA7P31268 230 aaPredicted RBP16.75■□□□□ 0.27
NR1H3-224ENST00000487913 RHBDL3P58872 404 aa16.75■□□□□ 0.27
NR1H3-224ENST00000487913 ERVK-9P63128 1117 aa16.75■□□□□ 0.27
NR1H3-224ENST00000487913 ERVK-24P63145 666 aa16.75■□□□□ 0.27
NR1H3-224ENST00000487913 ATP2B3Q16720 1220 aa16.75■□□□□ 0.27
NR1H3-224ENST00000487913 PLEKHH3Q7Z736 793 aa16.75■□□□□ 0.27
NR1H3-224ENST00000487913 FLRT1Q9NZU1 646 aa16.75■□□□□ 0.27
NR1H3-224ENST00000487913 DDX20Q9UHI6 824 aaKnown RBP16.75■□□□□ 0.27
NR1H3-224ENST00000487913 DNM1LO00429 736 aa16.74■□□□□ 0.27
NR1H3-224ENST00000487913 SEMA3EO15041 775 aa16.74■□□□□ 0.27
NR1H3-224ENST00000487913 BACE1P56817 501 aa16.74■□□□□ 0.27
NR1H3-224ENST00000487913 GRIN2CQ14957 1233 aa16.74■□□□□ 0.27
NR1H3-224ENST00000487913 CCAR1Q8IX12 1150 aaKnown RBP16.74■□□□□ 0.27
NR1H3-224ENST00000487913 LPAR1Q92633 364 aa16.74■□□□□ 0.27
NR1H3-224ENST00000487913 FAM122AQ96E09 287 aa16.74■□□□□ 0.27
NR1H3-224ENST00000487913 FAM163AQ96GL9 167 aaPredicted RBP16.74■□□□□ 0.27
NR1H3-224ENST00000487913 PAGR1Q9BTK6 254 aa16.74■□□□□ 0.27
NR1H3-224ENST00000487913 FRMPD3Q5JV73 1810 aa16.74■□□□□ 0.27
NR1H3-224ENST00000487913 MYH2Q9UKX2 1941 aa16.74■□□□□ 0.27
NR1H3-224ENST00000487913 MROH7-TTC4A0A0A0MT08 1334 aa16.73■□□□□ 0.27
NR1H3-224ENST00000487913 MAP2K5Q13163 448 aa16.73■□□□□ 0.27
NR1H3-224ENST00000487913 ZGPATQ8N5A5 531 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms