RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 ASIC2Q16515 512 aa9.78□□□□□ -0.84
GABRE-209ENST00000486255 NAA16Q6N069 864 aaPredicted RBP9.78□□□□□ -0.84
GABRE-209ENST00000486255 SPATS2Q86XZ4 545 aaKnown RBP9.78□□□□□ -0.84
GABRE-209ENST00000486255 LEO1Q8WVC0 666 aaPredicted RBP9.78□□□□□ -0.84
GABRE-209ENST00000486255 MPHOSPH6Q99547 160 aaKnown RBP9.78□□□□□ -0.84
GABRE-209ENST00000486255 THEGQ9P2T0 379 aa9.78□□□□□ -0.84
GABRE-209ENST00000486255 PHF8Q9UPP1 1060 aa9.78□□□□□ -0.84
GABRE-209ENST00000486255 DIP2BQ9P265 1576 aa9.78□□□□□ -0.84
GABRE-209ENST00000486255 KIAA1210Q9ULL0 1709 aa9.78□□□□□ -0.84
GABRE-209ENST00000486255 SF3A3Q12874 501 aaKnown RBP eCLIP9.78□□□□□ -0.843e-6■■■□□ 16.5
GABRE-209ENST00000486255 PAK2Q13177 524 aa9.78□□□□□ -0.84
GABRE-209ENST00000486255 UBL4BQ8N7F7 174 aa9.78□□□□□ -0.84
GABRE-209ENST00000486255 BAG2O95816 211 aa9.78□□□□□ -0.84
GABRE-209ENST00000486255 CCT6AP40227 531 aaKnown RBP9.78□□□□□ -0.84
GABRE-209ENST00000486255 DBN1Q16643 649 aa9.78□□□□□ -0.84
GABRE-209ENST00000486255 SEPT10Q9P0V9 454 aa9.78□□□□□ -0.84
GABRE-209ENST00000486255 LARSQ9P2J5 1176 aaKnown RBP9.78□□□□□ -0.84
GABRE-209ENST00000486255 PPP1R9AQ9ULJ8 1098 aa9.78□□□□□ -0.84
GABRE-209ENST00000486255 ACEP12821 1306 aa9.78□□□□□ -0.84
GABRE-209ENST00000486255 IRX5P78411 483 aaPredicted RBP9.77□□□□□ -0.84
GABRE-209ENST00000486255 STAG1Q8WVM7 1258 aa9.77□□□□□ -0.84
GABRE-209ENST00000486255 THUMPD2Q9BTF0 503 aaKnown RBP9.77□□□□□ -0.84
GABRE-209ENST00000486255 CARD14Q9BXL6 1004 aa9.77□□□□□ -0.84
GABRE-209ENST00000486255 LRRC2Q9BYS8 371 aa9.77□□□□□ -0.84
GABRE-209ENST00000486255 SPOPO43791 374 aa9.77□□□□□ -0.85
GABRE-209ENST00000486255 KRT5P13647 590 aa9.77□□□□□ -0.85
GABRE-209ENST00000486255 GNGT1P63211 74 aa9.77□□□□□ -0.85
GABRE-209ENST00000486255 MGARPQ8TDB4 240 aa9.77□□□□□ -0.85
GABRE-209ENST00000486255 SECISBP2LQ93073 1101 aaKnown RBP9.77□□□□□ -0.85
GABRE-209ENST00000486255 FAM212AQ96EL1 285 aa9.77□□□□□ -0.85
GABRE-209ENST00000486255 RILPQ96NA2 401 aa9.77□□□□□ -0.85
GABRE-209ENST00000486255 MSH6P52701 1360 aa9.77□□□□□ -0.85
GABRE-209ENST00000486255 HIP1RO75146 1068 aa9.77□□□□□ -0.85
GABRE-209ENST00000486255 ECM2O94769 699 aaPredicted RBP9.77□□□□□ -0.85
GABRE-209ENST00000486255 VWA3BQ502W6 1294 aa9.77□□□□□ -0.85
GABRE-209ENST00000486255 SEPT8Q92599 483 aa9.77□□□□□ -0.85
GABRE-209ENST00000486255 KIFAP3Q92845 792 aa9.77□□□□□ -0.85
GABRE-209ENST00000486255 CALM1P0DP23 149 aa9.77□□□□□ -0.85
GABRE-209ENST00000486255 CALM2P0DP24 149 aa9.77□□□□□ -0.85
GABRE-209ENST00000486255 CALM3P0DP25 149 aa9.77□□□□□ -0.85
GABRE-209ENST00000486255 TRIM27P14373 513 aa9.77□□□□□ -0.85
GABRE-209ENST00000486255 DCAF17Q5H9S7 520 aaPredicted RBP9.77□□□□□ -0.85
GABRE-209ENST00000486255 PDCD7Q8N8D1 485 aaKnown RBP9.77□□□□□ -0.85
GABRE-209ENST00000486255 TNFAIP3P21580 790 aa9.77□□□□□ -0.85
GABRE-209ENST00000486255 MYL5Q02045 173 aa9.77□□□□□ -0.85
GABRE-209ENST00000486255 IGSF22Q8N9C0 903 aa9.77□□□□□ -0.85
GABRE-209ENST00000486255 ZNF622Q969S3 477 aaKnown RBP eCLIP9.77□□□□□ -0.853e-7■□□□□ 10.5
GABRE-209ENST00000486255 NOX5Q96PH1 765 aa9.77□□□□□ -0.85
GABRE-209ENST00000486255 ESYT1Q9BSJ8 1104 aa9.77□□□□□ -0.85
GABRE-209ENST00000486255 HAUS8Q9BT25 410 aa9.77□□□□□ -0.85
GABRE-209ENST00000486255 RBSNQ9H1K0 784 aa9.77□□□□□ -0.85
GABRE-209ENST00000486255 CNNM2Q9H8M5 875 aa9.77□□□□□ -0.85
GABRE-209ENST00000486255 TSPY3P0CV98 308 aa9.76□□□□□ -0.85
GABRE-209ENST00000486255 TSPY8P0CW00 308 aa9.76□□□□□ -0.85
GABRE-209ENST00000486255 TROVE2P10155 538 aaKnown RBP eCLIP9.76□□□□□ -0.85
GABRE-209ENST00000486255 SDSP20132 328 aa9.76□□□□□ -0.85
GABRE-209ENST00000486255 CNGA1P29973 690 aa9.76□□□□□ -0.85
GABRE-209ENST00000486255 CA8P35219 290 aa9.76□□□□□ -0.85
GABRE-209ENST00000486255 DENND2CQ68D51 928 aa9.76□□□□□ -0.85
GABRE-209ENST00000486255 TMTC2Q8N394 836 aa9.76□□□□□ -0.85
GABRE-209ENST00000486255 ABTB1Q969K4 478 aaPredicted RBP9.76□□□□□ -0.85
GABRE-209ENST00000486255 KIFC2Q96AC6 838 aa9.76□□□□□ -0.85
GABRE-209ENST00000486255 TBC1D31Q96DN5 1066 aa9.76□□□□□ -0.85
GABRE-209ENST00000486255 NOC4LQ9BVI4 516 aaKnown RBP9.76□□□□□ -0.85
GABRE-209ENST00000486255 ELP1O95163 1332 aa9.76□□□□□ -0.85
GABRE-209ENST00000486255 ARHGAP42A6NI28 874 aa9.76□□□□□ -0.85
GABRE-209ENST00000486255 RNF40O75150 1001 aa9.76□□□□□ -0.85
GABRE-209ENST00000486255 LCA5Q86VQ0 697 aa9.76□□□□□ -0.85
GABRE-209ENST00000486255 NCAPGQ9BPX3 1015 aa9.76□□□□□ -0.85
GABRE-209ENST00000486255 RBM8AQ9Y5S9 174 aaKnown RBP9.76□□□□□ -0.85
GABRE-209ENST00000486255 DNAJC8O75937 253 aaPredicted RBP9.76□□□□□ -0.85
GABRE-209ENST00000486255 CUL4BQ13620 913 aa9.76□□□□□ -0.85
GABRE-209ENST00000486255 SRGAP1Q7Z6B7 1085 aa9.76□□□□□ -0.85
GABRE-209ENST00000486255 TRIM31Q9BZY9 425 aa9.76□□□□□ -0.85
GABRE-209ENST00000486255 POLR1AO95602 1720 aaPredicted RBP9.76□□□□□ -0.85
GABRE-209ENST00000486255 ARHGEF40Q8TER5 1519 aa9.76□□□□□ -0.85
GABRE-209ENST00000486255 TRIM75PA6NK02 468 aa9.76□□□□□ -0.85
GABRE-209ENST00000486255 SESN3P58005 492 aa9.76□□□□□ -0.85
GABRE-209ENST00000486255 RASIP1Q5U651 963 aa9.76□□□□□ -0.85
GABRE-209ENST00000486255 CABP5Q9NP86 173 aa9.76□□□□□ -0.85
GABRE-209ENST00000486255 NAPAP54920 295 aa9.76□□□□□ -0.85
GABRE-209ENST00000486255 ANKRD20A3Q5VUR7 823 aa9.76□□□□□ -0.85
GABRE-209ENST00000486255 KLHL7Q8IXQ5 586 aa9.76□□□□□ -0.85
GABRE-209ENST00000486255 CRNKL1Q9BZJ0 848 aaKnown RBP9.76□□□□□ -0.85
GABRE-209ENST00000486255 IMPACTQ9P2X3 320 aa9.76□□□□□ -0.85
GABRE-209ENST00000486255 RTL9Q8NET4 1388 aa9.75□□□□□ -0.85
GABRE-209ENST00000486255 MRPL46Q9H2W6 279 aaKnown RBP9.75□□□□□ -0.85
GABRE-209ENST00000486255 MAP3K2Q9Y2U5 619 aa9.75□□□□□ -0.85
GABRE-209ENST00000486255 NCKAP5LQ9HCH0 1330 aa9.75□□□□□ -0.85
GABRE-209ENST00000486255 STK10O94804 968 aaKnown RBP9.75□□□□□ -0.85
GABRE-209ENST00000486255 BAG3O95817 575 aa9.75□□□□□ -0.85
GABRE-209ENST00000486255 HLA-DOAP06340 250 aa9.75□□□□□ -0.85
GABRE-209ENST00000486255 EPB41P11171 864 aaKnown RBP9.75□□□□□ -0.85
GABRE-209ENST00000486255 KRT9P35527 623 aa9.75□□□□□ -0.85
GABRE-209ENST00000486255 VPS41P49754 854 aa9.75□□□□□ -0.85
GABRE-209ENST00000486255 AMOTQ4VCS5 1084 aa9.75□□□□□ -0.85
GABRE-209ENST00000486255 RILPL1Q5EBL4 403 aa9.75□□□□□ -0.85
GABRE-209ENST00000486255 MRFAP1L1Q96HT8 127 aa9.75□□□□□ -0.85
GABRE-209ENST00000486255 HAUS7Q99871 368 aa9.75□□□□□ -0.85
GABRE-209ENST00000486255 AKNAD1Q5T1N1 836 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms