RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 ADGRA2Q96PE1 1338 aa15.19■□□□□ 0.02
SREBF1-215ENST00000487401 MYCP01106 439 aaPredicted RBP15.19■□□□□ 0.02
SREBF1-215ENST00000487401 EN2P19622 333 aaPredicted RBP15.19■□□□□ 0.02
SREBF1-215ENST00000487401 FCGRTP55899 365 aa15.19■□□□□ 0.02
SREBF1-215ENST00000487401 ZNF280CQ8ND82 737 aa15.19■□□□□ 0.02
SREBF1-215ENST00000487401 RAET1EQ8TD07 263 aa15.19■□□□□ 0.02
SREBF1-215ENST00000487401 SMCR8Q8TEV9 937 aaPredicted RBP15.19■□□□□ 0.02
SREBF1-215ENST00000487401 SH3TC2Q8TF17 1288 aa15.19■□□□□ 0.02
SREBF1-215ENST00000487401 TBC1D2Q9BYX2 928 aa15.19■□□□□ 0.02
SREBF1-215ENST00000487401 CHMP4BQ9H444 224 aaKnown RBP15.19■□□□□ 0.02
SREBF1-215ENST00000487401 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.19■□□□□ 0.02
SREBF1-215ENST00000487401 USP17L5A8MUK1 530 aa15.18■□□□□ 0.02
SREBF1-215ENST00000487401 HMMRO75330 724 aa15.18■□□□□ 0.02
SREBF1-215ENST00000487401 BCRP11274 1271 aa15.18■□□□□ 0.02
SREBF1-215ENST00000487401 OSBPP22059 807 aa15.18■□□□□ 0.02
SREBF1-215ENST00000487401 CAP2P40123 477 aa15.18■□□□□ 0.02
SREBF1-215ENST00000487401 SPP2Q13103 211 aa15.18■□□□□ 0.02
SREBF1-215ENST00000487401 ADGRA1Q86SQ6 560 aa15.18■□□□□ 0.02
SREBF1-215ENST00000487401 FOXP4Q8IVH2 680 aaPredicted RBP15.18■□□□□ 0.02
SREBF1-215ENST00000487401 RPAP2Q8IXW5 612 aaPredicted RBP15.18■□□□□ 0.02
SREBF1-215ENST00000487401 CRACR2BQ8N4Y2 399 aaPredicted RBP15.18■□□□□ 0.02
SREBF1-215ENST00000487401 AS3MTQ9HBK9 375 aa15.18■□□□□ 0.02
SREBF1-215ENST00000487401 DDX19BQ9UMR2 479 aa15.18■□□□□ 0.02
SREBF1-215ENST00000487401 AGTPBP1Q9UPW5 1226 aa15.18■□□□□ 0.02
SREBF1-215ENST00000487401 COG6Q9Y2V7 657 aa15.18■□□□□ 0.02
SREBF1-215ENST00000487401 FLT1P17948 1338 aa15.17■□□□□ 0.02
SREBF1-215ENST00000487401 OTOFQ9HC10 1997 aa15.17■□□□□ 0.02
SREBF1-215ENST00000487401 COL2A1P02458 1487 aaPredicted RBP15.17■□□□□ 0.02
SREBF1-215ENST00000487401 APBB1O00213 710 aa15.17■□□□□ 0.02
SREBF1-215ENST00000487401 HLA-DOAP06340 250 aa15.17■□□□□ 0.02
SREBF1-215ENST00000487401 CTGFP29279 349 aa15.17■□□□□ 0.02
SREBF1-215ENST00000487401 DYNLL1P63167 89 aaKnown RBP15.17■□□□□ 0.02
SREBF1-215ENST00000487401 MAP3K12Q12852 859 aa15.17■□□□□ 0.02
SREBF1-215ENST00000487401 PABPC4Q13310 644 aaKnown RBP eCLIP15.17■□□□□ 0.02
SREBF1-215ENST00000487401 CERS3Q8IU89 383 aa15.17■□□□□ 0.02
SREBF1-215ENST00000487401 MAGEB6Q8N7X4 407 aa15.17■□□□□ 0.02
SREBF1-215ENST00000487401 RHPN1Q8TCX5 695 aa15.17■□□□□ 0.02
SREBF1-215ENST00000487401 IL1RAPL2Q9NP60 686 aa15.17■□□□□ 0.02
SREBF1-215ENST00000487401 BIN2Q9UBW5 565 aaPredicted RBP15.17■□□□□ 0.02
SREBF1-215ENST00000487401 SAP30BPQ9UHR5 308 aaKnown RBP15.17■□□□□ 0.02
SREBF1-215ENST00000487401 RCAN3Q9UKA8 241 aa15.17■□□□□ 0.02
SREBF1-215ENST00000487401 PNMA3Q9UL41 463 aa15.17■□□□□ 0.02
SREBF1-215ENST00000487401 MYPNQ86TC9 1320 aa15.17■□□□□ 0.02
SREBF1-215ENST00000487401 USP5P45974 858 aa15.16■□□□□ 0.02
SREBF1-215ENST00000487401 RRP1BQ14684 758 aaKnown RBP15.16■□□□□ 0.02
SREBF1-215ENST00000487401 CLASRPQ8N2M8 674 aaKnown RBP15.16■□□□□ 0.02
SREBF1-215ENST00000487401 MIGA1Q8NAN2 632 aa15.16■□□□□ 0.02
SREBF1-215ENST00000487401 PROCA1Q8NCQ7 364 aaPredicted RBP15.16■□□□□ 0.02
SREBF1-215ENST00000487401 KIF1BPQ96EK5 621 aa15.16■□□□□ 0.02
SREBF1-215ENST00000487401 BCL11AQ9H165 835 aa15.16■□□□□ 0.02
SREBF1-215ENST00000487401 PALD1Q9ULE6 856 aa15.16■□□□□ 0.02
SREBF1-215ENST00000487401 NDUFB9Q9Y6M9 179 aa15.16■□□□□ 0.02
SREBF1-215ENST00000487401 ASNSP08243 561 aa15.15■□□□□ 0.02
SREBF1-215ENST00000487401 IFIT2P09913 472 aaKnown RBP15.15■□□□□ 0.02
SREBF1-215ENST00000487401 GRK4P32298 578 aa15.15■□□□□ 0.02
SREBF1-215ENST00000487401 HMGCS2P54868 508 aa15.15■□□□□ 0.02
SREBF1-215ENST00000487401 TREML2Q5T2D2 321 aa15.15■□□□□ 0.02
SREBF1-215ENST00000487401 TMED8Q6PL24 325 aaPredicted RBP15.15■□□□□ 0.02
SREBF1-215ENST00000487401 ANTXR1Q9H6X2 564 aa15.15■□□□□ 0.02
SREBF1-215ENST00000487401 ZBTB40Q9NUA8 1239 aa15.15■□□□□ 0.02
SREBF1-215ENST00000487401 HTTP42858 3142 aa15.14■□□□□ 0.01
SREBF1-215ENST00000487401 RAB11FIP3O75154 756 aa15.14■□□□□ 0.01
SREBF1-215ENST00000487401 UBXN2AP68543 259 aa15.14■□□□□ 0.01
SREBF1-215ENST00000487401 PRKCZQ05513 592 aa15.14■□□□□ 0.01
SREBF1-215ENST00000487401 TTF1Q15361 905 aaPredicted RBP15.14■□□□□ 0.01
SREBF1-215ENST00000487401 METTL16Q86W50 562 aaKnown RBP15.14■□□□□ 0.01
SREBF1-215ENST00000487401 WDR18Q9BV38 432 aa15.14■□□□□ 0.01
SREBF1-215ENST00000487401 GINM1Q9NU53 330 aa15.14■□□□□ 0.01
SREBF1-215ENST00000487401 TMOD4Q9NZQ9 345 aa15.14■□□□□ 0.01
SREBF1-215ENST00000487401 TNRC18O15417 2968 aaPredicted RBP15.13■□□□□ 0.01
SREBF1-215ENST00000487401 TNPO2O14787 897 aaKnown RBP15.13■□□□□ 0.01
SREBF1-215ENST00000487401 GCLCP48506 637 aaPredicted RBP15.13■□□□□ 0.01
SREBF1-215ENST00000487401 ANKRD13CQ8N6S4 541 aa15.13■□□□□ 0.01
SREBF1-215ENST00000487401 GDF11O95390 407 aa15.12■□□□□ 0.01
SREBF1-215ENST00000487401 BACE1P56817 501 aa15.12■□□□□ 0.01
SREBF1-215ENST00000487401 MTMR2Q13614 643 aa15.12■□□□□ 0.01
SREBF1-215ENST00000487401 MTFR1Q15390 333 aa15.12■□□□□ 0.01
SREBF1-215ENST00000487401 SH3D19Q5HYK7 790 aa15.12■□□□□ 0.01
SREBF1-215ENST00000487401 TTC6Q86TZ1 520 aa15.12■□□□□ 0.01
SREBF1-215ENST00000487401 SIRT2Q8IXJ6 389 aa15.12■□□□□ 0.01
SREBF1-215ENST00000487401 SLAIN1Q8ND83 568 aa15.12■□□□□ 0.01
SREBF1-215ENST00000487401 COA7Q96BR5 231 aa15.12■□□□□ 0.01
SREBF1-215ENST00000487401 DNAJC2Q99543 621 aaKnown RBP15.12■□□□□ 0.01
SREBF1-215ENST00000487401 GABRQQ9UN88 632 aa15.12■□□□□ 0.01
SREBF1-215ENST00000487401 MAGEB6P1A0A0J9YX57 407 aa15.11■□□□□ 0.01
SREBF1-215ENST00000487401 C19orf81C9J6K1 198 aa15.11■□□□□ 0.01
SREBF1-215ENST00000487401 USP17L10C9JJH3 530 aa15.11■□□□□ 0.01
SREBF1-215ENST00000487401 FLT3LGP49771 235 aa15.11■□□□□ 0.01
SREBF1-215ENST00000487401 IRX3P78415 501 aaPredicted RBP15.11■□□□□ 0.01
SREBF1-215ENST00000487401 FAM110CQ1W6H9 321 aa15.11■□□□□ 0.01
SREBF1-215ENST00000487401 SLC9C2Q5TAH2 1124 aa15.11■□□□□ 0.01
SREBF1-215ENST00000487401 NKX2-3Q8TAU0 364 aa15.11■□□□□ 0.01
SREBF1-215ENST00000487401 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.11■□□□□ 0.01
SREBF1-215ENST00000487401 ASCC2Q9H1I8 757 aaPredicted RBP15.11■□□□□ 0.01
SREBF1-215ENST00000487401 DNAJC18Q9H819 358 aa15.11■□□□□ 0.01
SREBF1-215ENST00000487401 TAOK2Q9UL54 1235 aa15.11■□□□□ 0.01
SREBF1-215ENST00000487401 ZBTB21Q9ULJ3 1066 aa15.11■□□□□ 0.01
SREBF1-215ENST00000487401 LAMB1P07942 1786 aa15.11■□□□□ 0.01
SREBF1-215ENST00000487401 GOLIM4O00461 696 aa15.1■□□□□ 0.01
SREBF1-215ENST00000487401 ADCY3O60266 1144 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms