RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 DNAJC18Q9H819 358 aa13.74□□□□□ -0.21
RAB11FIP3-210ENST00000487899 RCAN3Q9UKA8 241 aa13.74□□□□□ -0.21
RAB11FIP3-210ENST00000487899 AFG3L2Q9Y4W6 797 aa13.74□□□□□ -0.21
RAB11FIP3-210ENST00000487899 CTNND1O60716 968 aaKnown RBP13.73□□□□□ -0.21
RAB11FIP3-210ENST00000487899 PPP4CP60510 307 aa13.73□□□□□ -0.21
RAB11FIP3-210ENST00000487899 RRP1BQ14684 758 aaKnown RBP13.73□□□□□ -0.21
RAB11FIP3-210ENST00000487899 AACSQ86V21 672 aa13.73□□□□□ -0.21
RAB11FIP3-210ENST00000487899 ERC1Q8IUD2 1116 aa13.73□□□□□ -0.21
RAB11FIP3-210ENST00000487899 ANTXR1Q9H6X2 564 aa13.73□□□□□ -0.21
RAB11FIP3-210ENST00000487899 IL1RAPL2Q9NP60 686 aa13.73□□□□□ -0.21
RAB11FIP3-210ENST00000487899 PICK1Q9NRD5 415 aa13.73□□□□□ -0.21
RAB11FIP3-210ENST00000487899 DDX19BQ9UMR2 479 aa13.73□□□□□ -0.21
RAB11FIP3-210ENST00000487899 PTCH2Q9Y6C5 1203 aa13.73□□□□□ -0.21
RAB11FIP3-210ENST00000487899 FRMPD3Q5JV73 1810 aa13.73□□□□□ -0.21
RAB11FIP3-210ENST00000487899 POTEFA5A3E0 1075 aa13.72□□□□□ -0.21
RAB11FIP3-210ENST00000487899 CXCL11O14625 94 aa13.72□□□□□ -0.21
RAB11FIP3-210ENST00000487899 MS4A1P11836 297 aa13.72□□□□□ -0.21
RAB11FIP3-210ENST00000487899 C20orf194Q5TEA3 1177 aa13.72□□□□□ -0.21
RAB11FIP3-210ENST00000487899 RHPN1Q8TCX5 695 aa13.72□□□□□ -0.21
RAB11FIP3-210ENST00000487899 PARK7Q99497 189 aaKnown RBP13.72□□□□□ -0.21
RAB11FIP3-210ENST00000487899 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.72□□□□□ -0.21
RAB11FIP3-210ENST00000487899 CPA4Q9UI42 421 aa13.72□□□□□ -0.21
RAB11FIP3-210ENST00000487899 ZHX2Q9Y6X8 837 aa13.72□□□□□ -0.21
RAB11FIP3-210ENST00000487899 GREB1LQ9C091 1923 aaPredicted RBP13.72□□□□□ -0.21
RAB11FIP3-210ENST00000487899 RLFQ13129 1914 aa13.71□□□□□ -0.21
RAB11FIP3-210ENST00000487899 TRIM75PA6NK02 468 aa13.71□□□□□ -0.21
RAB11FIP3-210ENST00000487899 IGSF3O75054 1194 aa13.71□□□□□ -0.21
RAB11FIP3-210ENST00000487899 CYP2C8P10632 490 aa13.71□□□□□ -0.21
RAB11FIP3-210ENST00000487899 BCRP11274 1271 aa13.71□□□□□ -0.21
RAB11FIP3-210ENST00000487899 PLCG2P16885 1265 aa13.71□□□□□ -0.21
RAB11FIP3-210ENST00000487899 METTL16Q86W50 562 aaKnown RBP13.71□□□□□ -0.21
RAB11FIP3-210ENST00000487899 MAPKAPK5Q8IW41 473 aa13.71□□□□□ -0.21
RAB11FIP3-210ENST00000487899 TGFBRAP1Q8WUH2 860 aa13.71□□□□□ -0.21
RAB11FIP3-210ENST00000487899 ZNF333Q96JL9 665 aa13.71□□□□□ -0.21
RAB11FIP3-210ENST00000487899 TRIM47Q96LD4 638 aa13.71□□□□□ -0.21
RAB11FIP3-210ENST00000487899 HERC5Q9UII4 1024 aaKnown RBP13.71□□□□□ -0.21
RAB11FIP3-210ENST00000487899 ALPK3Q96L96 1907 aa13.7□□□□□ -0.22
RAB11FIP3-210ENST00000487899 IDH1O75874 414 aaKnown RBP13.7□□□□□ -0.22
RAB11FIP3-210ENST00000487899 BAG3O95817 575 aa13.7□□□□□ -0.22
RAB11FIP3-210ENST00000487899 DYNLL1P63167 89 aaKnown RBP13.7□□□□□ -0.22
RAB11FIP3-210ENST00000487899 SHROOM1Q2M3G4 852 aaPredicted RBP13.7□□□□□ -0.22
RAB11FIP3-210ENST00000487899 NOL10Q9BSC4 688 aaKnown RBP13.7□□□□□ -0.22
RAB11FIP3-210ENST00000487899 CAP2P40123 477 aa13.69□□□□□ -0.22
RAB11FIP3-210ENST00000487899 JAG1P78504 1218 aa13.69□□□□□ -0.22
RAB11FIP3-210ENST00000487899 SLC9C1Q4G0N8 1177 aa13.69□□□□□ -0.22
RAB11FIP3-210ENST00000487899 HSP90AB4PQ58FF6 505 aa13.69□□□□□ -0.22
RAB11FIP3-210ENST00000487899 TREML2Q5T2D2 321 aa13.69□□□□□ -0.22
RAB11FIP3-210ENST00000487899 PRPF38BQ5VTL8 546 aaKnown RBP13.69□□□□□ -0.22
RAB11FIP3-210ENST00000487899 GADL1Q6ZQY3 521 aa13.69□□□□□ -0.22
RAB11FIP3-210ENST00000487899 RPAP2Q8IXW5 612 aaPredicted RBP13.69□□□□□ -0.22
RAB11FIP3-210ENST00000487899 MAGEB6Q8N7X4 407 aa13.69□□□□□ -0.22
RAB11FIP3-210ENST00000487899 MIGA1Q8NAN2 632 aa13.69□□□□□ -0.22
RAB11FIP3-210ENST00000487899 KIF1BPQ96EK5 621 aa13.69□□□□□ -0.22
RAB11FIP3-210ENST00000487899 DHX36Q9H2U1 1008 aaKnown RBP13.69□□□□□ -0.22
RAB11FIP3-210ENST00000487899 AGTPBP1Q9UPW5 1226 aa13.69□□□□□ -0.22
RAB11FIP3-210ENST00000487899 SLC45A1Q9Y2W3 748 aa13.69□□□□□ -0.22
RAB11FIP3-210ENST00000487899 APBB1O00213 710 aa13.68□□□□□ -0.22
RAB11FIP3-210ENST00000487899 OSBPP22059 807 aa13.68□□□□□ -0.22
RAB11FIP3-210ENST00000487899 CYP7A1P22680 504 aa13.68□□□□□ -0.22
RAB11FIP3-210ENST00000487899 FASTKD5Q7L8L6 764 aaKnown RBP13.68□□□□□ -0.22
RAB11FIP3-210ENST00000487899 RIOK1Q9BRS2 568 aaKnown RBP13.68□□□□□ -0.22
RAB11FIP3-210ENST00000487899 PI4KBQ9UBF8 816 aa13.68□□□□□ -0.22
RAB11FIP3-210ENST00000487899 PALD1Q9ULE6 856 aa13.68□□□□□ -0.22
RAB11FIP3-210ENST00000487899 COL11A1P12107 1806 aaPredicted RBP13.68□□□□□ -0.22
RAB11FIP3-210ENST00000487899 HMMRO75330 724 aa13.67□□□□□ -0.22
RAB11FIP3-210ENST00000487899 ECM2O94769 699 aaPredicted RBP13.67□□□□□ -0.22
RAB11FIP3-210ENST00000487899 GNRH1P01148 92 aa13.67□□□□□ -0.22
RAB11FIP3-210ENST00000487899 PSMC4P43686 418 aa13.67□□□□□ -0.22
RAB11FIP3-210ENST00000487899 PDE3AQ14432 1141 aa13.67□□□□□ -0.22
RAB11FIP3-210ENST00000487899 KIF22Q14807 665 aa13.67□□□□□ -0.22
RAB11FIP3-210ENST00000487899 ARHGEF6Q15052 776 aa13.67□□□□□ -0.22
RAB11FIP3-210ENST00000487899 SLC4A8Q2Y0W8 1093 aa13.67□□□□□ -0.22
RAB11FIP3-210ENST00000487899 PROCA1Q8NCQ7 364 aaPredicted RBP13.67□□□□□ -0.22
RAB11FIP3-210ENST00000487899 ZNF280CQ8ND82 737 aa13.67□□□□□ -0.22
RAB11FIP3-210ENST00000487899 SH3TC2Q8TF17 1288 aa13.67□□□□□ -0.22
RAB11FIP3-210ENST00000487899 SRRDQ9UH36 339 aa13.67□□□□□ -0.22
RAB11FIP3-210ENST00000487899 SAP30BPQ9UHR5 308 aaKnown RBP13.67□□□□□ -0.22
RAB11FIP3-210ENST00000487899 TCRBV5S4A2TA0A5A2 114 aa13.66□□□□□ -0.22
RAB11FIP3-210ENST00000487899 GDF11O95390 407 aa13.66□□□□□ -0.22
RAB11FIP3-210ENST00000487899 PDE6AP16499 860 aa13.66□□□□□ -0.22
RAB11FIP3-210ENST00000487899 HMGCS2P54868 508 aa13.66□□□□□ -0.22
RAB11FIP3-210ENST00000487899 SPP2Q13103 211 aa13.66□□□□□ -0.22
RAB11FIP3-210ENST00000487899 TMED8Q6PL24 325 aaPredicted RBP13.66□□□□□ -0.22
RAB11FIP3-210ENST00000487899 CLASRPQ8N2M8 674 aaKnown RBP13.66□□□□□ -0.22
RAB11FIP3-210ENST00000487899 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.66□□□□□ -0.22
RAB11FIP3-210ENST00000487899 EDC3Q96F86 508 aaKnown RBP13.66□□□□□ -0.22
RAB11FIP3-210ENST00000487899 TBC1D2Q9BYX2 928 aa13.66□□□□□ -0.22
RAB11FIP3-210ENST00000487899 ZBTB21Q9ULJ3 1066 aa13.66□□□□□ -0.22
RAB11FIP3-210ENST00000487899 ZNF236Q9UL36 1845 aa13.66□□□□□ -0.22
RAB11FIP3-210ENST00000487899 MYPNQ86TC9 1320 aa13.65□□□□□ -0.22
RAB11FIP3-210ENST00000487899 MYH4Q9Y623 1939 aa13.65□□□□□ -0.22
RAB11FIP3-210ENST00000487899 PRMT2P55345 433 aa13.65□□□□□ -0.22
RAB11FIP3-210ENST00000487899 EVX2Q03828 476 aa13.65□□□□□ -0.22
RAB11FIP3-210ENST00000487899 MAP3K12Q12852 859 aa13.65□□□□□ -0.22
RAB11FIP3-210ENST00000487899 MTMR2Q13614 643 aa13.65□□□□□ -0.22
RAB11FIP3-210ENST00000487899 SH3D19Q5HYK7 790 aa13.65□□□□□ -0.22
RAB11FIP3-210ENST00000487899 CERS3Q8IU89 383 aa13.65□□□□□ -0.22
RAB11FIP3-210ENST00000487899 EHD4Q9H223 541 aa13.65□□□□□ -0.22
RAB11FIP3-210ENST00000487899 RANBP2P49792 3224 aaKnown RBP13.65□□□□□ -0.22
RAB11FIP3-210ENST00000487899 DNAH12Q6ZR08 3092 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms