RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 WDR64B1ANS9 1081 aa6.77□□□□□ -1.33
TTC3-220ENST00000487711 GFRA2O00451 464 aa6.77□□□□□ -1.33
TTC3-220ENST00000487711 CILPO75339 1184 aa6.77□□□□□ -1.33
TTC3-220ENST00000487711 ITGB7P26010 798 aa6.77□□□□□ -1.33
TTC3-220ENST00000487711 GRK4P32298 578 aa6.77□□□□□ -1.33
TTC3-220ENST00000487711 ZNF394Q53GI3 561 aa6.77□□□□□ -1.33
TTC3-220ENST00000487711 C9orf131Q5VYM1 1079 aa6.77□□□□□ -1.33
TTC3-220ENST00000487711 ZNF507Q8TCN5 953 aa6.77□□□□□ -1.33
TTC3-220ENST00000487711 ZNF296Q8WUU4 475 aaPredicted RBP6.77□□□□□ -1.33
TTC3-220ENST00000487711 ADAMTS1Q9UHI8 967 aa6.77□□□□□ -1.33
TTC3-220ENST00000487711 PCDHGB7Q9Y5F8 929 aa6.77□□□□□ -1.33
TTC3-220ENST00000487711 TLR3O15455 904 aaKnown RBP6.76□□□□□ -1.33
TTC3-220ENST00000487711 GARTP22102 1010 aa6.76□□□□□ -1.33
TTC3-220ENST00000487711 NTF4P34130 210 aa6.76□□□□□ -1.33
TTC3-220ENST00000487711 ADMP35318 185 aa6.76□□□□□ -1.33
TTC3-220ENST00000487711 CDK5R2Q13319 367 aa6.76□□□□□ -1.33
TTC3-220ENST00000487711 SEZ6L2Q6UXD5 910 aa6.76□□□□□ -1.33
TTC3-220ENST00000487711 FAM196AQ6ZSG2 479 aa6.76□□□□□ -1.33
TTC3-220ENST00000487711 ZAR1Q86SH2 424 aa6.76□□□□□ -1.33
TTC3-220ENST00000487711 KCT2Q8NC54 265 aa6.76□□□□□ -1.33
TTC3-220ENST00000487711 SHKBP1Q8TBC3 707 aa6.76□□□□□ -1.33
TTC3-220ENST00000487711 WNT10AQ9GZT5 417 aa6.76□□□□□ -1.33
TTC3-220ENST00000487711 C1GALT1Q9NS00 363 aa6.76□□□□□ -1.33
TTC3-220ENST00000487711 ATG3Q9NT62 314 aa6.76□□□□□ -1.33
TTC3-220ENST00000487711 TACC3Q9Y6A5 838 aa6.76□□□□□ -1.33
TTC3-220ENST00000487711 HDLBPQ00341 1268 aaKnown RBP6.75□□□□□ -1.33
TTC3-220ENST00000487711 PDE4BQ07343 736 aa6.75□□□□□ -1.33
TTC3-220ENST00000487711 MPP2Q14168 576 aa6.75□□□□□ -1.33
TTC3-220ENST00000487711 UBE3DQ7Z6J8 389 aa6.75□□□□□ -1.33
TTC3-220ENST00000487711 NT5DC4Q86YG4 428 aa6.75□□□□□ -1.33
TTC3-220ENST00000487711 KIAA0825Q8IV33 1275 aa6.75□□□□□ -1.33
TTC3-220ENST00000487711 FBXO27Q8NI29 283 aa6.75□□□□□ -1.33
TTC3-220ENST00000487711 SPON2Q9BUD6 331 aa6.75□□□□□ -1.33
TTC3-220ENST00000487711 OSBPL1AQ9BXW6 950 aa6.75□□□□□ -1.33
TTC3-220ENST00000487711 KCNQ5Q9NR82 932 aa6.75□□□□□ -1.33
TTC3-220ENST00000487711 F13BP05160 661 aa6.74□□□□□ -1.33
TTC3-220ENST00000487711 PGRP06401 933 aa6.74□□□□□ -1.33
TTC3-220ENST00000487711 CWF19L2Q2TBE0 894 aaKnown RBP6.74□□□□□ -1.33
TTC3-220ENST00000487711 METTL16Q86W50 562 aaKnown RBP6.74□□□□□ -1.33
TTC3-220ENST00000487711 ZDHHC13Q8IUH4 622 aa6.74□□□□□ -1.33
TTC3-220ENST00000487711 HID1Q8IV36 788 aa6.74□□□□□ -1.33
TTC3-220ENST00000487711 SHISA5Q8N114 240 aa6.74□□□□□ -1.33
TTC3-220ENST00000487711 FBRSQ9HAH7 460 aa6.74□□□□□ -1.33
TTC3-220ENST00000487711 DDX41Q9UJV9 622 aaKnown RBP6.74□□□□□ -1.33
TTC3-220ENST00000487711 ROBO2Q9HCK4 1378 aa6.73□□□□□ -1.33
TTC3-220ENST00000487711 FAM170BA6NMN3 283 aa6.73□□□□□ -1.33
TTC3-220ENST00000487711 E9PSI1 815 aa6.73□□□□□ -1.33
TTC3-220ENST00000487711 GRIN3BO60391 1043 aa6.73□□□□□ -1.33
TTC3-220ENST00000487711 GREM1O60565 184 aa6.73□□□□□ -1.33
TTC3-220ENST00000487711 FAM87AP0C7U9 286 aa6.73□□□□□ -1.33
TTC3-220ENST00000487711 CYP27A1Q02318 531 aa6.73□□□□□ -1.33
TTC3-220ENST00000487711 APOBRQ0VD83 1088 aa6.73□□□□□ -1.33
TTC3-220ENST00000487711 DUSP27Q5VZP5 1158 aa6.73□□□□□ -1.33
TTC3-220ENST00000487711 REC114Q7Z4M0 266 aa6.73□□□□□ -1.33
TTC3-220ENST00000487711 ZNF654Q8IZM8 581 aa6.73□□□□□ -1.33
TTC3-220ENST00000487711 GATA6Q92908 595 aa6.73□□□□□ -1.33
TTC3-220ENST00000487711 METTL22Q9BUU2 404 aaPredicted RBP6.73□□□□□ -1.33
TTC3-220ENST00000487711 UBP1Q9NZI7 540 aa6.73□□□□□ -1.33
TTC3-220ENST00000487711 TGFB1P01137 390 aa6.72□□□□□ -1.33
TTC3-220ENST00000487711 PLCG1P19174 1290 aa6.72□□□□□ -1.33
TTC3-220ENST00000487711 CRKP46108 304 aa6.72□□□□□ -1.33
TTC3-220ENST00000487711 RACK1P63244 317 aaKnown RBP6.72□□□□□ -1.33
TTC3-220ENST00000487711 NKG7Q16617 165 aa6.72□□□□□ -1.33
TTC3-220ENST00000487711 SEZ6Q53EL9 994 aa6.72□□□□□ -1.33
TTC3-220ENST00000487711 OGFOD3Q6PK18 319 aa6.72□□□□□ -1.33
TTC3-220ENST00000487711 ZNF765Q7L2R6 523 aa6.72□□□□□ -1.33
TTC3-220ENST00000487711 ARMCX6Q7L4S7 300 aa6.72□□□□□ -1.33
TTC3-220ENST00000487711 TOP6BLQ8N6T0 577 aa6.72□□□□□ -1.33
TTC3-220ENST00000487711 LEMD3Q9Y2U8 911 aa6.72□□□□□ -1.33
TTC3-220ENST00000487711 CORINQ9Y5Q5 1042 aa6.72□□□□□ -1.33
TTC3-220ENST00000487711 TCF3P15923 654 aa6.71□□□□□ -1.34
TTC3-220ENST00000487711 SLBPQ14493 270 aaKnown RBP eCLIP6.71□□□□□ -1.34
TTC3-220ENST00000487711 CPSF6Q16630 551 aaKnown RBP eCLIP6.71□□□□□ -1.34
TTC3-220ENST00000487711 CYP27C1Q4G0S4 372 aa6.71□□□□□ -1.34
TTC3-220ENST00000487711 ZMYM1Q5SVZ6 1142 aa6.71□□□□□ -1.34
TTC3-220ENST00000487711 PSMG3-AS1Q96PY0 264 aa6.71□□□□□ -1.34
TTC3-220ENST00000487711 DUSP23Q9BVJ7 150 aa6.71□□□□□ -1.34
TTC3-220ENST00000487711 NT5C1AQ9BXI3 368 aa6.71□□□□□ -1.34
TTC3-220ENST00000487711 LRRC3Q9BY71 257 aa6.71□□□□□ -1.34
TTC3-220ENST00000487711 FOXQ1Q9C009 403 aa6.71□□□□□ -1.34
TTC3-220ENST00000487711 PRDM10Q9NQV6 1147 aa6.71□□□□□ -1.34
TTC3-220ENST00000487711 PIM2Q9P1W9 311 aa6.71□□□□□ -1.34
TTC3-220ENST00000487711 ADAM30Q9UKF2 790 aa6.71□□□□□ -1.34
TTC3-220ENST00000487711 RNF112Q9ULX5 631 aa6.71□□□□□ -1.34
TTC3-220ENST00000487711 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.71□□□□□ -1.34
TTC3-220ENST00000487711 POLR3KQ9Y2Y1 108 aaPredicted RBP6.71□□□□□ -1.34
TTC3-220ENST00000487711 PRR19A6NJB7 356 aa6.7□□□□□ -1.34
TTC3-220ENST00000487711 LEFTY1O75610 366 aa6.7□□□□□ -1.34
TTC3-220ENST00000487711 LRIG2O94898 1065 aa6.7□□□□□ -1.34
TTC3-220ENST00000487711 MCM4P33991 863 aa6.7□□□□□ -1.34
TTC3-220ENST00000487711 PRAMEF13Q5VWM6 474 aa6.7□□□□□ -1.34
TTC3-220ENST00000487711 XAGE3Q8WTP9 111 aa6.7□□□□□ -1.34
TTC3-220ENST00000487711 NKD1Q969G9 470 aa6.7□□□□□ -1.34
TTC3-220ENST00000487711 EAF1Q96JC9 268 aaPredicted RBP6.7□□□□□ -1.34
TTC3-220ENST00000487711 TMEM87BQ96K49 555 aa6.7□□□□□ -1.34
TTC3-220ENST00000487711 DPH2Q9BQC3 489 aaPredicted RBP6.7□□□□□ -1.34
TTC3-220ENST00000487711 LRRC4CQ9HCJ2 640 aa6.7□□□□□ -1.34
TTC3-220ENST00000487711 BRMS1Q9HCU9 246 aa6.7□□□□□ -1.34
TTC3-220ENST00000487711 TJP2Q9UDY2 1190 aa6.7□□□□□ -1.34
TTC3-220ENST00000487711 HTR3BO95264 441 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms